Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002685-TA|BGIBMGA002685-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(124 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 159 7e-40
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 66 5e-12
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 66 5e-12
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 66 5e-12
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 63 6e-11
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 63 6e-11
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 61 2e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 61 2e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 61 2e-10
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 58 2e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 58 2e-09
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 56 6e-09
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 56 7e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 56 1e-08
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 55 1e-08
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 55 1e-08
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 55 2e-08
Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical pr... 52 1e-07
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 52 1e-07
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 52 1e-07
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 52 1e-07
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 52 1e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 3e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 49 8e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 49 8e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 49 1e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 1e-06
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 4e-06
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 4e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 6e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 6e-06
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 46 8e-06
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 46 8e-06
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 45 2e-05
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 45 2e-05
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 44 3e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 44 4e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 42 1e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 42 1e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 3e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 3e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 7e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 40 7e-04
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 9e-04
AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 9e-04
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 9e-04
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 9e-04
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 9e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 39 0.001
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 39 0.001
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 39 0.001
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 39 0.001
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 38 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.003
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 38 0.003
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 38 0.003
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.003
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 38 0.003
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.004
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 37 0.005
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.006
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 36 0.006
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 35 0.015
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 35 0.015
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 35 0.015
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 35 0.019
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 34 0.026
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.034
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 34 0.034
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 34 0.034
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.059
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 33 0.059
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 33 0.078
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.078
