Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002685-TA|BGIBMGA002685-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(124 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 25 0.19
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 25 0.19
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 3.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 3.1
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 3.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 3.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 3.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 3.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 3.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 3.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 3.1
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 20 7.1
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 20 7.1
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 20 7.1
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 20 7.1
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 7.1
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 7.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 20 7.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 7.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 7.1
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 20 9.4
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 25.4 bits (53), Expect = 0.19
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREH-FAVYGDIEEAVVITDRQTNKS 69
D T+TK F +P+ T SL + F IE T+ Q N S
Sbjct: 54 DNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDS 99
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 25.4 bits (53), Expect = 0.19
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREH-FAVYGDIEEAVVITDRQTNKS 69
D T+TK F +P+ T SL + F IE T+ Q N S
Sbjct: 56 DNTYTKTFKMNVPFEETLPSLPDRKFQTVTSIEGNTFKTETQVNDS 101
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 201 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 231
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 201 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 231
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.4 bits (43), Expect = 3.1
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + +SR +GF R + ER+C +D N
Sbjct: 212 TSSNSLRSRTHGFQHTSSRYSRERSCSRDRN 242
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 20.6 bits (41), Expect = 5.4
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 111 RGNLAPDTNDNSSK 124
+ NL PD ND SK
Sbjct: 191 KDNLIPDKNDPDSK 204
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 201 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 231
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 212 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 242
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 212 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 242
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 201 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 231
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 212 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 242
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 201 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 231
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 217 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 247
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 212 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 242
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 7.1
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 62 TDRQTNKSRGYGFVIMGDRTAAERAC-KDPN 91
T + ++R +GF R + ER+C +D N
Sbjct: 212 TSSNSLRNRTHGFQHTSSRYSRERSCSRDRN 242
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 19.8 bits (39), Expect = 9.4
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 47 EHFAVYGDIEEAVVITDRQT 66
EHF YG +++ D +T
Sbjct: 336 EHFFEYGGNNIEIIVKDPET 355
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.315 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,129
Number of Sequences: 429
Number of extensions: 1450
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of query: 124
length of database: 140,377
effective HSP length: 51
effective length of query: 73
effective length of database: 118,498
effective search space: 8650354
effective search space used: 8650354
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.6 bits)
S2: 39 (19.8 bits)
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