Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002695-TA|BGIBMGA002695-PA|IPR001159|Double-stranded RNA
binding
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen - A... 126 1e-27
UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gamb... 119 3e-25
UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia c... 110 1e-22
UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome sh... 106 2e-21
UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4; D... 103 1e-20
UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Stau... 101 6e-20
UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein Sta... 99 3e-19
UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n... 85 7e-15
UniRef50_Q94239 Cluster: Putative uncharacterized protein; n=2; ... 79 3e-13
UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella ve... 63 3e-08
UniRef50_O95793 Cluster: Double-stranded RNA-binding protein Sta... 59 3e-07
UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, R... 58 1e-06
UniRef50_A7SHZ6 Cluster: Predicted protein; n=1; Nematostella ve... 50 3e-04
UniRef50_UPI0000E4A4CD Cluster: PREDICTED: similar to Staufen, R... 46 0.002
UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious... 46 0.004
UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19; Eutele... 46 0.004
UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanth... 45 0.007
UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736 p... 44 0.013
UniRef50_O75569 Cluster: Interferon-inducible double stranded RN... 44 0.013
UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p; ... 42 0.039
UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3; C... 42 0.039
UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2; Chlor... 42 0.039
UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus Pelagib... 42 0.068
UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whol... 41 0.090
UniRef50_Q56UE8 Cluster: Putative double strand RNA binding prot... 41 0.090
UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,... 41 0.12
UniRef50_A7THU4 Cluster: Putative uncharacterized protein; n=1; ... 41 0.12
UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3; ... 41 0.12
UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila melanogaster|... 40 0.16
UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding prote... 40 0.21
UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|R... 40 0.21
UniRef50_Q9NII1 Cluster: Double-stranded RNA-specific editase Ad... 40 0.21
UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus Desul... 39 0.36
UniRef50_Q94238 Cluster: Putative uncharacterized protein; n=2; ... 38 0.63
UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-P... 38 0.63
UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio "In... 38 0.83
UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome s... 38 0.83
UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:... 37 1.5
UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio bacte... 37 1.5
UniRef50_UPI000065CF90 Cluster: Homolog of Brachydanio rerio "In... 37 1.9
UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:... 37 1.9
UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorfe... 37 1.9
UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:... 36 2.5
UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n... 36 3.4
UniRef50_Q08FV9 Cluster: DsRNA binding PKR inhibitor; n=7; Poxvi... 36 3.4
UniRef50_Q82F25 Cluster: Putative uncharacterized protein; n=1; ... 36 3.4
UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usita... 36 3.4
UniRef50_Q8IJ86 Cluster: Putative uncharacterized protein; n=3; ... 36 3.4
UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aed... 36 3.4
UniRef50_Q6CW08 Cluster: Similarities with sp|P53244 Saccharomyc... 36 3.4
UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|R... 36 3.4
UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27; Epsilonproteobact... 36 3.4
UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter xyla... 36 4.4
UniRef50_A6EDF1 Cluster: Hemagglutinin-related protein; n=1; Ped... 36 4.4
UniRef50_Q9XTU4 Cluster: Putative uncharacterized protein fbxa-2... 36 4.4
UniRef50_Q54BM0 Cluster: Putative uncharacterized protein; n=1; ... 36 4.4
UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila pseudoobscu... 36 4.4
UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep: Ri... 36 4.4
UniRef50_Q046R8 Cluster: Adhesion exoprotein; n=1; Lactobacillus... 35 5.9
UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1; ... 35 5.9
UniRef50_Q5CQE7 Cluster: Putative uncharacterized protein; n=1; ... 35 5.9
UniRef50_A7T6A8 Cluster: Predicted protein; n=1; Nematostella ve... 35 5.9
UniRef50_Q7SCE7 Cluster: Predicted protein; n=2; Sordariomycetes... 35 5.9
UniRef50_Q6CES6 Cluster: Similar to sp|P17106 Saccharomyces cere... 35 5.9
UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamo... 35 5.9
UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|R... 35 5.9
UniRef50_Q54XS7 Cluster: Putative uncharacterized protein; n=1; ... 35 7.8
UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria (c... 35 7.8
UniRef50_Q6YPW7 Cluster: Ribonuclease 3; n=3; Candidatus Phytopl... 35 7.8
UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea psych... 35 7.8
UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:... 35 7.8
UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep: Ribo... 35 7.8
UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;... 35 7.8
UniRef50_Q9H307 Cluster: Pinin; n=22; Tetrapoda|Rep: Pinin - Hom... 35 7.8
>UniRef50_Q172A2 Cluster: Staufen; n=2; Neoptera|Rep: Staufen -
Aedes aegypti (Yellowfever mosquito)
Length = 1103
Score = 126 bits (305), Expect = 1e-27
Identities = 66/117 (56%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N+KEKTPMCLVNELARYNKI+HQYRLT E+GPAHKK FTVTL+LG+ EEYTAEG SIK+A
Sbjct: 338 NTKEKTPMCLVNELARYNKIQHQYRLTCESGPAHKKRFTVTLKLGD-EEYTAEGPSIKKA 396
Query: 203 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIY 259
Q N G + PTVELNALAMK +P +Y
Sbjct: 397 Q---HSAAHEAIGATKYKHPPAKTNRAKAGGKTNIGNITPTVELNALAMKRGEPTVY 450
Score = 93.1 bits (221), Expect = 2e-17
Identities = 42/70 (60%), Positives = 49/70 (70%)
Query: 555 KDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHEQCXXXX 614
K QLMYL+QLL F V FSDFPK NHGEYL+LV+LSTEPP +CHG GAS SH++
Sbjct: 935 KKQLMYLAQLLKFEVMFSDFPKGNHGEYLTLVTLSTEPPQLCHGSGASLEESHDEAARGA 994
Query: 615 XXXXXXMGLD 624
+GLD
Sbjct: 995 LEILSKIGLD 1004
Score = 83.0 bits (196), Expect = 2e-14
Identities = 69/219 (31%), Positives = 89/219 (40%), Gaps = 18/219 (8%)
Query: 297 VFVTTCTVGEIETEGEGNGKKVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--- 353