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 33 0.078
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 32 0.14
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 32 0.14
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 32 0.14
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.18
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 0.18
Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 31 0.24
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 31 0.24
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.31
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.31
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.31
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 31 0.31
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 31 0.31
Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 30 0.42
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 29 1.3
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 27 2.9
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 27 3.9
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 5.1
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 27 5.1
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 159 bits (385), Expect = 7e-40
Identities = 72/93 (77%), Positives = 81/93 (87%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G +DT +TK+FVGGLPYHT+DK+L E+F +GDIEEAVVITDR T KSRGYGFV M DR
Sbjct: 28 GSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRA 87
Query: 82 AAERACKDPNPIIDGRKANVNLAILGAKPRGNL 114
+AERACKDPNPIIDGRKANVNLA LGAKPR N+
Sbjct: 88 SAERACKDPNPIIDGRKANVNLAYLGAKPRTNV 120
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGGL +TTD +RE ++ +G+I + +V+ D T +SRG+GFV +T + A K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 90 PNPIIDGRKANVNLAI 105
IIDG+ + A+
Sbjct: 84 RPHIIDGKTVDPKRAV 99
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
+ + + +L+V G+ T+ L E+F YG + ++ +I D+ T K RG+GFV D +
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
Query: 83 AERACKDPNPIIDGRKANV 101
++ + +++G + +V
Sbjct: 168 VDQCVLQKSHMVNGHRCDV 186
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGGL +TTD +RE ++ +G+I + +V+ D T +SRG+GFV +T + A K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 90 PNPIIDGRKANVNLAI 105
IIDG+ + A+
Sbjct: 84 RPHIIDGKTVDPKRAV 99
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
+ + + +L+V G+ T+ L E+F YG + ++ +I D+ T K RG+GFV D +
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
Query: 83 AERACKDPNPIIDGRKANV 101
++ + +++G + +V
Sbjct: 168 VDQCVLQKSHMVNGHRCDV 186
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 66.5 bits (155), Expect = 5e-12
Identities = 30/76 (39%), Positives = 47/76 (61%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGGL +TTD +RE ++ +G+I + +V+ D T +SRG+GFV +T + A K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 90 PNPIIDGRKANVNLAI 105
IIDG+ + A+
Sbjct: 84 RPHIIDGKTVDPKRAV 99
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
+ + + +L+V G+ T+ L E+F YG + ++ +I D+ T K RG+GFV D +
Sbjct: 108 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
Query: 83 AERACKDPNPIIDGRKANV 101
++ + +++G + +V
Sbjct: 168 VDQCVLQKSHMVNGHRCDV 186
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 62.9 bits (146), Expect = 6e-11
Identities = 24/75 (32%), Positives = 49/75 (65%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGL + TT ++LR++F +G++ E +V+ D T ++RG+GF+ D ++ ++ +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 90 PNPIIDGRKANVNLA 104
+DG+K + +A
Sbjct: 106 REHELDGKKIDPKVA 120
Score = 54.8 bits (126), Expect = 2e-08
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 26 TTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER 85
T K+F+GGL +T + ++++F YG +E+A+++ D+ T + RG+GFV A++
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
Query: 86 ACK 88
C+
Sbjct: 191 VCE 193
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 62.9 bits (146), Expect = 6e-11
Identities = 24/75 (32%), Positives = 49/75 (65%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGL + TT ++LR++F +G++ E +V+ D T ++RG+GF+ D ++ ++ +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 90 PNPIIDGRKANVNLA 104
+DG+K + +A
Sbjct: 106 REHELDGKKIDPKVA 120
Score = 54.8 bits (126), Expect = 2e-08
Identities = 21/63 (33%), Positives = 40/63 (63%)
Query: 26 TTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER 85
T K+F+GGL +T + ++++F YG +E+A+++ D+ T + RG+GFV A++
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
Query: 86 ACK 88
C+
Sbjct: 191 VCE 193
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
KLF+GGL + TTD+ L +F+ +G + +A+VI D T SRG+GFV +AE A D
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 90 PNPIIDGRKANVNLAI 105
