Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002693-TA|BGIBMGA002693-PA|IPR006162|Phosphopantetheine
attachment site, IPR001849|Pleckstrin-like,
IPR001331|Guanine-nucleotide dissociation stimulator, CDC24,
IPR000219|DH
(749 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr... 62 4e-10
SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr 2||... 41 7e-04
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 37 0.012
SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr 1||... 37 0.012
SPCC63.04 |mok14||alpha-1,3-glucan synthase Mok14|Schizosaccharo... 32 0.25
SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps90... 32 0.25
SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein |Schizo... 31 0.44
SPAC6G9.03c |mug183||histone chaperone Rtt106-like|Schizosacchar... 30 1.3
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 29 1.8
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 29 2.4
SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr 1||... 28 4.1
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 28 4.1
SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces ... 28 5.4
SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr 1||... 28 5.4
SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|ch... 27 7.2
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 27 7.2
SPBC21C3.19 |||DUF1960 family protein|Schizosaccharomyces pombe|... 27 7.2
SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type tran... 27 7.2
>SPAC16E8.09 |scd1|ral1|RhoGEF Scd1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 872
Score = 61.7 bits (143), Expect = 4e-10
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 15/199 (7%)
Query: 413 LFGNLHELFTFHQDVFLKDLERCISAT---ELVALCFVEKRETFFRLYSYYCQNIPRSER 469
+F NL+E+ F Q FL LE +S + + F+ E F +Y +C N P +++
Sbjct: 271 IFTNLNEILDF-QRRFLVGLEMNLSLPVEEQRLGALFIALEEGF-SVYQVFCTNFPNAQQ 328
Query: 470 LRETLVDTHLFLQACQLRLGHKLPLAAYLLKPVQRITKYQLLLKDLLRYSECG-SMTTGL 528
L ++D L L L A L+KP+QRI KY LLL LL+ + G L
Sbjct: 329 L---IIDNQNQLLKVANLLEPSYELPALLIKPIQRICKYPLLLNQLLKGTPSGYQYEEEL 385
Query: 529 QQALDCMLVVLKCVNDSMHQIAITGVPVDLSQ-----QGELLMQGSFLVVSENKXXXXXX 583
+Q + C++ V VN++ ++L Q +G L L+V +
Sbjct: 386 KQGMACVVRVANQVNETRRIHENRNAIIELEQRVIDWKGYSLQYFGQLLVWD-VVNVCKA 444
Query: 584 XXXXXXHIFLYEKAMLFCK 602
H++L+EK +L CK
Sbjct: 445 DIEREYHVYLFEKILLCCK 463
>SPBC29A3.17 |gef3||RhoGEF Gef3|Schizosaccharomyces pombe|chr
2|||Manual
Length = 525
Score = 40.7 bits (91), Expect = 7e-04
Identities = 33/123 (26%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 406 LVGQADVLFGNLHELFTFHQDVFLKDLERCISATELVALCFVEKRETFFRLYSYYC---Q 462
L QA + +H+ + L D + C+ VA F+ +Y YC +
Sbjct: 121 LCKQASLFEIEMHKSLNDEINYILDDQDACLKPKPSVAQLFLSWLPKLSAVYGRYCVIQE 180
Query: 463 NIPRSERLRETLVDTHLFLQACQLRL---GHKLPLAAYLLKPVQRITKYQLLLKDLLRYS 519
NI + +LQ C + L ++L+KPVQR KY LLL L R +
Sbjct: 181 NIGKKVEKWMKNSSISEYLQECDSMAKIESNSWNLDSFLVKPVQRFLKYPLLLNQLYRSA 240
Query: 520 ECG 522
G
Sbjct: 241 SLG 243
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 485 QLRLGHKLPLAAYLLKPVQRITKYQLLLKDLLRYSECGS 523
+L+ KL L YL KP R+ +Y LLL+ +L+Y++ G+
Sbjct: 747 RLKESRKLELNGYLTKPTTRLARYPLLLEAVLKYTDEGN 785