VF T C VG I TEGEGNGKK+SK
Sbjct: 648 VFTTLCKVGSIVTEGEGNGKKLSKKRAAEKMLDELRKLPPASPEKNTRMLLKQKRKVPLP 707
Query: 354 XXXXXNLIKEXXXXXXXXXXXXXXDNPISXXXXXXXXXXXXSPHYAVLEERGAARRREFL 413
NLIKE NPIS P Y ++EERG ARRREF+
Sbjct: 708 KKKTRNLIKEKGDEDPTGMV-----NPISRLMQIQQARKEKEPVYTLVEERGVARRREFI 762
Query: 414 VRCDAPPHSATGRGPNKKTAKRRAAHNVLLAM---EMITNGSTGNTATVNGS--ELSTSA 468
+ A SATG GP KK AK+ AA N+L+ + + + N ++GS E+
Sbjct: 763 MEVSASGKSATGIGPTKKLAKKEAAENLLVMLGYGRSVAGAGSPNKENMSGSANEVVVME 822
Query: 469 SSDGSK----SNGTDSKNKVSDIAASETRQPVPGVLLMD 503
K +G + + K A+ RQ VPGVL ++
Sbjct: 823 KPPARKIVFNESGGEQRGKAQQHGAA-GRQIVPGVLQLN 860
Score = 42.3 bits (95), Expect = 0.039
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLG 187
NS K+P+ LV+E+A K+ Q+ + E GP H KVFT ++G
Sbjct: 612 NSDLKSPISLVHEMALKRKLTVQFEVHGEKGPPHMKVFTTLCKVG 656
>UniRef50_Q7PT34 Cluster: ENSANGP00000019093; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000019093 - Anopheles gambiae
str. PEST
Length = 702
Score = 119 bits (286), Expect = 3e-25
Identities = 64/116 (55%), Positives = 73/116 (62%), Gaps = 3/116 (2%)
Query: 145 KEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQX 204
KEKT MCLVNELARYNKI+HQYRLT E+GPAHKK FTV L+LG+ EEYTAEG+SIK+AQ
Sbjct: 1 KEKTTMCLVNELARYNKIQHQYRLTGESGPAHKKHFTVMLKLGD-EEYTAEGASIKKAQH 59
Query: 205 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIYT 260
+S T PTVELNALAMK +P +YT
Sbjct: 60 KAAGDAIAATKYKHPPARTNRRTKTGTKGNVSSFT--PTVELNALAMKRGEPTVYT 113
Score = 77.8 bits (183), Expect = 8e-13
Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 559 MYLSQLLG-FTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHEQCXXXXXXX 617
+YL+ LG F VQFSDFPK NHGEYL+LV LSTEPP +CHG GAS SH++
Sbjct: 632 VYLTFRLGLFQVQFSDFPKGNHGEYLTLVILSTEPPQLCHGSGASLQESHDEAARGALEI 691
Query: 618 XXXMGL 623
+GL
Sbjct: 692 LSKIGL 697
Score = 41.9 bits (94), Expect = 0.051
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 7/111 (6%)
Query: 378 DNPISXXXXXXXXXXXXSPHYAVLE-ERGAA-RRREFLVRCDAPPHSATGRGPNKKTAKR 435
+NPIS P Y + E +R A RRR+F + A ATG G KK AK
Sbjct: 402 ENPISRLMQIQQARKEKQPVYTLQENDRPAVGRRRQFTIEVSAGGRQATGVGMTKKAAKW 461
Query: 436 RAAHNVLLAM-----EMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSK 481
AA +L+ + E G E + A++D S + G S+
Sbjct: 462 NAAEALLIELGFTPSEAKAGAPAGGDGASANKENQSGAANDSSPTGGKRSR 512
Score = 40.3 bits (90), Expect = 0.16
Identities = 18/24 (75%), Positives = 19/24 (79%)
Query: 297 VFVTTCTVGEIETEGEGNGKKVSK 320
VFVT C VG I TEGEG GKK+SK
Sbjct: 303 VFVTQCKVGTIVTEGEGTGKKLSK 326
Score = 35.1 bits (77), Expect = 5.9
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLG 187
N++ K+P+ LV+E+A + + + SE GP H VF ++G
Sbjct: 267 NAELKSPISLVHEIAVQRSLSVVFEVISEKGPPHMTVFVTQCKVG 311
>UniRef50_Q3L1C9 Cluster: Neuron-specific staufen; n=1; Aplysia
californica|Rep: Neuron-specific staufen - Aplysia
californica (California sea hare)
Length = 950
Score = 110 bits (264), Expect = 1e-22
Identities = 58/120 (48%), Positives = 71/120 (59%), Gaps = 2/120 (1%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N+KEKTPMCL+NELAR+NK+ HQY L E GPAHKK F V L+LG+ EEY+A G SIK+A
Sbjct: 339 NTKEKTPMCLINELARFNKMSHQYTLVDEQGPAHKKTFYVKLKLGD-EEYSASGESIKKA 397
Query: 203 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIYTSL 262
Q + G + PTVELNALAMK +PA+Y S+
Sbjct: 398 QHAAAAIALVETKCPHPPPKPARLGCCDLEKSAD-GNITPTVELNALAMKRGEPALYKSI 456
Score = 75.4 bits (177), Expect = 4e-12
Identities = 62/214 (28%), Positives = 80/214 (37%), Gaps = 19/214 (8%)
Query: 298 FVTTCTVGEIETEGEGNGKKVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 357
F+T CTV ++ TEGEGN KK SK
Sbjct: 610 FLTRCTVADMVTEGEGNSKKTSKKKAAELMLEELRKLPPLATPAFPRPKSKIQMNKKKNR 669
Query: 358 XNLIKEXXXXXXXXXXXXXXDNPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCD 417
NLIK NPIS P Y ++ ERG RRREF+V+ +
Sbjct: 670 -NLIKSELQQQKADPNYGVGINPISRLIQIMQAQKKKEPVYTLVTERGLPRRREFIVQVE 728
Query: 418 APPHSATGRGPNKKTAKRRAAHNVLLAM-----------EMITNGSTGNTATVNGSELST 466
+ G GPNKK AKR AA +L + N STG NG + T
Sbjct: 729 VEDKTCPGSGPNKKLAKRAAAEAMLQLLGYTKPSPQPTKSSFKNPSTGEAGQTNGDKKVT 788
Query: 467 SASSDGSKSNGTDSKNKVSDIAASETRQPVPGVL 500
D S +G D +++ +Q VPG+L
Sbjct: 789 FVGGD-SPGDGDDK------VSSGSNQQRVPGLL 815
Score = 35.9 bits (79), Expect = 3.4
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVL 442
+ V+ E G + FL RC G G +KKT+K++AA +L
Sbjct: 596 FEVIRETGPPHMKNFLTRCTVADMVTEGEGNSKKTSKKKAAELML 640
>UniRef50_Q4SMW1 Cluster: Chromosome 6 SCAF14544, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 6 SCAF14544, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 687
Score = 106 bits (254), Expect = 2e-21
Identities = 59/120 (49%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N KEKTPMCLVNELAR+N+I+ QY+L SE GPAH K+FTV L LGE + + AEG+SIK+A
Sbjct: 3 NPKEKTPMCLVNELARFNRIQPQYKLLSERGPAHAKIFTVQLALGE-QVWEAEGTSIKKA 61
Query: 203 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIYTSL 262
Q N G++ PTVELN LAMK +PAIY L
Sbjct: 62 Q-----HSTAARALEESVLPRPAPRSPKVDINSNPGSITPTVELNGLAMKRGEPAIYRPL 116
Score = 37.5 bits (83), Expect = 1.1
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 397 HYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVL 442
++ VL+E G + FL R SA G G +KK +K+RAA ++L
Sbjct: 286 NFEVLKESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAAISIL 331
Score = 35.9 bits (79), Expect = 3.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCD 417
NPIS P Y +L ERG RRREF+++ D
Sbjct: 369 NPISRLAQIQQAKKEKEPEYVLLSERGMPRRREFIMQMD 407
Score = 35.5 bits (78), Expect = 4.4
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 298 FVTTCTVGEIETEGEGNGKKVSK 320
F+T TVGE EGEGN KK+SK
Sbjct: 301 FLTRVTVGEFSAEGEGNSKKLSK 323
>UniRef50_P25159 Cluster: Maternal effect protein staufen; n=4;
Drosophila|Rep: Maternal effect protein staufen -
Drosophila melanogaster (Fruit fly)
Length = 1026
Score = 103 bits (248), Expect = 1e-20
Identities = 59/115 (51%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 145 KEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQX 204
K+KTPMCLVNELARYNKI HQYRLT E GPAH K FTVTL LG+ EEY+A+G IK+AQ
Sbjct: 308 KDKTPMCLVNELARYNKITHQYRLTEERGPAHCKTFTVTLMLGD-EEYSADGFKIKKAQH 366
Query: 205 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIY 259
+ PTVELNALAMKL Q Y
Sbjct: 367 LAASKAIEETMYKHPPPKIRRSEEGGPMRTH----ITPTVELNALAMKLGQRTFY 417
Score = 76.6 bits (180), Expect = 2e-12
Identities = 48/196 (24%), Positives = 74/196 (37%), Gaps = 10/196 (5%)
Query: 429 NKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSDIA 488
NKK AK+R ++ + V E S ++++ G SN + ++ ++ A
Sbjct: 837 NKKPAKKRDQIVIVKSNVESKEEEANKEVAVAAEENSNNSANSGDSSNSSSGDSQATEAA 896
Query: 489 ASETRQPVPGVLLMDYXXXXXXXXXXXXXXKNKRGXXXXXXXXXXXXXXXXXXXXXXXXX 548
+ G N
