GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002689-TA|BGIBMGA002689-PA|undefined
         (71 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457277-1|CAG33558.1|  240|Homo sapiens FLJ11088 protein.             27   7.1  
BC028682-1|AAH28682.1|  411|Homo sapiens CCDC91 protein protein.       27   7.1  
AY289196-1|AAP42284.1|  441|Homo sapiens p56 protein.                  27   7.1  
AK001950-1|BAA91995.1|  240|Homo sapiens protein ( Homo sapiens ...    27   7.1  

>CR457277-1|CAG33558.1|  240|Homo sapiens FLJ11088 protein.
          Length = 240

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 16  KTHVAGDNEQYTGEXXXXXXXXXTVNGKTVSSGGVSELTNDGKAVEEKVMEYKD 69
           KT  A D E+ + E          ++ +TV +  + E     KAVEE V   +D
Sbjct: 140 KTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRD 193


>BC028682-1|AAH28682.1|  411|Homo sapiens CCDC91 protein protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 16  KTHVAGDNEQYTGEXXXXXXXXXTVNGKTVSSGGVSELTNDGKAVEEKVMEYKD 69
           KT  A D E+ + E          ++ +TV +  + E     KAVEE V   +D
Sbjct: 311 KTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRD 364


>AY289196-1|AAP42284.1|  441|Homo sapiens p56 protein.
          Length = 441

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 16  KTHVAGDNEQYTGEXXXXXXXXXTVNGKTVSSGGVSELTNDGKAVEEKVMEYKD 69
           KT  A D E+ + E          ++ +TV +  + E     KAVEE V   +D
Sbjct: 341 KTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRD 394


>AK001950-1|BAA91995.1|  240|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11088 fis, clone PLACE1005287, weakly similar to
           INNER CENTROMERE PROTEIN. ).
          Length = 240

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 16  KTHVAGDNEQYTGEXXXXXXXXXTVNGKTVSSGGVSELTNDGKAVEEKVMEYKD 69
           KT  A D E+ + E          ++ +TV +  + E     KAVEE V   +D
Sbjct: 140 KTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRD 193


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.302    0.127    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,603,857
Number of Sequences: 224733
Number of extensions: 209837
Number of successful extensions: 132
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128
Number of HSP's gapped (non-prelim): 4
length of query: 71
length of database: 73,234,838
effective HSP length: 50
effective length of query: 21
effective length of database: 61,998,188
effective search space: 1301961948
effective search space used: 1301961948
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
S2: 57 (27.1 bits)