GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002696-TA|BGIBMGA002696-PA|IPR002509|Polysaccharide
deacetylase
         (1612 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    27   1.4  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   4.2  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    25   4.2  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   4.2  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   4.2  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   7.3  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 1087 TPPPARRPVETYTARPVSADDYDD 1110
            TP    +PV T T+RP+  D  DD
Sbjct: 2297 TPMVPDKPVTTTTSRPIGTDTSDD 2320


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 159 ENISKRSDSGEEMEYYEADPEDVGVIDDHFIQDDVER 195
           + + K+ D G++ +   +D    G + D F+ D++ +
Sbjct: 62  QTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSK 98


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
            protein protein.
          Length = 371

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 12/97 (12%)

Query: 933  NESGPYTSAPPKYLNQTTLRPYTVRHRLAKPTTVPETSKQNHTQNRVRMRHPNIVAQKLT 992
            N+S   T+  P  +  +   P      +A PT +P  S             P +  +K +
Sbjct: 191  NKSASRTTTSPTKVKASKASPAAAPRSVATPTGIPTPS--------TSASPPTVNIKKES 242

Query: 993  TPRDSYNQETRFTKINHDGKTNSL--EPTENLSPVSY 1027
                SY      T   H   T+SL   P+ + SP++Y
Sbjct: 243  PQMQSYRPTGNITP--HGSNTSSLITTPSPSASPLAY 277


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 159 ENISKRSDSGEEMEYYEADPEDVGVIDDHFIQDDVER 195
           + + K+ D G++ +   +D    G + D F+ D++ +
Sbjct: 10  QTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSK 46


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.0 bits (52), Expect = 4.2
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 159 ENISKRSDSGEEMEYYEADPEDVGVIDDHFIQDDVER 195
           + + K+ D G++ +   +D    G + D F+ D++ +
Sbjct: 193 QTLGKQGDDGDDKDSITSDGGKNGKLSDKFLDDEMSK 229


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 7.3
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 620 IDQTKLKEENQRIVAVTPKPHLFASGTGGPLILS 653
           +D+ KL E  + I     KP +F     GPL LS
Sbjct: 419 LDEEKLPESGENIEINLIKPDIFDQWELGPLKLS 452


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 9.7
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 659 YINLEHFTEPQNRFSVTTRPYFATSVKPYEAH----VKSTQKPLTTITNEQLSALQQYWK 714
           Y N+  ++ P+   S T RP +A       A     V++T KP   +  +  S  Q+   
Sbjct: 391 YANMNSYSVPEPTISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTT 450

Query: 715 NNPTANP 721
            + T  P
Sbjct: 451 VSTTEAP 457


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,082
Number of Sequences: 317
Number of extensions: 19063
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 8
length of query: 1612
length of database: 114,650
effective HSP length: 66
effective length of query: 1546
effective length of database: 93,728
effective search space: 144903488
effective search space used: 144903488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 49 (23.8 bits)