+ G+ + AI
Sbjct: 110 RPHKLGGKTVDSKRAI 125
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 30 KLFVGGLP--YHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER-- 85
KL + G+ H+ D SLR +F +G +++ ++ + RG GFVI D+ +A+R
Sbjct: 148 KLLLNGITNGVHSVD-SLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 201
Query: 86 ACKDPNPIIDGRKANVNL 103
A I++ RK V +
Sbjct: 202 AHNSGRHIVNERKIEVRV 219
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
KLF+GGL + TTD+ L +F+ +G + +A+VI D T SRG+GFV +AE A D
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 90 PNPIIDGRKANVNLAI 105
+ G+ + AI
Sbjct: 130 RPHKLGGKTVDSKRAI 145
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 30 KLFVGGLP--YHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER-- 85
KL + G+ H+ D SLR +F +G +++ ++ + RG GFVI D+ +A+R
Sbjct: 168 KLLLNGITNGVHSVD-SLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 221
Query: 86 ACKDPNPIIDGRKANVNL 103
A I++ RK V +
Sbjct: 222 AHNSGRHIVNERKIEVRV 239
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
KLF+GGL + TTD+ L +F+ +G + +A+VI D T SRG+GFV +AE A D
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 90 PNPIIDGRKANVNLAI 105
+ G+ + AI
Sbjct: 131 RPHKLGGKTVDSKRAI 146
Score = 33.5 bits (73), Expect = 0.045
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 10/78 (12%)
Query: 30 KLFVGGLP--YHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER-- 85
KL + G+ H+ D SLR +F +G +++ ++ + RG GFVI D+ +A+R
Sbjct: 169 KLLLNGITNGVHSVD-SLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCL 222
Query: 86 ACKDPNPIIDGRKANVNL 103
A I++ RK V +
Sbjct: 223 AHNSGRHIVNERKIEVRV 240
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 21 PGQK----DTT-WTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
PGQ+ DTT +FVG L ++ LRE F +GD+ +A VI D T KS+GYGFV
Sbjct: 9 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 68
Query: 76 IMGDRTAAERACKDPNPIIDGRK 98
R AERA + N GR+
Sbjct: 69 SYPKREEAERAIEQMNGQWLGRR 91
Score = 29.9 bits (64), Expect = 0.55
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T ++VG + T D+ +R+ FA +G I E + K +GY FV ++ AA +A
Sbjct: 128 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 180
Query: 89 DPN 91
N
Sbjct: 181 QMN 183
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 21 PGQK----DTT-WTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
PGQ+ DTT +FVG L ++ LRE F +GD+ +A VI D T KS+GYGFV
Sbjct: 19 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 78
Query: 76 IMGDRTAAERACKDPNPIIDGRK 98
R AERA + N GR+
Sbjct: 79 SYPKREEAERAIEQMNGQWLGRR 101
Score = 29.9 bits (64), Expect = 0.55
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T ++VG + T D+ +R+ FA +G I E + K +GY FV ++ AA +A
Sbjct: 138 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 190
Query: 89 DPN 91
N
Sbjct: 191 QMN 193
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 21 PGQK----DTT-WTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
PGQ+ DTT +FVG L ++ LRE F +GD+ +A VI D T KS+GYGFV
Sbjct: 122 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 181
Query: 76 IMGDRTAAERACKDPNPIIDGRK 98
R AERA + N GR+
Sbjct: 182 SYPKREEAERAIEQMNGQWLGRR 204
Score = 29.9 bits (64), Expect = 0.55
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T ++VG + T D+ +R+ FA +G I E + K +GY FV ++ AA +A
Sbjct: 241 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 293
Query: 89 DPN 91
N
Sbjct: 294 QMN 296
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 58.0 bits (134), Expect = 2e-09
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 21 PGQK----DTT-WTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
PGQ+ DTT +FVG L ++ LRE F +GD+ +A VI D T KS+GYGFV
Sbjct: 90 PGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFV 149
Query: 76 IMGDRTAAERACKDPNPIIDGRK 98
R AERA + N GR+
Sbjct: 150 SYPKREEAERAIEQMNGQWLGRR 172
Score = 29.9 bits (64), Expect = 0.55
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T ++VG + T D+ +R+ FA +G I E + K +GY FV ++ AA +A
Sbjct: 209 TSVYVGNIASLTEDE-IRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 261
Query: 89 DPN 91
N
Sbjct: 262 QMN 264
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 56.4 bits (130), Expect = 6e-09
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VG P+ TT+ L +F+ G++ ++ DR+T + RG+ FV + AA+RA
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 91 NPI-IDGRKANVNLA 104
N + +GR VNLA
Sbjct: 66 NGVDFNGRALRVNLA 80
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 56.0 bits (129), Expect = 7e-09
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VG +PY T++ + +FA G + ++ DR+T + RG+ FV + A+RA +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQL 67
Query: 91 NPI-IDGRKANVNLA 104
N + +GR VN A