Sbjct: 897 SESALNTSTG----------SNTSGVSSNSSNVGANTDGNNHAESKNNTESSSNSTSNTQ 946
Query: 549 XXXXXAKDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHE 608
K+QL+YLS+LL F V FSD+PK NH E+L++V+LST PP +CHG G S+ S
Sbjct: 947 SAGVHMKEQLLYLSKLLDFEVNFSDYPKGNHNEFLTIVTLSTHPPQICHGVGKSSEESQN 1006
Query: 609 QCXXXXXXXXXXMGLD 624
+GL+
Sbjct: 1007 DAASNALKILSKLGLN 1022
Score = 52.0 bits (119), Expect = 5e-05
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Query: 378 DNPISXXXXXXXXXXXXSPHYAVLEERG--AARRREFLVRCDAPPHSATGRGPNKKTAKR 435
DNPI+ P + ++ + G ARRREF++ A +A G G +KK AKR
Sbjct: 710 DNPITKLIQLQQTRKEKEPIFELIAKNGNETARRREFVMEVSASGSTARGTGNSKKLAKR 769
Query: 436 RAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSDIAASETRQP 495
AA + +E + T T + E STSA+ + ++ + + P
Sbjct: 770 NAAQALFELLEAVQ--VTPTNETQSSEECSTSATMSAVTAPAVEATAEGKVPMVATPVGP 827
Query: 496 VPGVLLM 502
+PG+L++
Sbjct: 828 MPGILIL 834
Score = 42.7 bits (96), Expect = 0.029
Identities = 18/23 (78%), Positives = 19/23 (82%)
Query: 298 FVTTCTVGEIETEGEGNGKKVSK 320
F+T C VG I TEGEGNGKKVSK
Sbjct: 610 FITACIVGSIVTEGEGNGKKVSK 632
Score = 42.3 bits (95), Expect = 0.039
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 397 HYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMI-----TNG 451
H+ VL E G A + F+ C G G KK +K+RAA +L+ ++ + T
Sbjct: 595 HFKVLREEGPAHMKNFITACIVGSIVTEGEGNGKKVSKKRAAEKMLVELQKLPPLTPTKQ 654
Query: 452 STGNTATVNGSELSTSASSDGSKSNGTD 479
+ V S +A+ +GS +GTD
Sbjct: 655 TPLKRIKVKTPGKSGAAAREGSVVSGTD 682
>UniRef50_Q9NHD2 Cluster: Staufen; n=1; Musca domestica|Rep: Staufen
- Musca domestica (House fly)
Length = 985
Score = 101 bits (242), Expect = 6e-20
Identities = 58/111 (52%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
+S+EKTPMCLVN+LAR+NKI QYRLT E GPAH K FTVTL+LG+ EEY AEG IK A
Sbjct: 284 SSREKTPMCLVNDLARFNKISFQYRLTGENGPAHCKRFTVTLKLGD-EEYMAEGFKIKEA 342
Query: 203 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKL 253
Q N V PTVELNALAMKL
Sbjct: 343 QHMAAKEAILKTKYKHPIPKANRRNDEQGTSKVN---VTPTVELNALAMKL 390
Score = 99.1 bits (236), Expect = 3e-19
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 15/261 (5%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGA---ARRREFLVRCDAPPHSATGRGPNKKTAKR 435
NPI+ P + ++ E G AR+R+F+V + G G +KK+A+R
Sbjct: 724 NPITKLVEWCQHNKEKEPIFKIITEAGGKERARQRQFVVEVCTKDLTVRGVGNSKKSARR 783
Query: 436 RAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGS-----KSNGTDSKNKVSDIAAS 490
AA N+LLA+ + T S + T ++ S ++++ S K+ D KN+ ++
Sbjct: 784 NAAQNMLLALGVDTTTSNSSEKTPQSAQKSDESTNNSSNEKSLKTASADFKNRDEEMERV 843
Query: 491 ETRQPVPGVLLMDYXX-------XXXXXXXXXXXXKNKRGXXXXXXXXXXXXXXXXXXXX 543
+ + + + +
Sbjct: 844 KDTKAINITMKAEEEKKEEKPMVSSNTTTPAAAGSSAAAASTSVNPTVTSPSSVATTTTT 903
Query: 544 XXXXXXXXXXAKDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGAST 603
KD+L+YL++L+GF V FSD+PK NH E+LS+V +ST PP +CHG GA+
Sbjct: 904 TTPKSSSGLYMKDKLLYLAKLMGFEVDFSDYPKGNHNEFLSIVMISTNPPQICHGIGANA 963
Query: 604 AHSHEQCXXXXXXXXXXMGLD 624
S E MGL+
Sbjct: 964 QESQEDAARNALKILSEMGLN 984
Score = 37.1 bits (82), Expect = 1.5
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 298 FVTTCTVGEIETEGEGNGKKVSK 320
F T C VG+I TE EG GKK+SK
Sbjct: 611 FTTACIVGQIVTEAEGTGKKISK 633
>UniRef50_Q9NUL3 Cluster: Double-stranded RNA-binding protein
Staufen homolog 2; n=59; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 2 -
Homo sapiens (Human)
Length = 570
Score = 99.1 bits (236), Expect = 3e-19
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N KEKT MCLVNELAR+N+++ QY+L +E GPAH K+F+V L LGE + + +EGSSIK+A
Sbjct: 3 NPKEKTAMCLVNELARFNRVQPQYKLLNERGPAHSKMFSVQLSLGE-QTWESEGSSIKKA 61
Query: 203 QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIYTSL 262
Q N G++ PTVELN LAMK +PAIY L
Sbjct: 62 Q-----QAVANKALTESTLPKPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPL 116
Score = 57.6 bits (133), Expect = 1e-06
Identities = 29/67 (43%), Positives = 36/67 (53%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPIS P Y +L ERG RRREF+++ ATG GPNKK AK+ AA
Sbjct: 307 NPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAA 366
Query: 439 HNVLLAM 445
+LL +
Sbjct: 367 EAMLLQL 373
Score = 36.3 bits (80), Expect = 2.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMI 448
+ V++E G + F+ R SA G G +KK +K+RAA VL ++ +
Sbjct: 225 FEVIKESGPPHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKL 275
Score = 35.1 bits (77), Expect = 5.9
Identities = 15/23 (65%), Positives = 17/23 (73%)
Query: 298 FVTTCTVGEIETEGEGNGKKVSK 320
FVT +VGE EGEGN KK+SK
Sbjct: 239 FVTRVSVGEFSAEGEGNSKKLSK 261
>UniRef50_UPI00015B63B9 Cluster: PREDICTED: similar to staufen; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to staufen -
Nasonia vitripennis
Length = 587
Score = 84.6 bits (200), Expect = 7e-15
Identities = 39/71 (54%), Positives = 48/71 (67%)
Query: 555 KDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHEQCXXXX 614
KDQL YL+QLL F VQFSDFPK + EYLSLVSLST+PP +CHG G + + S +Q
Sbjct: 477 KDQLKYLAQLLNFEVQFSDFPKGTYKEYLSLVSLSTDPPQVCHGHGPTKSASRDQAALTA 536
Query: 615 XXXXXXMGLDA 625
+GLD+
Sbjct: 537 LRTLSKLGLDS 547
Score = 72.5 bits (170), Expect = 3e-11
Identities = 61/194 (31%), Positives = 76/194 (39%), Gaps = 9/194 (4%)
Query: 295 VDVFVTTCTVGEIETEGEGNGKKVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 352
+ F+T CTVG+ T GEG+ KKVSK
Sbjct: 219 IRTFMTRCTVGDKVTLGEGSSKKVSKKRAAELMLEELKRLPLVAAPIQNRTLRLKRKPPA 278
Query: 353 XXXXXXNLIKEXXXXXXXXXXXXXXDNPISXXXXXXXXXXXXSPHYAVLEERGAARRREF 412
NLIK NPIS P Y ++EE+GA RRREF
Sbjct: 279 TKKKSRNLIKVYQEPRTEADSSEEV-NPISRLVQIQQAKREREPVYNLVEEKGAPRRREF 337
Query: 413 LVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDG 472
++ HSA G GPNKK AKR AA LLA T G + + TS+S G
Sbjct: 338 VMEVSVGQHSAQGTGPNKKLAKRAAA-EALLA----TLGYSKPQPQPAKPSIKTSSSGIG 392
Query: 473 SKSNGTDSKNKVSD 486
NG ++K V +
Sbjct: 393 G-GNGAENKEGVGE 405
>UniRef50_Q94239 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 705
Score = 79.4 bits (187), Expect = 3e-13
Identities = 36/59 (61%), Positives = 45/59 (76%)
Query: 145 KEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
KEK+ MC V E+AR+NK++H Y L E+GPAHKK+FTV L L EAE + G+SIKRAQ
Sbjct: 75 KEKSAMCRVAEIARFNKLRHVYNLQDESGPAHKKLFTVKLVLTEAETFEGSGTSIKRAQ 133
Score = 41.9 bits (94), Expect = 0.051
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NP+S P + ++ E G ++ +EF+++ G+GPNK+ AKR AA
Sbjct: 413 NPVSRLIQVTQAKSKEHPTFELVAEHGVSKYKEFIIQVKYGDDVQEGKGPNKRLAKRAAA 472
Query: 439 HNVL 442
+L
Sbjct: 473 EAML 476
Score = 40.7 bits (91), Expect = 0.12
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 554 AKDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHE 608
A L LS F++Q++ FP+ ++ ++VS+ E P++ HG G ST + E
Sbjct: 633 AHHHLEQLSDFFKFSLQYTSFPQVGIDQHFTIVSIGLEAPLVGHGTGCSTTEADE 687
