GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002686-TA|BGIBMGA002686-PA|undefined
         (212 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA bindin...    45   0.002
UniRef50_Q605Q2 Cluster: Hemagglutinin-related protein; n=1; Met...    34   3.0  
UniRef50_A4X6M9 Cluster: Glycosyl transferase, group 1; n=1; Sal...    33   4.0  
UniRef50_Q07HW0 Cluster: Filamentous haemagglutinin family outer...    33   5.2  
UniRef50_Q0RKZ8 Cluster: Putative uncharacterized protein; n=1; ...    33   6.9  
UniRef50_A7CPL2 Cluster: Filamentous haemagglutinin family outer...    32   9.1  

>UniRef50_UPI0000D5737C Cluster: PREDICTED: similar to RNA binding
           motif protein 24; n=3; Endopterygota|Rep: PREDICTED:
           similar to RNA binding motif protein 24 - Tribolium
           castaneum
          Length = 318

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 16/25 (64%), Positives = 20/25 (80%)

Query: 77  GVRAGYPTVLPAHYGLSPGYVYGTP 101
           G+RAGYP +LP  YG+ PGYVY +P
Sbjct: 182 GIRAGYPALLPGQYGMPPGYVYQSP 206


>UniRef50_Q605Q2 Cluster: Hemagglutinin-related protein; n=1;
            Methylococcus capsulatus|Rep: Hemagglutinin-related
            protein - Methylococcus capsulatus
          Length = 3349

 Score = 33.9 bits (74), Expect = 3.0
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 77   GVRAGYPTVLPAHYGLSPGYVYGTP 101
            G++AGY  +LPAHY L PG    TP
Sbjct: 1556 GLKAGYYVLLPAHYALLPGAYLVTP 1580


>UniRef50_A4X6M9 Cluster: Glycosyl transferase, group 1; n=1;
           Salinispora tropica CNB-440|Rep: Glycosyl transferase,
           group 1 - Salinispora tropica CNB-440
          Length = 377

 Score = 33.5 bits (73), Expect = 4.0
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 38  FIASVCRLLVKRHVPG--LQCPGGRLATEIDGFGLXXXXXXGVRAGYPTVLPAHYGLSPG 95
           F  S    +V+RH+    L     R A + D  GL         AG P V   H G+   
Sbjct: 248 FCGSQPPAVVRRHLAAARLLAAPSRTAPDGDSEGLPTTILEAASAGLPVVATYHSGIPEA 307

Query: 96  YVYGTPSYMGA 106
            V+GT   +GA
Sbjct: 308 VVHGTTGLLGA 318


>UniRef50_Q07HW0 Cluster: Filamentous haemagglutinin family outer
            membrane protein; n=1; Rhodopseudomonas palustris
            BisA53|Rep: Filamentous haemagglutinin family outer
            membrane protein - Rhodopseudomonas palustris (strain
            BisA53)
          Length = 4092

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 77   GVRAGYPTVLPAHYGLSPGYVYGTPSYMGA 106
            G+ AGY T+LPA Y L PG    TP  + A
Sbjct: 1672 GLAAGYYTLLPARYALLPGAFLVTPKELSA 1701


>UniRef50_Q0RKZ8 Cluster: Putative uncharacterized protein; n=1;
           Frankia alni ACN14a|Rep: Putative uncharacterized
           protein - Frankia alni (strain ACN14a)
          Length = 620

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)

Query: 39  IASVCRLLVKRHVPGLQCPGG---RLATEIDGFGLXXXXXXGVRAGYPTVLPAHYGLSPG 95
           +A  C  + +R   G   PGG   ++  ++D   +      G+R G+PT   A  GL PG
Sbjct: 510 VAGGCSAMGRRRAAGEPQPGGGAGQVVVQVDAEWIRA----GLRPGHPT---AGDGLGPG 562

Query: 96  YVYGTPSYMGA 106
             + TP  +GA
Sbjct: 563 VTHATPPSLGA 573


>UniRef50_A7CPL2 Cluster: Filamentous haemagglutinin family outer
            membrane protein; n=1; Opitutaceae bacterium TAV2|Rep:
            Filamentous haemagglutinin family outer membrane protein
            - Opitutaceae bacterium TAV2
          Length = 4063

 Score = 32.3 bits (70), Expect = 9.1
 Identities = 16/32 (50%), Positives = 18/32 (56%)

Query: 77   GVRAGYPTVLPAHYGLSPGYVYGTPSYMGAMS 108
            G+ AGY T+LPA Y L PG    TP    A S
Sbjct: 1674 GLPAGYYTLLPARYALLPGAFLVTPGGSAAAS 1705


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.324    0.141    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,548,256
Number of Sequences: 1657284
Number of extensions: 4635153
Number of successful extensions: 5954
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 5950
Number of HSP's gapped (non-prelim): 6
length of query: 212
length of database: 575,637,011
effective HSP length: 97
effective length of query: 115
effective length of database: 414,880,463
effective search space: 47711253245
effective search space used: 47711253245
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 70 (32.3 bits)