Sbjct: 68 NGVAFNGRNLRVNYA 82
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 55.6 bits (128), Expect = 1e-08
Identities = 29/68 (42%), Positives = 37/68 (54%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
+FVG L LRE F +G++ EA +I D TNK +GYGFV R AERA +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 91 NPIIDGRK 98
N GR+
Sbjct: 194 NGAWLGRR 201
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERAC- 87
T L + L Y TT LR F YGDI + + D+ + +S+G+GFV +R AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 88 KDPNPIIDGRKANVNLA 104
+ ++DGR+ V LA
Sbjct: 79 RTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 55.2 bits (127), Expect = 1e-08
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERAC- 87
T L + L Y TT LR F YGDI + + D+ + +S+G+GFV +R AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 88 KDPNPIIDGRKANVNLA 104
+ ++DGR+ V LA
Sbjct: 79 RTDGKLVDGRELRVTLA 95
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 54.8 bits (126), Expect = 2e-08
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VG P+ TT++ L F+ G I ++ DR+T + RG+ F+ + +A+RA +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 91 NPI-IDGRKANVNLA 104
N +GR VNLA
Sbjct: 67 NGAEFNGRPLRVNLA 81
>Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 270
Score = 52.0 bits (119), Expect = 1e-07
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
+FVG L +++ L+ F +G++ EA VI D QT KS+GYGFV ++ AE A
Sbjct: 29 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 88
Query: 91 NPIIDGRKA 99
N G++A
Sbjct: 89 NGKWIGKRA 97
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T ++VG + TTD LR+ F+ YGDI E + K++ Y FV + A +A
Sbjct: 129 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIM 182
Query: 89 DPN 91
+ N
Sbjct: 183 EMN 185
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
+ + + +L+V G+ T+ L E+F YG + ++ +I D+ T K RG+GFV D +
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Query: 83 AERACKDPNPIIDGRKANV 101
++ + +++G + +V
Sbjct: 130 VDQCVLQKSHMVNGHRCDV 148
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 45 LREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPNPIIDGRKANVNLA 104
+RE ++ +G+I + +V+ D T +SRG+GFV +T + A K IIDG+ + A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 105 I 105
+
Sbjct: 61 V 61
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 52.0 bits (119), Expect = 1e-07
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
+ + + +L+V G+ T+ L E+F YG + ++ +I D+ T K RG+GFV D +
Sbjct: 70 ESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
Query: 83 AERACKDPNPIIDGRKANV 101
++ + +++G + +V
Sbjct: 130 VDQCVLQKSHMVNGHRCDV 148
Score = 48.8 bits (111), Expect = 1e-06
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 45 LREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPNPIIDGRKANVNLA 104
+RE ++ +G+I + +V+ D T +SRG+GFV +T + A K IIDG+ + A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 105 I 105
+
Sbjct: 61 V 61
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 52.0 bits (119), Expect = 1e-07
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGGLP +++ LR HF +G +++ D+QT R + F++ + +A++A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 90 PNPIIDGRKANVNLAI 105
R+ +V A+
Sbjct: 171 TKQTFGTRECDVKKAV 186
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGG+ ++ L HF YG++ +A V DR +SRG+ FV + A
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 90 PNPIIDGRKANVNLA 104
I G+ V A
Sbjct: 90 REQTIKGKSVEVKPA 104
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 52.0 bits (119), Expect = 1e-07
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGGLP +++ LR HF +G +++ D+QT R + F++ + +A++A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Query: 90 PNPIIDGRKANVNLAI 105
R+ +V A+
Sbjct: 171 TKQTFGTRECDVKKAV 186
Score = 46.8 bits (106), Expect = 4e-06
Identities = 24/75 (32%), Positives = 35/75 (46%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+FVGG+ ++ L HF YG++ +A V DR +SRG+ FV + A
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 90 PNPIIDGRKANVNLA 104
I G+ V A
Sbjct: 90 REQTIKGKSVEVKPA 104
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 50.8 bits (116), Expect = 3e-07
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + + LFVG + Y T++ LR F YG I++ ++ D + K RGY F+ D+
Sbjct: 96 PRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYSDK 154
Query: 81 TAAERACKDPNPI-IDGRKANVN 102
A K + I +DG++ V+
Sbjct: 155 AEMHTAYKKADGIKVDGKRLVVD 177
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 49.2 bits (112), Expect = 8e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T +FV H + L F+ +G+I AVV+TD Q K +G+GFV D+
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Query: 82 AAERACKDPN-PIIDGRKANVNL 103
AA +A + N I++G +++