>UniRef50_A7SHZ5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 423
Score = 62.9 bits (146), Expect = 3e-08
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 146 EKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQXX 205
+KTP+ L+NELA+ N + +Y + ETGPAHKK F V L+LG+ + ++IK A+
Sbjct: 3 QKTPISLMNELAKANNLNPEYNVIEETGPAHKKTFKVQLKLGDIGIWEGMANNIKLAK-- 60
Query: 206 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSGTVMPTVELNALAMKLCQPAIYTSLP 263
+ PTVELN LAMKL + Y LP
Sbjct: 61 -------HKAAEKGLENCGLCMPEKKVVISRPVNLTPTVELNGLAMKLGKTTQYRELP 111
Score = 52.0 bits (119), Expect = 5e-05
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAM 445
+P Y+++EERG ++EF +R H A G GPNKKTAK+ AA +L M
Sbjct: 357 APVYSLVEERGHMMKKEFTLRVKVGSHEALGVGPNKKTAKKNAAEAMLQLM 407
>UniRef50_O95793 Cluster: Double-stranded RNA-binding protein
Staufen homolog 1; n=72; Euteleostomi|Rep:
Double-stranded RNA-binding protein Staufen homolog 1 -
Homo sapiens (Human)
Length = 577
Score = 59.3 bits (137), Expect = 3e-07
Identities = 29/64 (45%), Positives = 35/64 (54%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPIS P Y +L ERG RRREF+++ H+A G G NKK AKR AA
Sbjct: 286 NPISRLAQIQQAKKEKEPEYTLLTERGLPRRREFVMQVKVGNHTAEGTGTNKKVAKRNAA 345
Query: 439 HNVL 442
N+L
Sbjct: 346 ENML 349
Score = 58.8 bits (136), Expect = 4e-07
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 556 DQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHE 608
+QL YLS++ GF V++ DFPK N E++SL++ S++PP++ HG G H+
Sbjct: 491 EQLDYLSRVQGFQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHD 543
>UniRef50_UPI0000D55E1B Cluster: PREDICTED: similar to staufen, RNA
binding protein, homolog 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to staufen, RNA
binding protein, homolog 2 - Tribolium castaneum
Length = 480
Score = 57.6 bits (133), Expect = 1e-06
Identities = 28/58 (48%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 146 EKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
EK + + ELA++N+I+ Y L SE GP H K+F V+L LG+ E Y GSS+K+AQ
Sbjct: 15 EKNIVATIYELAQFNEIECSYTLISEEGPPHAKIFKVSLHLGD-ELYEGSGSSLKKAQ 71
Score = 41.9 bits (94), Expect = 0.051
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 555 KDQLMYLSQLLGFTVQFSDFPKRNHGEYLSLVSLSTEPPVMCHGGGASTAHSHE 608
K +L+ + L V+F+D K+++ +Y +LVSL +PP +C G A A SHE
Sbjct: 379 KTKLLEIGNKLNINVEFTDLIKQDN-QYYTLVSLGLKPPHVCLGKAAVQAKSHE 431
Score = 34.7 bits (76), Expect = 7.8
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 147 KTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEG 196
K+P+ V+E A+ N + ++ + SE+G H++ F +LG +Y EG
Sbjct: 230 KSPITRVHEAAQLNNLALEFNVISESGKPHQRNFVTECKLG---DYVTEG 276
>UniRef50_A7SHZ6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 292
Score = 49.6 bits (113), Expect = 3e-04
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 556 DQLMYLSQLLGFTVQFSDFPKRNHG--EYLSLVSLSTEPPVMCHGGGASTAHSHEQ 609
+ LM L++ G V+F+D+PK N G E+LS+ ++S PP+ C+G G + S E+
Sbjct: 108 ESLMSLAEKHGLVVKFTDYPKDNKGTPEFLSVCNVSCVPPITCYGSGKTIEESREE 163
>UniRef50_UPI0000E4A4CD Cluster: PREDICTED: similar to Staufen, RNA
binding protein, homolog 2 (Drosophila), partial; n=4;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
Staufen, RNA binding protein, homolog 2 (Drosophila),
partial - Strongylocentrotus purpuratus
Length = 486
Score = 46.4 bits (105), Expect = 0.002
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEER------GA--ARRREFLVRCDAPPHSATGRGPNK 430
+P+S P +AV EER GA RRREF ++ A +A+G+G K
Sbjct: 385 HPVSRLVQILQAKNEREPEFAVTEERPLMERAGAHMIRRREFTMQVSAASKTASGKGKTK 444
Query: 431 KTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSK 474
K AK++AA N+L + N V + S SA GSK
Sbjct: 445 KDAKKQAAENMLKLLGYAPTPEESN--GVGAGQPSKSALKTGSK 486
Score = 37.1 bits (82), Expect = 1.5
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVL 442
+ VL+ERG + F ++C + GP+KK AKR+AA +L
Sbjct: 287 FKVLDERGQPHLKIFKLQCTVGEFNTESEGPSKKDAKRKAAELML 331
>UniRef50_UPI0000DB756B Cluster: PREDICTED: similar to loquacious
CG6866-PA, isoform A; n=1; Apis mellifera|Rep:
PREDICTED: similar to loquacious CG6866-PA, isoform A -
Apis mellifera
Length = 338
Score = 45.6 bits (103), Expect = 0.004
Identities = 22/71 (30%), Positives = 31/71 (43%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPI P Y + E G R+F + C + G+G +KK AKR AA
Sbjct: 176 NPIGALQEMCMSRHWPPPKYTIENEEGLPHERQFTIVCSVLKYREVGQGKSKKVAKRHAA 235
Query: 439 HNVLLAMEMIT 449
H + A+ +T
Sbjct: 236 HKMWQALHYMT 246
>UniRef50_Q15633 Cluster: TAR RNA-binding protein 2; n=19;
Euteleostomi|Rep: TAR RNA-binding protein 2 - Homo
sapiens (Human)
Length = 366
Score = 45.6 bits (103), Expect = 0.004
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NP+ P Y V +E G A R+EF + C G G +KK AKR AA
Sbjct: 159 NPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFIEIGSGTSKKLAKRNAA 218
Query: 439 HNVLLAMEMI-TNGSTGNTATVNGSELSTSAS--SDGSKSNG 477
+LL + + + GN + S DG ++ G
Sbjct: 219 AKMLLRVHTVPLDARDGNEVEPDDDHFSIGVGFRLDGLRNRG 260
Score = 41.5 bits (93), Expect = 0.068
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTG 454
+P Y +L+ G A + F R S TG+GP+KK AK +AA +A++ + GS
Sbjct: 45 TPVYDLLKAEGQAHQPNFTFRVTVGDTSCTGQGPSKKAAKHKAAE---VALKHLKGGSML 101
Query: 455 NTATVNGSELSTSASS 470
A + S S SS
Sbjct: 102 EPALEDSSSFSPLDSS 117
>UniRef50_Q1D5X9 Cluster: Ribonuclease III; n=1; Myxococcus xanthus
DK 1622|Rep: Ribonuclease III - Myxococcus xanthus
(strain DK 1622)
Length = 260
Score = 44.8 bits (101), Expect = 0.007
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 152 LVNELARYN-KIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
L+ E+A K++ +YR+ SE+GP H KVF V L LGE A G S K A+
Sbjct: 176 LLQEMAHERLKLQPRYRVVSESGPEHSKVFEVELMLGETAFARATGRSKKEAE 228
>UniRef50_UPI0000588C0A Cluster: PREDICTED: similar to MGC53736
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC53736 protein -
Strongylocentrotus purpuratus
Length = 306
Score = 44.0 bits (99), Expect = 0.013
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEM 447
+P Y + + GA+ + +F +RC A G+GP+KK AK+ AA +VL +++
Sbjct: 21 TPVYDTIGQEGASHQPKFTIRCTAGDVVGNGQGPSKKVAKQSAAEDVLQQLDI 73
Score = 36.7 bits (81), Expect = 1.9
Identities = 19/65 (29%), Positives = 26/65 (40%)
Query: 378 DNPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRA 437
DNP+ P Y LEE G R F++ + G +K+ AKR A
Sbjct: 90 DNPVGELQELVTCMGWRKPEYEALEESGPPHNRRFVISVSVDKYKEQGVDQSKRLAKRAA 149
Query: 438 AHNVL 442
A +L
Sbjct: 150 ASAML 154
>UniRef50_O75569 Cluster: Interferon-inducible double stranded
RNA-dependent protein kinase activator A; n=23;
Euteleostomi|Rep: Interferon-inducible double stranded
RNA-dependent protein kinase activator A - Homo sapiens
(Human)
Length = 313
Score = 44.0 bits (99), Expect = 0.013
