GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002692-TA|BGIBMGA002692-PA|IPR001251|Cellular
retinaldehyde-binding/triple function, C-terminal
         (480 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    31   0.028
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    31   0.028
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    27   0.46 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   3.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   3.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   5.6  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   7.5  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    23   7.5  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 30.7 bits (66), Expect = 0.028
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 236 YKALKSELSIATTQGEDLLTQVRKPNLTYNIISHVAAVERLLVQLEETEKQF 287
           ++A+K + ++   +G+ L+ Q+    +TYNIIS  AAV RL +   E  + F
Sbjct: 22  WEAIKKDAAV-NMEGQFLVRQIYDDEITYNIIS--AAVNRLNIPANEILELF 70


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 30.7 bits (66), Expect = 0.028
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 236 YKALKSELSIATTQGEDLLTQVRKPNLTYNIISHVAAVERLLVQLEETEKQF 287
           ++A+K + ++   +G+ L+ Q+    +TYNIIS  AAV RL +   E  + F
Sbjct: 22  WEAIKKDAAV-NMEGQFLVRQIYDDEITYNIIS--AAVNRLNIPANEILELF 70


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 26.6 bits (56), Expect = 0.46
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 350 KLCNCDLDTASSVIDDGDKL 369
           K CNCD+D  + V+  G K+
Sbjct: 476 KRCNCDIDCINRVVQRGTKM 495


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 166 ERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKLDDF 209
           ER Q+  D+   ++Y HS+ +  R    K   L  E   KL DF
Sbjct: 698 ERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDF 741


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)

Query: 166 ERSQLTPDLGGELQYSHSEWIQQRIALEKFSTLMKETSTKLDDF 209
           ER Q+  D+   ++Y HS+ +  R    K   L  E   KL DF
Sbjct: 736 ERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDF 779


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.0 bits (47), Expect = 5.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query: 197  TLMKETSTKLDDFMHEIVDCDMGNDPTQTK 226
            T +KET  K+   M  +V C  G    +TK
Sbjct: 1692 TQVKETDDKICFTMRPVVSCASGCTAVETK 1721


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 192 LEKFSTLMKETSTKLDDFMHEIVDCDMGN 220
           L K  TL  + +T+  DF+ +++ C+M N
Sbjct: 288 LSKIQTL--KLATRYIDFLFQVLHCNMEN 314


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query: 240 KSELSIATTQGEDLLTQVRKPNLT 263
           KSE+S+AT Q    +  + K NL+
Sbjct: 105 KSEISLATKQACGFIDNIDKRNLS 128


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.133    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,007
Number of Sequences: 429
Number of extensions: 4439
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 8
length of query: 480
length of database: 140,377
effective HSP length: 60
effective length of query: 420
effective length of database: 114,637
effective search space: 48147540
effective search space used: 48147540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)