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSV 312
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V + D LR+HF+ +G I A V+ D + +S+G+GFV A A D
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 91 NPIIDGRK 98
N + G K
Sbjct: 404 NSKMIGAK 411
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
+F+ L +KS+ + F+++G+I V TD + N S+GYGFV +A+ A +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIEKV 205
Query: 91 NPII 94
N ++
Sbjct: 206 NGML 209
Score = 33.1 bits (72), Expect = 0.059
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 2 LMAGALPAESDGLLALGALPGQ----KDTTWT--KLFVGGLPYHTTDKSLREHFAVYGDI 55
++AGA+ + ++ G P + T++ L++G L ++ L E F++ G +
Sbjct: 24 VVAGAVAGQPQAVIQQGPPPTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPV 83
Query: 56 EEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPN-PIIDGRKANV 101
V D + S GY +V AERA N +I GR +
Sbjct: 84 LSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRI 130
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 49.2 bits (112), Expect = 8e-07
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T +FV H + L F+ +G+I AVV+TD Q K +G+GFV D+
Sbjct: 231 GESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Query: 82 AAERACKDPN-PIIDGRKANVNL 103
AA +A + N I++G +++
Sbjct: 290 AAGQAVEKLNDSILEGTDCKLSV 312
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V + D LR+HF+ +G I A V+ D + +S+G+GFV A A D
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 91 NPIIDGRK 98
N + G K
Sbjct: 404 NSKMIGAK 411
Score = 35.9 bits (79), Expect = 0.008
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
+F+ L +KS+ + F+++G+I V TD + N S+GYGFV +A+ A +
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIEKV 205
Query: 91 NPII 94
N ++
Sbjct: 206 NGML 209
Score = 33.1 bits (72), Expect = 0.059
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 2 LMAGALPAESDGLLALGALPGQ----KDTTWT--KLFVGGLPYHTTDKSLREHFAVYGDI 55
++AGA+ + ++ G P + T++ L++G L ++ L E F++ G +
Sbjct: 24 VVAGAVAGQPQAVIQQGPPPTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPV 83
Query: 56 EEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPN-PIIDGRKANV 101
V D + S GY +V AERA N +I GR +
Sbjct: 84 LSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTMNFEVIHGRPMRI 130
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 48.8 bits (111), Expect = 1e-06
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV---IMGDRTAA-ERA 86
L V L +TT+K LR+ F +G+I + ++ DR + SRG+GF+ ++ D TAA ++
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKL 137
Query: 87 CKDPNPIIDGRKANVNLAI 105
C N +DG K V+ ++
Sbjct: 138 C---NTDLDGHKIRVDFSL 153
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.4 bits (110), Expect = 1e-06
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAE 84
D + +FVG + Y ++ ++R F+ G++ ++ DR+T K +GYGF+ D AE
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAE 73
Query: 85 RACKDPNPI-IDGRKANVNLAILG 107
A ++ N + GR V+ A G
Sbjct: 74 VAIRNLNGYELSGRILRVDSAAGG 97
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 46.8 bits (106), Expect = 4e-06
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 13 GLLALGALPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGY 72
G AL P + ++FVGG P TT+ LREHF + +++ ++ +S+GY
Sbjct: 50 GAAALIPAPPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGY 108
Query: 73 GFVIMGDRTAAERACKDPNPIIDGRKANVNL 103
GF+ AE K ++ R +NL
Sbjct: 109 GFITFETEDQAEEIRKLTPKQLEFRSRKLNL 139
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 46.8 bits (106), Expect = 4e-06
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 13 GLLALGALPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGY 72
G AL P + ++FVGG P TT+ LREHF + +++ ++ +S+GY
Sbjct: 51 GAAALIPAPPTYELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGY 109
Query: 73 GFVIMGDRTAAERACKDPNPIIDGRKANVNL 103
GF+ AE K ++ R +NL
Sbjct: 110 GFITFETEDQAEEIRKLTPKQLEFRSRKLNL 140
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.4 bits (105), Expect = 6e-06
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
KLF+G L +++LRE FA +G IE+ V+ D Q KSRG FV +R+ A A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKE 201
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + DT K+FVG +P + R F YG + ++ D+ T S+G FV R
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHR 106
Query: 81 TAAERA 86
A A
Sbjct: 107 KDAIEA 112
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.4 bits (105), Expect = 6e-06
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
KLF+G L +++LRE FA +G IE+ V+ D Q KSRG FV +R+ A A K+
Sbjct: 143 KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSCAVVATKE 201
Score = 40.3 bits (90), Expect = 4e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + DT K+FVG +P + R F YG + ++ D+ T S+G FV R