>SPAC1006.06 |rgf2||RhoGEF Rgf2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1158
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 485 QLRLGHKLPLAAYLLKPVQRITKYQLLLKDLLRYSE 520
+LR KL L YL KP R+ +Y LLL +L+Y++
Sbjct: 573 RLRESRKLELNGYLTKPTTRLARYPLLLSGVLKYTD 608
>SPCC63.04 |mok14||alpha-1,3-glucan synthase
Mok14|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1369
Score = 32.3 bits (70), Expect = 0.25
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 59 KKNENPTTRKKSRLRRSASDSTLFSDYANQLTLFENE---MNRNKCKKT 104
K N++ ++KK + + D L +D AN LTL +N+ M R+ CK+T
Sbjct: 207 KFNKSGRSKKKDSWLKRSKDELLRTDSANLLTLNDNDEPVMIRHSCKRT 255
>SPBC4F6.10 |vps901|vps9a|guanyl-nucleotide exchange factor Vps901
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 537
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 462 QNIPRSERLRETLVDTHLFLQACQLRLGHKLPLAAYLLKPVQRITK------YQL-LLKD 514
+N P + + E + D H+FL+ QLR P+A YL + TK YQ+ L++D
Sbjct: 100 ENNPGQQEINEPIFDFHMFLE--QLRSSSAEPVAKYLKSFLSEFTKRRWTVNYQVKLIRD 157
Query: 515 LLRY 518
L++
Sbjct: 158 FLKF 161
>SPAC1006.08 |etd1||ethanol-hypersensitive mutant protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 391
Score = 31.5 bits (68), Expect = 0.44
Identities = 41/154 (26%), Positives = 64/154 (41%), Gaps = 15/154 (9%)
Query: 69 KSRLRRSAS--DSTLFSDYANQLTLFENEMNRNKCKKTASDVTKNTRIKYNPRNIKPVRM 126
KS ++R+AS DST S + NE+N+ CKKTA N+ K + + +
Sbjct: 110 KSTVQRNASGADSTSLSHFT------ANEINKGNCKKTALSNEFNSANKGSKASGVGAEL 163
Query: 127 EPFTGNFFYGMPLPGYE-NSEKTEEKIIYLPDSDI-VTASEDTAAESLTTAATVVDIPE- 183
P F G E +S + E + ++ + T ED +++ + PE
Sbjct: 164 -PSVNGFIEGELHDDNETDSFRINELAKQIQETSLGATTQEDESSDGICWDELSTTSPES 222
Query: 184 -YVKNPIYGCNEEDVHISTPDYSTDTSFSKDSQL 216
V PI N + HI+ S+D FS L
Sbjct: 223 SKVSEPIIQDNTQTTHINND--SSDIRFSSRCDL 254
>SPAC6G9.03c |mug183||histone chaperone
Rtt106-like|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 141 GYENSEKTEEKIIYLPDSDIVTASEDTAAESLTTAATVVDIPEYVKNPIYGCNEEDVHIS 200
G +S EEK +P + V+ + A SL + DI VK P++ N+EDV S
Sbjct: 282 GLMDSSLAEEKAAPVPKNPSVSYLNE--ASSLENVDDMDDID--VKEPLFSDNDEDVENS 337
Query: 201 TPDYSTDTSFSKDSQ 215
+ +++ S+D +
Sbjct: 338 DSEDGSESIGSEDEE 352
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 450 RETFFRLYSYYCQNIPRSERLRETLVDTHLFLQA 483
+ F RLYS Y +SE ETL++T+L L +
Sbjct: 117 KSIFLRLYSKYLAGEKKSEEENETLLNTNLTLSS 150
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 182 PEYVKNPIYGCNEED-VHISTPDYSTDTSFSKDSQLKSTSCTELRDAMTNGKPEDVLSKI 240
P YV + +G + +D VH S P Y+T + +TS E D + + ++ K
Sbjct: 497 PGYVTSDDFGEDGDDTVHTSVPSYATPNILQAQAGFNATSSPETIDVVFLNFLQSIVLKA 556
Query: 241 LHD 243
L++
Sbjct: 557 LNN 559
>SPAC31A2.16 |gef2||RhoGEF Gef2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1101
Score = 28.3 bits (60), Expect = 4.1
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 9/129 (6%)
Query: 401 LLPPTLVGQADVLFGNLHELFTFHQDVFLKDL-ERCISATELVALCFVEKRETFFRLYSY 459
L PP L + L E D+ +D+ E+ +L C E FF +
Sbjct: 279 LFPPCLNKLIQLNSAFLDEFEAIMSDLNFEDIDEKKFEEIDLRLACCFESH--FFAFSQH 336
Query: 460 YCQNIPRSE------RLRETLVDTHLFLQACQLRLGHKLPLAAYLLKPVQRITKYQLLLK 513
Y + + +S ++ + F +L + L+ +++PVQRI +Y L L
Sbjct: 337 YPRYLEQSNDFGNVLKMASKIPKFVEFHDQVKLNANMNVGLSQLIMEPVQRIPRYSLFLD 396
Query: 514 DLLRYSECG 522
