GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002694-TA|BGIBMGA002694-PA|undefined
         (1821 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    27   3.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    27   4.5  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          27   6.0  

>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 613 LVPVFPKEIHLRLINAGLLPRIMNQKLTHIEYANGESFDSATVGSYLVALEQ 664
           ++P  P E+H +L N   +PR++ Q ++      GE F   T G + + L Q
Sbjct: 70  VLPTDPLELHEKLENETDIPRMVVQNISRPNL--GELFQKLTTGFFSLNLFQ 119


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 15/88 (17%), Positives = 40/88 (45%)

Query: 1684 EEVKRIEEARKEVNSAADDEDQRSLXXXXXXKRASHDSMREYILRKHYLEKCAQTPTKGP 1743
            ++ ++  +A+K+   A + E  R        ++A HD    + +++  L++  ++  +  
Sbjct: 817  QQEEQTAQAKKDAMGAVEAEIARIQASIDKEQQARHDLQTNHKVKQQALKRSTESMEERK 876

Query: 1744 PSPVSHSTPASDKKKETSRSSKRVSWAE 1771
             + V+ S      ++E S   +R   +E
Sbjct: 877  RTRVALSAALEQARQEASEKGERPDESE 904


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query: 1037 ELFVSRGKIENALKLMLEQL 1056
            E F+ RGK++ A+K  LE+L
Sbjct: 368  EQFIGRGKVDQAVKKQLEEL 387


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.135    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,646,329
Number of Sequences: 2123
Number of extensions: 62606
Number of successful extensions: 102
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 100
Number of HSP's gapped (non-prelim): 3
length of query: 1821
length of database: 516,269
effective HSP length: 74
effective length of query: 1747
effective length of database: 359,167
effective search space: 627464749
effective search space used: 627464749
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 55 (26.2 bits)