Sbjct: 47 PSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHR 106
Query: 81 TAAERA 86
A A
Sbjct: 107 KDAIEA 112
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 46.0 bits (104), Expect = 8e-06
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA 86
T L++ GL +T D LRE + YG+I I D+ TN +GYGFV AA A
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 164
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 46.0 bits (104), Expect = 8e-06
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA 86
T L++ GL +T D LRE + YG+I I D+ TN +GYGFV AA A
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAA 138
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 44.8 bits (101), Expect = 2e-05
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 20 LPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGD 79
+P +K T +LFVG LP + L+E F+ +GDI E + +G+ F+ +
Sbjct: 107 VPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
Query: 80 RTAAERACKD-PNPIIDGRKANVNLAILGAKPR 111
R AE A + II GR+ V A+ GA R
Sbjct: 160 RAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIR 192
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 44.8 bits (101), Expect = 2e-05
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 20 LPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGD 79
+P +K T +LFVG LP + L+E F+ +GDI E + +G+ F+ +
Sbjct: 107 VPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
Query: 80 RTAAERACKD-PNPIIDGRKANVNLAILGAKPR 111
R AE A + II GR+ V A+ GA R
Sbjct: 160 RAHAESAKEAIDGRIIHGRQVRVRFAVHGAAIR 192
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
++F G L +D+ L + F Y ++A V+ + +TNKS+GYGFV D RA ++
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 43.6 bits (98), Expect = 4e-05
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 24 KDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAA 83
KD+ W +++GGL Y ++ + F+ YG++ +I D+ T KS+G+ F+ D+ +
Sbjct: 35 KDSAW--IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRST 92
Query: 84 ERACKDPNPI 93
A + N I
Sbjct: 93 ILAVDNFNGI 102
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 42.3 bits (95), Expect = 1e-04
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L V +P+ D L+ F +G + + +I + + +K G+GFV M AERA ++
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSK--GFGFVTMERPQDAERARQE 211
Query: 90 -PNPIIDGRKANVNLA 104
+I+GRK VN A
Sbjct: 212 LHGSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 42.3 bits (95), Expect = 1e-04
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L V +P+ D L+ F +G + + +I + + +K G+GFV M AERA ++
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSK--GFGFVTMERPQDAERARQE 211
Query: 90 -PNPIIDGRKANVNLA 104
+I+GRK VN A
Sbjct: 212 LHGSMIEGRKIEVNCA 227
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.5 bits (93), Expect = 2e-04
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T L + LP T + +R F G+IE ++ D+ T +S GYGFV A RA
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 89 DPNPIIDGRKANVNLAILGAKPRGNLAPDTN 119
N + R N + + A+P + +N
Sbjct: 102 SFNGL---RLQNKTIKVSYARPSNDQIKGSN 129
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/73 (30%), Positives = 33/73 (45%)
Query: 19 ALPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMG 78
A P + L+V G+P T L F +G I + +++D T S+G GFV
Sbjct: 118 ARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFD 177
Query: 79 DRTAAERACKDPN 91
+ A+ A K N
Sbjct: 178 KKDEADVAIKTLN 190
Score = 33.5 bits (73), Expect = 0.045
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAE 84
DT LFV L T D L + F+ +G I ++ D T + +GY FV M + T A
Sbjct: 370 DTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAY 428
Query: 85 RA 86
A
Sbjct: 429 NA 430
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
LF+ LP D L + FA +G I A V DR TN+S+ +GFV + +++ A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 91 NPIIDGRKANVNLAILGAKPRGNLAP 116
N G K L + +PR P
Sbjct: 491 NGFQIGMK---RLKVQLKRPRNESRP 513
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
KLF+G L ++ +R FA +G+++E V+ S+G FV
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.7 bits (91), Expect = 3e-04
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
LF+ LP D L + FA +G I A V DR TN+S+ +GFV + +++ A
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITAM 490
Query: 91 NPIIDGRKANVNLAILGAKPRGNLAP 116
N G K L + +PR P
Sbjct: 491 NGFQIGMK---RLKVQLKRPRNESRP 513
Score = 30.7 bits (66), Expect = 0.31
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
KLF+G L ++ +R FA +G+++E V+ S+G FV
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFV 169
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA-CKD 89
LFV L TTD+ L F+ +G I ++ DR++ S Y F+ + + E+A K
