GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002691-TA|BGIBMGA002691-PA|undefined
         (566 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.3  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   5.7  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    23   5.7  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    23   7.5  

>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 98  ENGNPNLTNMQGQYTIEFEPQVDGESGELDVDT 130
           +NGNPN +       + ++P    E   LD+ T
Sbjct: 473 KNGNPNPSEENPLINVTWKPVTRNEMNFLDIGT 505


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 98  ENGNPNLTNMQGQYTIEFEPQVDGESGELDVDT 130
           +NG+PN T       + ++P    E   LD+ T
Sbjct: 473 KNGDPNPTEENPLINVTWKPVTRNEMNFLDIGT 505


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 98  ENGNPNLTNMQGQYTIEFEPQVDGESGELDVDT 130
           +NG+PN T       + ++P    E   LD+ T
Sbjct: 473 KNGDPNPTEENPLINVTWKPVTRNEMNFLDIGT 505


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 3/29 (10%)

Query: 292 KHATNFLKEYLKQHANSPKDVQPSGEGKK 320
           K ATN L+ +L QH   P    PS + KK
Sbjct: 343 KVATNILRAWLFQHLTHP---YPSEDQKK 368


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.315    0.132    0.389 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,070
Number of Sequences: 317
Number of extensions: 4514
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 4
length of query: 566
length of database: 114,650
effective HSP length: 60
effective length of query: 506
effective length of database: 95,630
effective search space: 48388780
effective search space used: 48388780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 45 (22.2 bits)