GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002689-TA|BGIBMGA002689-PA|undefined
         (71 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021242-1|AAX33390.1| 1011|Drosophila melanogaster RE67944p pro...    26   5.6  
AY118439-1|AAM48468.1| 1114|Drosophila melanogaster RH61354p pro...    26   5.6  
AL031640-2|CAA21052.1|  979|Drosophila melanogaster EG:114D9.2 p...    26   5.6  
AE014298-174|AAF45600.2| 1114|Drosophila melanogaster CG14622-PA...    26   5.6  
AE014298-173|AAN09040.1| 1153|Drosophila melanogaster CG14622-PB...    26   5.6  
AE014298-172|AAF45601.2| 1455|Drosophila melanogaster CG14622-PC...    26   5.6  

>BT021242-1|AAX33390.1| 1011|Drosophila melanogaster RE67944p
           protein.
          Length = 1011

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41  NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
           NG + + G   +L   GKA ++KV+   DG
Sbjct: 695 NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 724


>AY118439-1|AAM48468.1| 1114|Drosophila melanogaster RH61354p
           protein.
          Length = 1114

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41  NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
           NG + + G   +L   GKA ++KV+   DG
Sbjct: 656 NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 685


>AL031640-2|CAA21052.1|  979|Drosophila melanogaster EG:114D9.2
           protein.
          Length = 979

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41  NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
           NG + + G   +L   GKA ++KV+   DG
Sbjct: 501 NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 530


>AE014298-174|AAF45600.2| 1114|Drosophila melanogaster CG14622-PA,
           isoform A protein.
          Length = 1114

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41  NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
           NG + + G   +L   GKA ++KV+   DG
Sbjct: 656 NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 685


>AE014298-173|AAN09040.1| 1153|Drosophila melanogaster CG14622-PB,
           isoform B protein.
          Length = 1153

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41  NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
           NG + + G   +L   GKA ++KV+   DG
Sbjct: 695 NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 724


>AE014298-172|AAF45601.2| 1455|Drosophila melanogaster CG14622-PC,
            isoform C protein.
          Length = 1455

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 41   NGKTVSSGGVSELTNDGKAVEEKVMEYKDG 70
            NG + + G   +L   GKA ++KV+   DG
Sbjct: 997  NGVSATDGSYEDLRVTGKAAKQKVLSVIDG 1026


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.302    0.127    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,240,184
Number of Sequences: 52641
Number of extensions: 88200
Number of successful extensions: 89
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83
Number of HSP's gapped (non-prelim): 6
length of query: 71
length of database: 24,830,863
effective HSP length: 51
effective length of query: 20
effective length of database: 22,146,172
effective search space: 442923440
effective search space used: 442923440
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.7 bits)
S2: 53 (25.4 bits)