GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002696-TA|BGIBMGA002696-PA|IPR002509|Polysaccharide
deacetylase
         (1612 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     27   3.0  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    27   5.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   9.2  
AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive ...    26   9.2  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 326 NGGFYNNSPRPNHEQIQSHYITSLHHINDGL 356
           N G  NNS   +H Q Q H+  + HHI  GL
Sbjct: 337 NSGSSNNSSSHSHSQAQPHH--NPHHIGLGL 365


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 586 AGTPLDAIRPKLKPPNFKDDRQLPITYSFTTPN 618
           AG   +   PK KP N +  RQL   Y  T PN
Sbjct: 234 AGLRRNMTLPKRKPSNLEIRRQLSFQYFSTHPN 266


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 9.2
 Identities = 13/37 (35%), Positives = 21/37 (56%)

Query: 480  QYTPAPKVIPKIVNSAVGSSSPANVGSVLPSSTLNYQ 516
            +Y PAP  I   V++A+  S   N+G++L +   N Q
Sbjct: 1101 KYKPAPLYILDEVDAALDLSHTQNIGNMLKAHFTNSQ 1137


>AF203334-1|AAF19829.1|  110|Anopheles gambiae immune-responsive
            serine protease-relatedprotein ISPR5 protein.
          Length = 110

 Score = 25.8 bits (54), Expect = 9.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 1312 NGCPITATFYVSHEWTDYSQVQNLYSAGHEMASH 1345
            +G  +  T Y++ +W   + V  +YS G + A H
Sbjct: 60   SGTGLYGTVYMTSDWRPVNFVVGIYSNGAQCAQH 93


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,718,255
Number of Sequences: 2123
Number of extensions: 76155
Number of successful extensions: 141
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 136
Number of HSP's gapped (non-prelim): 6
length of query: 1612
length of database: 516,269
effective HSP length: 73
effective length of query: 1539
effective length of database: 361,290
effective search space: 556025310
effective search space used: 556025310
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)