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPI P Y + +E G A +RE+ C TG+G +KK AKR AA
Sbjct: 126 NPIGSLQELAIHHGWRLPEYTLSQEGGPAHKREYTTICRLESFMETGKGASKKQAKRNAA 185
Query: 439 HNVLLAMEMITNGSTGNTATVNGSELSTS----ASSDGSKSN 476
L I+ + + V G L + +S G K N
Sbjct: 186 EKFLAKFSNISPENHISLTNVVGHSLGCTWHSLRNSPGEKIN 227
Score = 35.9 bits (79), Expect = 3.4
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 556 DQLMYLSQLL---GFTVQFSDFPKRN-HGEYLSLVSLSTEPPVMCHGGGASTAHS 606
D + LS++ GF + + D + + +G+Y L LST P +CHG G S ++
Sbjct: 240 DYIQLLSEIAKEQGFNITYLDIDELSANGQYQCLAELSTSPITVCHGSGISCGNA 294
>UniRef50_UPI00015B5C32 Cluster: PREDICTED: similar to RE14437p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
RE14437p - Nasonia vitripennis
Length = 394
Score = 42.3 bits (95), Expect = 0.039
Identities = 21/76 (27%), Positives = 35/76 (46%)
Query: 378 DNPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRA 437
+NPI P Y++ E G R+F + C + G+G +KK AKR+A
Sbjct: 183 NNPIGSLQEMCMSRHWPPPKYSMEGEEGLPHERQFTIVCSILKYRQVGQGKSKKLAKRQA 242
Query: 438 AHNVLLAMEMITNGST 453
AH + +++ + T
Sbjct: 243 AHKMWQSLQDTNSNRT 258
>UniRef50_Q7SXR1 Cluster: TAR (HIV) RNA binding protein 2; n=3;
Clupeocephala|Rep: TAR (HIV) RNA binding protein 2 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 346
Score = 42.3 bits (95), Expect = 0.039
Identities = 22/64 (34%), Positives = 28/64 (43%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NP+ P Y V +E G A R+EF + C G G +KK AKR AA
Sbjct: 139 NPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVEIGSGTSKKLAKRNAA 198
Query: 439 HNVL 442
+L
Sbjct: 199 AKML 202
Score = 39.9 bits (89), Expect = 0.21
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTG 454
+P Y +L+ G A + F R + TG GP+KK AK +AA A++M+ G G
Sbjct: 45 TPVYDLLKAEGQAHQPNFTFRVSVGDINCTGHGPSKKAAKHKAAE---AALKMLKGGMLG 101
Query: 455 NTATVNGSE 463
NG E
Sbjct: 102 GIGG-NGME 109
>UniRef50_Q3E502 Cluster: Ribonuclease III, bacterial; n=2;
Chloroflexus|Rep: Ribonuclease III, bacterial -
Chloroflexus aurantiacus J-10-fl
Length = 244
Score = 42.3 bits (95), Expect = 0.039
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 396 PHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAME 446
P Y++ EERG +RE+++ TG G +KK AKR AA L A +
Sbjct: 178 PDYSIEEERGPEHQREYVMAVTVAGRKFTGSGSSKKEAKRAAARKALAAWD 228
>UniRef50_Q4FLS9 Cluster: Ribonuclease 3; n=2; Candidatus
Pelagibacter ubique|Rep: Ribonuclease 3 - Pelagibacter
ubique
Length = 222
Score = 41.5 bits (93), Expect = 0.068
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 161 KIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
K+ Y+L S TGP HK +F V ++L + +TAEG+S K A+
Sbjct: 166 KVLPIYKLISNTGPRHKPLFKVAVKLKNTKFFTAEGTSKKDAE 208
>UniRef50_Q4T1R2 Cluster: Chromosome undetermined SCAF10493, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10493,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 673
Score = 41.1 bits (92), Expect = 0.090
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 153 VNELARYNKIKH--QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
+N L R N+I+ QYRL S++GP H VFT+++ + + Y A GSS K A+
Sbjct: 345 MNALMRLNQIRPGLQYRLLSQSGPVHAPVFTMSVDV-DGTVYEASGSSKKTAK 396
Score = 34.7 bits (76), Expect = 7.8
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNG 451
Y ++ E G + + F++ + G GPNKK AK AA L A+E + +G
Sbjct: 480 YDLISESGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA---LAALEKLFSG 530
>UniRef50_Q56UE8 Cluster: Putative double strand RNA binding
protein; n=1; Lymnaea stagnalis|Rep: Putative double
strand RNA binding protein - Lymnaea stagnalis (Great
pond snail)
Length = 141
Score = 41.1 bits (92), Expect = 0.090
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHS-ATGRGPNKKTAKRRAAHNVLLAMEMITNG 451
+P Y ++ GA F++R ++ ATG+G +KK AK AA N L + +TNG
Sbjct: 23 TPQYDLIANEGAVHEPTFIMRVTVGDNAVATGKGSSKKKAKHAAAQNALNILLGVTNG 80
Score = 38.3 bits (85), Expect = 0.63
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 147 KTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
KTP+ + E A + I QY L + G H+ F + + +G+ T +GSS K+A+
Sbjct: 7 KTPISYLQEYATKHAITPQYDLIANEGAVHEPTFIMRVTVGDNAVATGKGSSKKKAK 63
>UniRef50_UPI0000D571A6 Cluster: PREDICTED: similar to CG6866-PB,
isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG6866-PB, isoform B - Tribolium castaneum
Length = 384
Score = 40.7 bits (91), Expect = 0.12
Identities = 21/68 (30%), Positives = 28/68 (41%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPI P Y + E G R+F + C G G +KK AKR AA
Sbjct: 167 NPIGWLQEMCMSRRWPPPSYEMEHEEGLPHERQFTIACQVLKFKEVGTGKSKKLAKRMAA 226
Query: 439 HNVLLAME 446
H + A++
Sbjct: 227 HKMWQALQ 234
>UniRef50_A7THU4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 1127
Score = 40.7 bits (91), Expect = 0.12
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 425 GRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKV 484
G GPN + N++ ++ T + GN + N S STS S+ S N T+S V
Sbjct: 934 GNGPNTSSNSGTINGNIV-SVGTNTASNNGNGNSGNNSLKSTSNSTVTSVENSTNSTLSV 992
Query: 485 SDIAASETRQPVPGVLLMD 503
S +S QP P +L+MD
Sbjct: 993 STSTSSNIMQPPPKLLMMD 1011
>UniRef50_Q12906 Cluster: Interleukin enhancer-binding factor 3;
n=75; Euteleostomi|Rep: Interleukin enhancer-binding
factor 3 - Homo sapiens (Human)
Length = 894
Score = 40.7 bits (91), Expect = 0.12
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 149 PMCLVNELARYNKIKH--QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
P +N L R N++K QY+L S+TGP H +FT+++ + + + A G S K A+
Sbjct: 399 PPQAMNALMRLNQLKPGLQYKLVSQTGPVHAPIFTMSVEV-DGNSFEASGPSKKTAK 454
>UniRef50_Q8IHA8 Cluster: AT18855p; n=3; Drosophila
melanogaster|Rep: AT18855p - Drosophila melanogaster
(Fruit fly)
Length = 886
Score = 40.3 bits (90), Expect = 0.16
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 144 SKEKTPMCLVNELARYNK-IKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKR 201
+++K P+C++NEL NK + QY+L + GPAH + F ++ + GS+ K+
Sbjct: 808 TQDKHPVCVLNELTSKNKWMPPQYKLRQDIGPAHNRSFLFSVEINGQTFTPDRGSNNKK 866
>UniRef50_Q96SI9 Cluster: Spermatid perinuclear RNA-binding protein;
n=51; Euteleostomi|Rep: Spermatid perinuclear
RNA-binding protein - Homo sapiens (Human)
Length = 672
Score = 39.9 bits (89), Expect = 0.21
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 152 LVNELARYNKIKH--QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
L+N L R N+I+ QY+L S++GP H VFT+++ + + Y A G S K A+
Sbjct: 388 LMNALMRLNQIRPGLQYKLLSQSGPVHAPVFTMSVDV-DGTTYEASGPSKKTAK 440
Score = 35.9 bits (79), Expect = 3.4
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 6/95 (6%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTA 457
Y +L + G F + D + GP+KKTAK A VL AM TG A
Sbjct: 404 YKLLSQSGPVHAPVFTMSVDVDGTTYEASGPSKKTAKLHVAVKVLQAM----GYPTGFDA 459
Query: 458 TVNGSELSTSASSDGSKSNGTDSKNKVSDIAASET 492