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 90 PNPIIDGRKANVNLA 104
N +ID R+ +V+ +
Sbjct: 303 DNVLIDDRRIHVDFS 317
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA-CKD 89
LFV L TTD+ L F+ +G I ++ DR++ S Y F+ + + E+A K
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 90 PNPIIDGRKANVNLA 104
N +ID R+ +V+ +
Sbjct: 303 DNVLIDDRRIHVDFS 317
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 39.9 bits (89), Expect = 5e-04
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA-CKD 89
LFV L TTD+ L F+ +G I ++ DR++ S Y F+ + + E+A K
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 90 PNPIIDGRKANVNLA 104
N +ID R+ +V+ +
Sbjct: 234 DNVLIDDRRIHVDFS 248
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 39.5 bits (88), Expect = 7e-04
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
+LF+ LPY T + L+ F YG++ E V+ D++T +G+ V
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIV 325
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
T+L V LP T++ LR+ F YG I +A + ++ K RG+ FV D +A A
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALA 61
Query: 89 DPN 91
N
Sbjct: 62 KSN 64
Score = 29.9 bits (64), Expect = 0.55
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEE-AVVITDRQTNKSRGYGFVIMGDRTAAERA 86
TKL V LP+ + K + F +G ++ + Q + RG+GFV A RA
Sbjct: 748 TKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDFISADEAHRA 806
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 39.5 bits (88), Expect = 7e-04
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
++D+ L V G+ + TTD+ +++F G + I + S+G+GFV M
Sbjct: 167 ERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCE-IKRKSDGNSKGFGFVRMSSVGE 225
Query: 83 AERACKDPNPIIDGRKANVNL 103
+ P +IDGR+ +V +
Sbjct: 226 QNKVLAIPQHMIDGRRCDVKV 246
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYG-DIEEAVVITDRQTNKS-RGYGFVIMGDRTAAERA 86
+++FVG L + LR+ F E V+TD K RG+ FV + AAER
Sbjct: 259 SRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Query: 87 CKDPNPIIDGRKANVNLAILGAKPRGNLAPD 117
+ ++G +++A + ++ PD
Sbjct: 319 VSKGSLTVNGLSVGLSIAQPREENNQSVGPD 349
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGLP + T+ ++E +G ++ + D Q N S+GY F D T ++A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEYLDPTLTDQAIAG 350
Query: 90 PNPIIDGRK 98
N + G K
Sbjct: 351 LNGMQLGDK 359
>AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 9e-04
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+VGG T+K L F +GD+ + D ++ K RG+GFV A A +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 91 NPI-IDGRKANVNLA 104
N + G+ VN A
Sbjct: 73 NESELFGKTIRVNFA 87
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGLP + T+ ++E +G ++ + D Q N S+GY F D T ++A
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEYLDPTLTDQAIAG 350
Query: 90 PNPIIDGRK 98
N + G K
Sbjct: 351 LNGMQLGDK 359
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGLP + T+ ++E +G ++ + D Q N S+GY F D T ++A
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEYLDPTLTDQAIAG 325
Query: 90 PNPIIDGRK 98
N + G K
Sbjct: 326 LNGMQLGDK 334
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 39.1 bits (87), Expect = 9e-04
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K+F+GGLP + T+ ++E +G ++ + D Q N S+GY F D T ++A
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGN-SKGYAFAEYLDPTLTDQAIAG 328
Query: 90 PNPIIDGRK 98
N + G K
Sbjct: 329 LNGMQLGDK 337
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 38.7 bits (86), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 31 LFVGGLPYHTTDKSLREHF-AVYGDIEEAVVITDRQTNKSRGYGFV 75
+FVG LP+ T+ +L F A G +E ++ D+ T K +G+ FV
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFV 293
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L V +P+ + L F G + + +I + + +K G+GFV M + A+RA +
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADRARAE 158
Query: 90 PN-PIIDGRKANVNLA 104
N I+GR+ VNLA
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 38.7 bits (86), Expect = 0.001
Identities = 16/64 (25%), Positives = 33/64 (51%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
QK +F+G + +++T + + EHF G I + + D+ T K + + ++ D ++
Sbjct: 49 QKAIDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSS 108
Query: 83 AERA 86
E A
Sbjct: 109 IENA 112
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 38.7 bits (86), Expect = 0.001
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L V +P+ + L F G + + +I + + +K G+GFV M + A+RA +
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADRARAE 158
Query: 90 PN-PIIDGRKANVNLA 104
N I+GR+ VNLA
Sbjct: 159 FNGTTIEGRRVEVNLA 174
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK-- 88
+F+ L Y T ++ ++E + +G I+ A++ + + S+G FV A +
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 89 DPNPIIDGRKANVNLAI 105
