GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002700-TA|BGIBMGA002700-PA|IPR008266|Tyrosine protein
kinase, active site, IPR000719|Protein kinase, IPR001245|Tyrosine
protein kinase, IPR002290|Serine/threonine protein kinase,
IPR011009|Protein kinase-like
         (266 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    99   5e-23
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    55   8e-10
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    55   8e-10
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                50   2e-08
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    47   2e-07
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    34   0.002
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   2.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 98.7 bits (235), Expect = 5e-23
 Identities = 67/241 (27%), Positives = 107/241 (44%), Gaps = 10/241 (4%)

Query: 30  IRLEILIHEGTFGRIYKGVFK---KGDVYEEVMVKTXXXXXXXXXXXXXXXEGLRLYGLV 86
           I +E +I  G FG + +G  K    G    +V +KT               E   +    
Sbjct: 633 ITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSADKARNDFLTEASIMGQFE 692

Query: 87  HANVLTPMAACAEEARKPLLIYCCPSHSSNLKRFLSSCRLGQQSAPATRELVDLGAQVAC 146
           H NV+       +    P++I      + +L  FL +            +LV +   +A 
Sbjct: 693 HPNVIFLQGVVTKS--NPVMIITEFMENGSLDTFLRA----NDGKFQVLQLVGMLRGIAS 746

Query: 147 GLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDLFPDDYHCLGDNENR-PVKWMA 205
           G+ YL    +VH D+AARN +V+  L  K+ D GL+R++             + PV+W A
Sbjct: 747 GMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTA 806

Query: 206 PETLLQNQYSTASDVWSLGITLWELATLGSSPLAELDAADVGAFLNGGYRPSQPHNCPDE 265
           PE +   ++++ASDVWS+GI  WE+ + G  P       DV   +  GYR   P +CP+ 
Sbjct: 807 PEAIAFRKFTSASDVWSMGIVCWEVMSYGERPYWNWSNQDVIKSIEKGYRLPAPMDCPEA 866

Query: 266 L 266
           +
Sbjct: 867 I 867


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 54.8 bits (126), Expect = 8e-10
 Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 136 ELVDLGAQVACGLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDLFPDDYHCLGD 195
           E + +   V  G+ YLH Q  VH DV  +N ++D + R K+TD G        +   LG 
Sbjct: 698 ERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGS 753

Query: 196 NENRPVKWMAPETLLQNQYSTASDVWSLGITLWEL 230
               PV  MAPE LL   Y ++ DV++ GI  W L
Sbjct: 754 IVGTPVH-MAPE-LLSGHYDSSVDVYAFGILFWYL 786


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 54.8 bits (126), Expect = 8e-10
 Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 6/95 (6%)

Query: 136 ELVDLGAQVACGLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDLFPDDYHCLGD 195
           E + +   V  G+ YLH Q  VH DV  +N ++D + R K+TD G        +   LG 
Sbjct: 736 ERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFC----ITEVMMLGS 791

Query: 196 NENRPVKWMAPETLLQNQYSTASDVWSLGITLWEL 230
               PV  MAPE LL   Y ++ DV++ GI  W L
Sbjct: 792 IVGTPVH-MAPE-LLSGHYDSSVDVYAFGILFWYL 824


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 144 VACGLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDL-FPDDYHCLGDNENRPVK 202
           + C L + H    VHADV  +N ++ +  + K+TD G +  +  P++     D       
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEI----DKFYGTPG 219

Query: 203 WMAPETLLQNQYSTASDVWSLGITLWELATLGSSPLAELDAADVGAFLNGGYRPSQPHNC 262
           + APE + QN+ + A+D++SLGI  W++      P A L +  +      G+RP    N 
Sbjct: 220 YTAPEVIKQNRPTPAADIYSLGIVAWQM-LFRKLPFAGLHSHTIIYLSAKGHRPID-DNI 277

Query: 263 PDE 265
            DE
Sbjct: 278 DDE 280


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 47.2 bits (107), Expect = 2e-07
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 142 AQVACGLSYLHVQRFVHADVAARNCVVDEKLRLKVTDNGLARDLFPDDYHCLGDNENRPV 201
           A V     YLH +  ++ D+   N ++D +  +K+ D G A+ L  D           P 
Sbjct: 473 ACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRL--DHGRKTWTFCGTP- 529

Query: 202 KWMAPETLLQNQYSTASDVWSLGITLWELATLGSSP 237
           +++APE +L   +  ++D WSLG+ ++EL T G+ P
Sbjct: 530 EYVAPEVILNKGHDISADYWSLGVLMFELLT-GTPP 564


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 33.9 bits (74), Expect = 0.002
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 143 QVACGLSYLHVQRFVHADVAARNCVVDEKLR---LKVTDNGLARDLFPDDYHCLGDNENR 199
           Q+   + + H    VH D+   N ++  K +   +K+ D GLA ++  +     G     
Sbjct: 17  QILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGF-AGT 75

Query: 200 PVKWMAPETLLQNQYSTASDVWSLGITLWELATLGSSPLAELD 242
           P  +++PE L +  Y    D+W+ G+ L+ +  +G  P  + D
Sbjct: 76  P-GYLSPEVLKKEPYGKPVDIWACGVILY-ILLVGYPPFWDED 116


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 161 VAARNCVVDEKLRLKVTDNGLARDLFP 187
           V+A    +DE  RL V D+GL  +  P
Sbjct: 127 VSAHKIAIDEYERLWVLDSGLVNNTQP 153


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.135    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,765
Number of Sequences: 429
Number of extensions: 2826
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 266
length of database: 140,377
effective HSP length: 57
effective length of query: 209
effective length of database: 115,924
effective search space: 24228116
effective search space used: 24228116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)