+ +S+ SD N T S N ++ S T
Sbjct: 460 DIEC--MSSDEKSDNESKNETVSSNSSNNTGNSTT 492
Score = 35.1 bits (77), Expect = 5.9
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNG 451
Y ++ E G + + F++ + G GPNKK AK AA L A+E + +G
Sbjct: 527 YELISETGGSHDKRFVMEVEVDGQKFRGAGPNKKVAKASAA---LAALEKLFSG 577
>UniRef50_Q9Z5U2 Cluster: Ribonuclease 3; n=7; Sphingomonadales|Rep:
Ribonuclease 3 - Zymomonas mobilis
Length = 223
Score = 39.9 bits (89), Expect = 0.21
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 144 SKEKTPMCLVNE-LARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
S K P + E A +N+ Y + S TGP H FT+ + + E +AEGSS + A
Sbjct: 150 SAPKHPKSALQEWAAAHNRRPPVYEIVSRTGPQHNPCFTIQVSIAGVGEASAEGSSKQEA 209
Query: 203 Q 203
Q
Sbjct: 210 Q 210
>UniRef50_Q9NII1 Cluster: Double-stranded RNA-specific editase Adar;
n=12; Diptera|Rep: Double-stranded RNA-specific editase
Adar - Drosophila melanogaster (Fruit fly)
Length = 676
Score = 39.9 bits (89), Expect = 0.21
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 145 KEKTPMCLVNELARYNKIKHQ--YRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
KE+ P N +A N+++H Y+L S+TGP H +FT+++ + + ++Y +G S K A
Sbjct: 56 KERIPQPK-NTVAMLNELRHGLIYKLESQTGPVHAPLFTISVEV-DGQKYLGQGRSKKVA 113
Query: 203 Q 203
+
Sbjct: 114 R 114
>UniRef50_A1I8J4 Cluster: Ribonuclease III; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Ribonuclease III -
Candidatus Desulfococcus oleovorans Hxd3
Length = 231
Score = 39.1 bits (87), Expect = 0.36
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVL 442
+P Y +++E G + F R A A G G NKKTA++ AAH L
Sbjct: 175 APTYEIIDETGPDHDKTFHCRVSAGDIQAEGSGKNKKTAQQDAAHKAL 222
>UniRef50_Q94238 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 284
Score = 38.3 bits (85), Expect = 0.63
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NP++ P + ++E+ + REF+++ + GRGP+K +KR AA
Sbjct: 143 NPVAQLNEYAQKFYKKYPTFEFVKEQAVGKHREFVIQATFENKTLEGRGPSKIISKRAAA 202
Query: 439 HNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSK 474
+L ++ I S T + LS + K
Sbjct: 203 EAILESIGFI-KPSLSKPDTSEAAHLSPEQTDTNEK 237
>UniRef50_Q29P93 Cluster: GA19915-PA; n=2; Diptera|Rep: GA19915-PA -
Drosophila pseudoobscura (Fruit fly)
Length = 395
Score = 38.3 bits (85), Expect = 0.63
Identities = 21/63 (33%), Positives = 26/63 (41%)
Query: 379 NPISXXXXXXXXXXXXSPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
NPI P YA E G R F + C + G+G +KK AKR AA
Sbjct: 227 NPIGLLQELCMQRRWPPPTYATETEMGLPHERLFTIACTILQYREIGKGKSKKIAKRSAA 286
Query: 439 HNV 441
H +
Sbjct: 287 HKM 289
>UniRef50_UPI000065CF8F Cluster: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog. -
Takifugu rubripes
Length = 275
Score = 37.9 bits (84), Expect = 0.83
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 153 VNELARYNKIKH--QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
+N L R N+I QYRL S++GP H VFT+++ + + Y A G+S + A+
Sbjct: 152 MNALMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDI-QGTTYQATGNSKRTAK 203
>UniRef50_Q4RPN1 Cluster: Chromosome 12 SCAF15007, whole genome
shotgun sequence; n=5; root|Rep: Chromosome 12
SCAF15007, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 850
Score = 37.9 bits (84), Expect = 0.83
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 153 VNELARYNKIKH--QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
+N L R N+I QYRL S++GP H VFT+++ + + Y A G+S + A+
Sbjct: 511 MNALMRLNQIHPGLQYRLLSQSGPVHAPVFTMSVDV-QGNTYQATGNSKRTAK 562
Score = 35.9 bits (79), Expect = 3.4
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTGNT 456
Y ++ E G++ + F++ + G GPNKK AK AA L A+ + +GS T
Sbjct: 678 YELISESGSSYDKRFIIEVEVDKQVFRGTGPNKKVAKASAA---LAALNSLFSGSKSAT 733
>UniRef50_A5HMG3 Cluster: Adenosine deaminase; n=2; Apocrita|Rep:
Adenosine deaminase - Apis mellifera (Honeybee)
Length = 620
Score = 37.1 bits (82), Expect = 1.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N + K +C +NEL K Y++ +TGP H +FT+ +++ + + Y +G + K A
Sbjct: 31 NPQPKNAVCALNEL----KSGAVYKVVDQTGPTHAPIFTIAVQI-DGQTYEGKGRTKKMA 85
Query: 203 Q 203
+
Sbjct: 86 K 86
>UniRef50_Q6MLR5 Cluster: Ribonuclease 3; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease 3 - Bdellovibrio
bacteriovorus
Length = 234
Score = 37.1 bits (82), Expect = 1.5
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHS-ATGRGPNKKTAKRRAAHNVL 442
+P Y VL E G REFLV A GRG +KK A++ AA N L
Sbjct: 178 TPRYEVLAEEGPPHDREFLVCVKVKEDVWAQGRGRSKKNAEQMAAKNAL 226
>UniRef50_UPI000065CF90 Cluster: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog.; n=1;
Takifugu rubripes|Rep: Homolog of Brachydanio rerio
"Interleukin enhancer-binding factor 3 homolog. -
Takifugu rubripes
Length = 258
Score = 36.7 bits (81), Expect = 1.9
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTA 457
Y ++ E G++ + F++ + G GPNKK AK AA L A+ + +GS TA
Sbjct: 28 YELISESGSSYDKRFIIEVEVDKQVFRGMGPNKKVAKASAA---LAALNSLFSGS--KTA 82
Query: 458 TV 459
T+
Sbjct: 83 TI 84
>UniRef50_A5V230 Cluster: Ribonuclease III; n=2; Roseiflexus|Rep:
Ribonuclease III - Roseiflexus sp. RS-1
Length = 237
Score = 36.7 bits (81), Expect = 1.9
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHS-ATGRGPNKKTAKRRAAHNVLLAMEMITNG 451
+P Y ++ G R EF V A TG+GP+K+ A++ AA L A+E T+G
Sbjct: 179 TPRYHEIDRSGPEHRPEFTVEVRAGEERLGTGKGPSKQAAEQAAARAALDALEGGTDG 236
>UniRef50_O51648 Cluster: Ribonuclease 3; n=3; Borrelia burgdorferi
group|Rep: Ribonuclease 3 - Borrelia burgdorferi (Lyme
disease spirochete)
Length = 246
Score = 36.7 bits (81), Expect = 1.9
Identities = 19/43 (44%), Positives = 23/43 (53%)
Query: 161 KIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
KI Y+L E GP H KVF V L +GE +G S K A+
Sbjct: 188 KISPSYKLDKEIGPDHDKVFCVELYVGENFISNGKGKSKKEAE 230
>UniRef50_Q9VJY9 Cluster: CG6866-PB, isoform B; n=8; Diptera|Rep:
CG6866-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 465
Score = 36.3 bits (80), Expect = 2.5
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 396 PHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAME 446
P Y E G R F + C + G+G +KK AKR AAH + + ++
Sbjct: 267 PSYETETEVGLPHERLFTIACSILNYREMGKGKSKKIAKRLAAHRMWMRLQ 317
>UniRef50_UPI00015BD56E Cluster: UPI00015BD56E related cluster; n=1;
unknown|Rep: UPI00015BD56E UniRef100 entry - unknown
Length = 232
Score = 35.9 bits (79), Expect = 3.4
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 396 PHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVL 442
P Y V+ G R+ F V C TG+G +KK A++ AA N+L
Sbjct: 175 PIYNVISVEGPEHRKTFTVECLFKDLRTTGKGNSKKYAEQEAAKNML 221
>UniRef50_Q08FV9 Cluster: DsRNA binding PKR inhibitor; n=7;
Poxviridae|Rep: DsRNA binding PKR inhibitor - Deerpox
virus W-848-83
Length = 199
Score = 35.9 bits (79), Expect = 3.4
