GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002690-TA|BGIBMGA002690-PA|undefined
         (106 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF032356-1|AAB87976.1|  123|Homo sapiens variable immunoglobulin...    29   2.7  
BC063111-1|AAH63111.1|  493|Homo sapiens GGT6 protein protein.         29   3.5  
AK129501-1|BAC85168.1|  151|Homo sapiens protein ( Homo sapiens ...    29   3.5  
U17074-1|AAC50074.1|  168|Homo sapiens p18 protein.                    28   6.2  
CR450289-1|CAG29285.1|  168|Homo sapiens CDKN2C protein.               28   6.2  
BC016173-1|AAH16173.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
BC005041-1|AAH05041.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
BC000598-1|AAH00598.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AY094608-1|AAM11873.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AL590455-1|CAH71955.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AL359977-3|CAH70191.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AL359707-2|CAC78760.1| 1166|Homo sapiens tankyrase, TRF1-interac...    28   6.2  
AF438201-1|AAL40795.1| 1166|Homo sapiens tankyrase II protein.         28   6.2  
AF342982-1|AAK25811.1| 1166|Homo sapiens tankyrase 2 protein.          28   6.2  
AF329696-1|AAK13463.1| 1166|Homo sapiens tankyrase 2 protein.          28   6.2  
AF309033-1|AAK82330.1| 1166|Homo sapiens tankyrase-2 protein.          28   6.2  
AF305081-1|AAG25674.1| 1265|Homo sapiens tankyrase-related prote...    28   6.2  
AF264912-1|AAG44694.1| 1166|Homo sapiens tankyrase-like protein ...    28   6.2  
AF058759-1|AAF28398.1|   44|Homo sapiens cyclin-dependent kinase...    28   6.2  
AF041250-1|AAC39783.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AF041248-1|AAC39782.1|  168|Homo sapiens cyclin-dependent kinase...    28   6.2  
AK074646-1|BAC11110.1|  461|Homo sapiens protein ( Homo sapiens ...    27   8.2  

>AF032356-1|AAB87976.1|  123|Homo sapiens variable immunoglobulin
           anti-HLA heavy chain protein.
          Length = 123

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 56  PGGHVYGESEYTFHSSSDINGQKT 79
           PGG+ YGE  Y +H   D+ G  T
Sbjct: 94  PGGYTYGEDNYYYHYRLDVWGPWT 117


>BC063111-1|AAH63111.1|  493|Homo sapiens GGT6 protein protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 45  SAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQKTDKSGGHKI 87
           S GS+ S+ P PGGH +G   Y   +     G++   +GG+ +
Sbjct: 84  STGSLGSVAPPPGGHSHGPGVYHHGAIISPAGRELLVAGGNVV 126


>AK129501-1|BAC85168.1|  151|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25990 fis, clone DMC02673. ).
          Length = 151

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 14/43 (32%), Positives = 23/43 (53%)

Query: 45  SAGSVKSLKPIPGGHVYGESEYTFHSSSDINGQKTDKSGGHKI 87
           S GS+ S+ P PGGH +G   Y   +     G++   +GG+ +
Sbjct: 84  STGSLGSVAPPPGGHSHGPGVYHHGAIISPAGRELLVAGGNVV 126


>U17074-1|AAC50074.1|  168|Homo sapiens p18 protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>CR450289-1|CAG29285.1|  168|Homo sapiens CDKN2C protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>BC016173-1|AAH16173.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C (p18, inhibits CDK4) protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>BC005041-1|AAH05041.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C (p18, inhibits CDK4) protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>BC000598-1|AAH00598.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C (p18, inhibits CDK4) protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AY094608-1|AAM11873.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AL590455-1|CAH71955.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C (p18, inhibits CDK4) protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AL359977-3|CAH70191.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor 2C (p18, inhibits CDK4) protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AL359707-2|CAC78760.1| 1166|Homo sapiens tankyrase,
          TRF1-interacting ankyrin-related ADP-ribose polymerase
          2 protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF438201-1|AAL40795.1| 1166|Homo sapiens tankyrase II protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF342982-1|AAK25811.1| 1166|Homo sapiens tankyrase 2 protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF329696-1|AAK13463.1| 1166|Homo sapiens tankyrase 2 protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF309033-1|AAK82330.1| 1166|Homo sapiens tankyrase-2 protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF305081-1|AAG25674.1| 1265|Homo sapiens tankyrase-related protein
           protein.
          Length = 1265

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10  PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
           P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 123 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 154


>AF264912-1|AAG44694.1| 1166|Homo sapiens tankyrase-like protein
          protein.
          Length = 1166

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 10 PIGDELFDAASSGDWEKVHELIN-SKLNENDS 40
          P   ELF+A  +GD E+V  L+   K+N  D+
Sbjct: 23 PAARELFEACRNGDVERVKRLVTPEKVNSRDT 54


>AF058759-1|AAF28398.1|   44|Homo sapiens cyclin-dependent kinase
          inhibitor 2C protein.
          Length = 44

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AF041250-1|AAC39783.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AF041248-1|AAC39782.1|  168|Homo sapiens cyclin-dependent kinase
          inhibitor protein.
          Length = 168

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 10 PIGDELFDAASSGDWEKVHELINSKLNEN 38
          P G+EL  AA+ GD E++  L+ + +N N
Sbjct: 4  PWGNELASAAARGDLEQLTSLLQNNVNVN 32


>AK074646-1|BAC11110.1|  461|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90165 fis, clone MAMMA1000106. ).
          Length = 461

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)

Query: 45  SAGSVKSLKPIPGGHVYGESEY 66
           S GS+ S+ P PGGH +G   Y
Sbjct: 84  STGSLGSVAPPPGGHSHGPGVY 105


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.309    0.133    0.398 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,260,153
Number of Sequences: 224733
Number of extensions: 693707
Number of successful extensions: 1157
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1135
Number of HSP's gapped (non-prelim): 29
length of query: 106
length of database: 73,234,838
effective HSP length: 79
effective length of query: 27
effective length of database: 55,480,931
effective search space: 1497985137
effective search space used: 1497985137
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
S2: 58 (27.5 bits)