++ ++ G
Sbjct: 397 QIILLTQEG 405
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 187 NPIYGCNEEDVHISTPDYSTDTSFSKDSQLKST 219
N IY N+ VHI T DYS + F + ST
Sbjct: 24 NVIYPLNDSTVHIETSDYSGNFVFDRVFHPSST 56
>SPAC2F3.12c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 279
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Query: 126 MEPFTGNFFYGMPLPGYE----NSEKTEEKIIYLPDSDIVTASEDTAAESLTTAATVVDI 181
M F + +G GY+ N + E K ++ + E+L D
Sbjct: 1 MTSFPASHGFGPRKRGYQMDLTNVQPVENKPAWISMKSPLEKEIANEYEALKVTERKEDT 60
Query: 182 PEYVKNPIYGCNEEDVHISTPDYSTDTSFSKDSQLKSTSCTELRDAMTNGKPEDVLSKIL 241
+Y + ++ N+ V + Y+T + DS+L+ ++L + E L +
Sbjct: 61 QDYNEPELHNSNDPTVDLYADTYATQAATESDSELEDALFSQLDEFDDTAYREQRLEMLK 120
Query: 242 HDYKKI 247
++ ++
Sbjct: 121 KEFARV 126
>SPAC24H6.09 |gef1||RhoGEF Gef1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 753
Score = 27.9 bits (59), Expect = 5.4
Identities = 10/23 (43%), Positives = 18/23 (78%)
Query: 494 LAAYLLKPVQRITKYQLLLKDLL 516
L + ++KP+QR+ KY LLL+ ++
Sbjct: 455 LGSLIIKPLQRLLKYPLLLQKII 477
>SPCC1393.07c |mug4||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 845
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 147 KTEEKIIYLPDSDIVTASEDTAAESLTTAATVVDIPEYVKNPIYGCNEEDVHI-STP 202
KTE +I+ LP +DIV D T+ P Y K+ + C + + + +TP
Sbjct: 585 KTEGRIVLLPRNDIVLIQADQPTSVFDLCWTIK--PTYEKSSNFSCLQLPIPVLNTP 639
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 27.5 bits (58), Expect = 7.2
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 2/92 (2%)
Query: 61 NENPTTRKKSRLRRSASDSTLFSDYANQLTLFENEMNRNKCKKTASDVTKNTRIKYNPRN 120
N PT RKK + + ++S+ N + + K +RI+
Sbjct: 296 NRKPTLRKKKSIPKKQNESSSTIQKENTVQQEASSSEEEAVKSLPETQRTTSRIETQEEE 355
Query: 121 IKPVRMEPFTGNFFYGMPLPGYENSEKTEEKI 152
IK ME +P YE+ + E+K+
Sbjct: 356 IKEEEMEGEEEE--EEEEVPNYESENELEDKV 385
>SPBC21C3.19 |||DUF1960 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 106
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 204 YSTDTSFSKDSQLKSTSCTELRDAMTNGKPEDVLSKILHDYKKI 247
++T + + QL + S EL + K DV++KIL D K I
Sbjct: 51 FTTSNNKGNEGQLITASKQELENTFGTSKDVDVVTKILTDGKII 94
>SPCC290.04 |ams2|SPCC4F11.01|cell cycle regulated GATA-type
transcription factor Ams2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 697
Score = 27.5 bits (58), Expect = 7.2
Identities = 17/63 (26%), Positives = 27/63 (42%)
Query: 57 YYKKNENPTTRKKSRLRRSASDSTLFSDYANQLTLFENEMNRNKCKKTASDVTKNTRIKY 116
Y++ PTT +K + S S LF +Q L + K S V K+ I+
Sbjct: 583 YFRTPPKPTTLQKQQQSPSPWRSELFLSDPDQNVLTPRHKPKFDLSKALSSVAKSNNIEN 642
Query: 117 NPR 119
+P+
Sbjct: 643 SPQ 645
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.132 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,356,422
Number of Sequences: 5004
Number of extensions: 139481
Number of successful extensions: 425
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 410
Number of HSP's gapped (non-prelim): 21
length of query: 749
length of database: 2,362,478
effective HSP length: 78
effective length of query: 671
effective length of database: 1,972,166
effective search space: 1323323386
effective search space used: 1323323386
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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