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 145 KEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
K+K P ++NE +Y + S +GP HK +FT TL + + +A GS+ K A+
Sbjct: 123 KDKNPCSILNEYCQYTSRDWFIDIIS-SGPIHKPLFTATLCISGVKFRSAIGSTKKEAK 180
>UniRef50_Q82F25 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 256
Score = 35.9 bits (79), Expect = 3.4
Identities = 18/35 (51%), Positives = 21/35 (60%)
Query: 451 GSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVS 485
GSTGN T NG S SA SD SKS+ + S + S
Sbjct: 73 GSTGNKGTGNGGSSSGSADSDDSKSSSSSSSSSSS 107
>UniRef50_Q027L3 Cluster: Ribonuclease III; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease III - Solibacter usitatus
(strain Ellin6076)
Length = 271
Score = 35.9 bits (79), Expect = 3.4
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 153 VNELARYNKIKH-QYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
+ ELA+ ++ +Y + E GP H K FTV +R+G+ AEG + K A
Sbjct: 177 LQELAQTRRLPQPRYSVVRERGPEHSKTFTVEVRVGKEWTAQAEGRTKKIA 227
>UniRef50_Q8IJ86 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1082
Score = 35.9 bits (79), Expect = 3.4
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 427 GPNKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSD 486
G T K +NVL NG+ N N S+ +SSDGS S+G+ S SD
Sbjct: 292 GSFSSTMKNMLQNNVLQGKAYCNNGNMDNNTKSNSSD---GSSSDGSSSDGSSSDGNSSD 348
Query: 487 IAASET 492
++S +
Sbjct: 349 GSSSSS 354
>UniRef50_Q16IC6 Cluster: RNA binding protein, putative; n=1; Aedes
aegypti|Rep: RNA binding protein, putative - Aedes
aegypti (Yellowfever mosquito)
Length = 289
Score = 35.9 bits (79), Expect = 3.4
Identities = 18/44 (40%), Positives = 22/44 (50%)
Query: 395 SPHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAA 438
+P Y +L GAA + F R P A G G +KK AK AA
Sbjct: 76 TPQYDLLPREGAAHEQTFSYRVSYPDGDAIGTGQSKKEAKHAAA 119
>UniRef50_Q6CW08 Cluster: Similarities with sp|P53244 Saccharomyces
cerevisiae YGR068c; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|P53244 Saccharomyces cerevisiae
YGR068c - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 704
Score = 35.9 bits (79), Expect = 3.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 422 SATGRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSD-GSKSNGTDS 480
+ +G N + R ++ N L A+ G GNTA+ NG+ +SA+ G SN + +
Sbjct: 605 NTSGDAGNLQRQSRNSSSNRLAALAAAAAGVAGNTASGNGTNSGSSAAGALGVSSNASSN 664
Query: 481 KNKVSDIAASETRQP 495
++D+ + R P
Sbjct: 665 AASMTDLLSHLQRLP 679
>UniRef50_Q608M7 Cluster: Ribonuclease 3; n=121; Proteobacteria|Rep:
Ribonuclease 3 - Methylococcus capsulatus
Length = 230
Score = 35.9 bits (79), Expect = 3.4
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 396 PHYAVLEERGAARRREFLVRCDAP--PHSATGRGPNKKTAKRRAAHNVL 442
P Y ++++ G + F VRC+ P G G ++K A+++AA N+L
Sbjct: 171 PVYTLIDQSGLPHDQHFRVRCEVPLAVEPCVGEGSSRKKAEQQAAENML 219
>UniRef50_Q7VIA9 Cluster: Ribonuclease 3; n=27;
Epsilonproteobacteria|Rep: Ribonuclease 3 - Helicobacter
hepaticus
Length = 240
Score = 35.9 bits (79), Expect = 3.4
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 166 YRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
Y L SE+GP HKK F + L + E A G+S K AQ
Sbjct: 179 YTLISESGPDHKKSFEIALSVQGKEYARASGNSKKEAQ 216
>UniRef50_Q1AW81 Cluster: Ribonuclease III; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Ribonuclease III -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 233
Score = 35.5 bits (78), Expect = 4.4
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 152 LVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
L+ E + ++ YR+ S+ GP H+ VF + + E T GSSIK+++
Sbjct: 155 LLQETLQAEGLRPTYRVISKQGPPHRPVFISGVSVDGEEVATGRGSSIKQSE 206
>UniRef50_A6EDF1 Cluster: Hemagglutinin-related protein; n=1;
Pedobacter sp. BAL39|Rep: Hemagglutinin-related protein -
Pedobacter sp. BAL39
Length = 7799
Score = 35.5 bits (78), Expect = 4.4
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 429 NKKTA--KRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSD 486
NKK A + V +A ++ NG TG T G+ L T A++D K G + V D
Sbjct: 2011 NKKGAGVSDQIGGTVTIANSIVENGHTGGTNISIGNPLFTDAATDNLKIKGGSAAIDVGD 2070
Query: 487 IAASET 492
AAS T
Sbjct: 2071 NAASGT 2076
>UniRef50_Q9XTU4 Cluster: Putative uncharacterized protein fbxa-218;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein fbxa-218 - Caenorhabditis
elegans
Length = 524
Score = 35.5 bits (78), Expect = 4.4
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 440 NVLLAMEMITNGSTGNTATVNGSELSTSASSDG-SKSNGTDSKNKVSDIAASETR 493
N+ + +NGS ++ + NGS S+ SS+G S S+G+ S N S+I++S R
Sbjct: 96 NISSSSRQPSNGSFRSSGSSNGSSSSSRRSSNGSSSSSGSTSDNSSSNISSSSRR 150
>UniRef50_Q54BM0 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 527
Score = 35.5 bits (78), Expect = 4.4
Identities = 20/63 (31%), Positives = 26/63 (41%)
Query: 459 VNGSELSTSASSDGSKSNGTDSKNKVSDIAASETRQPVPGVLLMDYXXXXXXXXXXXXXX 518
V S+ S S+SSD S S D K K +I ET++P+ V D
Sbjct: 110 VESSDSSDSSSSDSSSSESEDEKKKKKEIKKVETKKPIKKVESSDSSDSDSSDSSSEDEK 169
Query: 519 KNK 521
K K
Sbjct: 170 KKK 172
>UniRef50_Q295I7 Cluster: GA20947-PA; n=1; Drosophila
pseudoobscura|Rep: GA20947-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 851
Score = 35.5 bits (78), Expect = 4.4
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 146 EKTPMCLVNELARYNK-IKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAE 195
+K P+C++NEL N+ QY L E+GP+H + F ++ + + YT +
Sbjct: 775 DKHPVCVLNELTSKNRWTPPQYILQQESGPSHIRSFLFSVEI-NGQSYTPD 824
>UniRef50_Q8EXX3 Cluster: Ribonuclease 3; n=4; Leptospira|Rep:
Ribonuclease 3 - Leptospira interrogans
Length = 247
Score = 35.5 bits (78), Expect = 4.4
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 158 RYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
++ KI YR SE+GP H K F V +R+ + E + G S K A+
Sbjct: 187 KHFKILPIYRTKSESGPDHAKTFQVVVRIRDQWEASGSGVSKKSAE 232
>UniRef50_Q046R8 Cluster: Adhesion exoprotein; n=1; Lactobacillus
gasseri ATCC 33323|Rep: Adhesion exoprotein -
Lactobacillus gasseri (strain ATCC 33323 / DSM 20243)
Length = 2223
Score = 35.1 bits (77), Expect = 5.9
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 449 TNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSDIAASETRQPVP 497
T+ + +T T + S +T+ SSD + DSK + S +A +E P+P
Sbjct: 51 TDANAADTTTTSVSSNTTNNSSDNNTDKKDDSKVETSSLATAEKHAPIP 99
>UniRef50_A7B5M4 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus gnavus ATCC 29149|Rep: Putative
uncharacterized protein - Ruminococcus gnavus ATCC 29149
Length = 252
Score = 35.1 bits (77), Expect = 5.9
Identities = 16/38 (42%), Positives = 21/38 (55%)
Query: 166 YRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
Y L E GP H K FTV +++GE T G + K A+
Sbjct: 200 YHLIKEEGPDHNKSFTVEVKIGETVYGTGSGRTKKAAE 237
>UniRef50_Q5CQE7 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 153
Score = 35.1 bits (77), Expect = 5.9
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 425 GRGPNKKTAKRRAAHNVL-LAMEMITNGSTGNTATVNGSELSTS--ASSDGSKSNGTDSK 481
GRG K+ KRR + A +GS+G++++ + S S+S +SS+GS SNG+ S
Sbjct: 21 GRGRMKRRMKRRKMRRRMGRARGKYDSGSSGSSSSGSSSNGSSSNGSSSNGSSSNGSSSN 80
Query: 482 NKVSDIAAS 490
S+ ++S
Sbjct: 81 GSSSNGSSS 89
Score = 34.7 bits (76), Expect = 7.8
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 449 TNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKVSDIAAS 490
+NGS+ N ++ NGS S +SS+GS SNG+ S S ++S
Sbjct: 59 SNGSSSNGSSSNGSS-SNGSSSNGSSSNGSSSSGSSSSGSSS 99
>UniRef50_A7T6A8 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 171
Score = 35.1 bits (77), Expect = 5.9
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 143 NSKEKTPMCLVNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRA 202
N+ KTP+ +NE K ++RL S+ GP H F V + + + Y +GSS +RA
Sbjct: 53 NATFKTPLMQLNEY----KPGLEFRLVSQEGPPHDTTFVVAVTV-NGQTYEGKGSSKQRA 107
Query: 203 Q 203
+
Sbjct: 108 K 108
>UniRef50_Q7SCE7 Cluster: Predicted protein; n=2;
Sordariomycetes|Rep: Predicted protein - Neurospora
crassa
Length = 591
Score = 35.1 bits (77), Expect = 5.9
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 447 MITNGSTGNTATVNGSELS--TSASSDGSKSNGTDSKNKVSD 486
++ NG+ GN ++VN S S +S+SS SN TD++N SD
Sbjct: 9 LLPNGTAGNNSSVNDSANSRQSSSSSSSLSSNDTDTENTPSD 50
>UniRef50_Q6CES6 Cluster: Similar to sp|P17106 Saccharomyces
cerevisiae YJR060w CBF1 kinetochore protein; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P17106
Saccharomyces cerevisiae YJR060w CBF1 kinetochore
protein - Yarrowia lipolytica (Candida lipolytica)
Length = 425
Score = 35.1 bits (77), Expect = 5.9
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 3 GHPPQHMPGHQAMPAHHQMPPHQLHRENR 31
G PPQH HQA P HH PHQ H +++
Sbjct: 302 GPPPQHHHQHQAPPMHHM--PHQQHPQHQ 328
>UniRef50_Q5UQT7 Cluster: Probable ribonuclease 3; n=1; Acanthamoeba
polyphaga mimivirus|Rep: Probable ribonuclease 3 -
Mimivirus
Length = 538
Score = 35.1 bits (77), Expect = 5.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 152 LVNELARYNKIKHQ-YRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
L+ +L NK H Y++ E GP H K+FT+ L LG + SS K+A+
Sbjct: 472 LILQLYNKNKWGHPVYKILKEEGPDHCKIFTMGLYLGNKLMGIGKASSKKKAE 524
>UniRef50_O67082 Cluster: Ribonuclease 3; n=1; Aquifex aeolicus|Rep:
Ribonuclease 3 - Aquifex aeolicus
Length = 221
Score = 35.1 bits (77), Expect = 5.9
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 396 PHYAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAME 446
P Y ++ G +++F+V + G G +KK A++RAA ++ +E
Sbjct: 168 PEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLE 218
>UniRef50_Q54XS7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 310
Score = 34.7 bits (76), Expect = 7.8
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 452 STGNTATVNGSELSTSASSDGSKSNGTDSKNKVSDIAASETRQPVPGVLLMD 503
+T T T N + S SASS + SN TDSK+ +DI + P + D
Sbjct: 198 TTTTTTTSNSNTNSNSASSLTATSNRTDSKSSKTDITKRNVQNTTPSSSIQD 249
>UniRef50_Q82JT9 Cluster: Ribonuclease 3; n=37; Actinobacteria
(class)|Rep: Ribonuclease 3 - Streptomyces avermitilis
Length = 276
Score = 34.7 bits (76), Expect = 7.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 168 LTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
L +ETGP H+K FT R+G T G S K A+
Sbjct: 194 LVTETGPDHEKTFTAAARVGGVSYGTGTGRSKKEAE 229
>UniRef50_Q6YPW7 Cluster: Ribonuclease 3; n=3; Candidatus
Phytoplasma|Rep: Ribonuclease 3 - Onion yellows
phytoplasma
Length = 238
Score = 34.7 bits (76), Expect = 7.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 153 VNELARYNKIKHQYRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
+ E+ + K QY++ E GPAH K F + L + T EGS+ K A+
Sbjct: 159 LQEIVQSEKKTIQYKIVQEQGPAHSKNFVAEVYLEKNLLGTGEGSTKKAAE 209
>UniRef50_Q6ANV0 Cluster: Ribonuclease 3; n=1; Desulfotalea
psychrophila|Rep: Ribonuclease 3 - Desulfotalea
psychrophila
Length = 241
Score = 34.7 bits (76), Expect = 7.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 166 YRLTSETGPAHKKVFTVTLRLGEAEEYTAEGSSIKRAQ 203
YRL +E GP+HKK FT+++ + T E S K A+
Sbjct: 190 YRLDNEEGPSHKKRFTISVLFRDEVLGTGEAGSKKEAE 227
>UniRef50_Q8KAN7 Cluster: Ribonuclease 3; n=9; Chlorobiaceae|Rep:
Ribonuclease 3 - Chlorobium tepidum
Length = 272
Score = 34.7 bits (76), Expect = 7.8
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 396 PHYAVLEERGAARRREFLVR--CDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGST 453
P Y V+ E GA + F+V C+ P G P KK A++ AA AM+ + +G
Sbjct: 206 PLYTVITEEGAEHEKTFVVEVSCNGQP-LGRGTAPRKKDAEQLAAKE---AMKRLESGDL 261
Query: 454 GN 455
GN
Sbjct: 262 GN 263
>UniRef50_Q9KA05 Cluster: Ribonuclease 3; n=38; Bacilli|Rep:
Ribonuclease 3 - Bacillus halodurans
Length = 263
Score = 34.7 bits (76), Expect = 7.8
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 397 HYAVLEERGAARRREFLVRCDAPPHS-ATGRGPNKKTAKRRAAHNVLLAM 445
HY +++ERG A REF+ + G G +KK A++ AA L+ +
Sbjct: 208 HYEIVQERGPAHNREFVSEVVLNNETLGVGTGRSKKEAEQHAAQQALITL 257
>UniRef50_P78563 Cluster: Double-stranded RNA-specific editase 1;
n=84; Coelomata|Rep: Double-stranded RNA-specific
editase 1 - Homo sapiens (Human)
Length = 741
Score = 34.7 bits (76), Expect = 7.8
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 398 YAVLEERGAARRREFLVRCDAPPHSATGRGPNKKTAKRRAAHNVLLAMEMITNGS----- 452
Y +L + G F++ + G GP KK AK AA L + N S
Sbjct: 95 YTLLSQTGPVHAPLFVMSVEVNGQVFEGSGPTKKKAKLHAAEKALRSFVQFPNASEAHLA 154
Query: 453 TGNTATVNGSELSTSASSDGSKSNGTDSKNK 483
G T +VN S A + NG ++ +K
Sbjct: 155 MGRTLSVNTDFTSDQADFPDTLFNGFETPDK 185
>UniRef50_Q9H307 Cluster: Pinin; n=22; Tetrapoda|Rep: Pinin - Homo
sapiens (Human)
Length = 717
Score = 34.7 bits (76), Expect = 7.8
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 425 GRGPNKKTAKRRAAHNVLLAMEMITNGSTGNTATVNGSELSTSASSDGSKSNGTDSKNKV 484
GR NK + R + + + T+ S+G++++ +GS S S+SS S ++G+ S++
Sbjct: 564 GRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSS-SGSSSSRSSSSSSSSTSGSSSRDSS 622
Query: 485 SDIAAS 490
S ++S
Sbjct: 623 SSTSSS 628
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.314 0.128 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,993,958
Number of Sequences: 1657284
Number of extensions: 14878356
Number of successful extensions: 53751
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 53510
Number of HSP's gapped (non-prelim): 250
length of query: 648
length of database: 575,637,011
effective HSP length: 106
effective length of query: 542
effective length of database: 399,964,907
effective search space: 216780979594
effective search space used: 216780979594
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 76 (34.7 bits)
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