+ IID R NLAI
Sbjct: 325 EDGVIIDNRLVKANLAI 341
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V L D L++ F YG+I A V+TD + +S+G+GFV A A +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 91 N 91
N
Sbjct: 378 N 378
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 21 PGQKDT----TWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVI 76
PGQ T T L+VG L + L E F+ G + V D T S GY +V
Sbjct: 20 PGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVN 79
Query: 77 MGDRTAAERACKDPN 91
AERA N
Sbjct: 80 FQQPADAERAMDTMN 94
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + + +F+ L +KS+ + F+++G+I V D + S+GYGFV
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETE 170
Query: 81 TAAERACKDPN-PIIDGRKANV 101
AA+ A + N ++ G+K V
Sbjct: 171 EAAQNAIQKVNGMLLAGKKVFV 192
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T ++V H ++L + FA +G+I V+T KS+G+GFV +
Sbjct: 206 GETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE--GKSKGFGFVAFANPE 263
Query: 82 AAERA 86
AE A
Sbjct: 264 EAETA 268
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
QK +F+G + +++T + + EHF G I + D+ T K + + ++ D ++
Sbjct: 55 QKAIDAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSS 114
Query: 83 AERA 86
E A
Sbjct: 115 IENA 118
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V L D L++ F YG+I A V+TD + +S+G+GFV A A +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 91 N 91
N
Sbjct: 318 N 318
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 21 PGQKDT----TWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVI 76
PGQ T T L+VG L + L E F+ G + V D T S GY +V
Sbjct: 20 PGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVN 79
Query: 77 MGDRTAAERACKDPN 91
AERA N
Sbjct: 80 FQQPADAERAMDTMN 94
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T ++V H ++L + FA +G+I V+T KS+G+GFV +
Sbjct: 146 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPE 203
Query: 82 AAERA 86
AE A
Sbjct: 204 EAETA 208
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V L D L++ F YG+I A V+TD + +S+G+GFV A A +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 91 N 91
N
Sbjct: 315 N 315
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + + +F+ L +KS+ + F+++G+I V D + S+GYGFV
Sbjct: 49 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETE 107
Query: 81 TAAERACKDPN-PIIDGRKANV 101
AA+ A + N ++ G+K V
Sbjct: 108 EAAQNAIQKVNGMLLAGKKVFV 129
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T ++V H ++L + FA +G+I V+T KS+G+GFV +
Sbjct: 143 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPE 200
Query: 82 AAERA 86
AE A
Sbjct: 201 EAETA 205
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 37.5 bits (83), Expect = 0.003
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
L+V L D L++ F YG+I A V+TD + +S+G+GFV A A +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 91 N 91
N
Sbjct: 378 N 378
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 4/75 (5%)
Query: 21 PGQKDT----TWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVI 76
PGQ T T L+VG L + L E F+ G + V D T S GY +V
Sbjct: 20 PGQNQTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVN 79
Query: 77 MGDRTAAERACKDPN 91
AERA N
Sbjct: 80 FQQPADAERAMDTMN 94
Score = 34.7 bits (76), Expect = 0.019
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 21 PGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
P + + +F+ L +KS+ + F+++G+I V D + S+GYGFV
Sbjct: 112 PAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFETE 170
Query: 81 TAAERACKDPN-PIIDGRKANV 101
AA+ A + N ++ G+K V
Sbjct: 171 EAAQNAIQKVNGMLLAGKKVFV 192
Score = 34.7 bits (76), Expect = 0.019
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 22 GQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRT 81
G+ +T ++V H ++L + FA +G+I V+T KS+G+GFV +
Sbjct: 206 GETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGFGFVAFANPE 263
Query: 82 AAERA 86
AE A
Sbjct: 264 EAETA 268
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 37.1 bits (82), Expect = 0.004
Identities = 15/72 (20%), Positives = 35/72 (48%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VG + Y T + + +HF G + + DR + +G+ +V ++ + A
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 91 NPIIDGRKANVN 102
+ ++ GR+ V+
Sbjct: 140 DSLLRGRQIKVD 151
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 36.7 bits (81), Expect = 0.005
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 25 DTTWTKLFVGGL----PYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDR 80
DTT T L++G L T+K L + F YGDI V+T+ +G F+ R
Sbjct: 231 DTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE------KGCAFIEFTTR 284
Query: 81 TAAERACKDP--NPIIDGRKANVNLAILGAKPRGNLAPDTND 120
AAERA + I G++ L I +P+ A D ++
Sbjct: 285 EAAERAAERSFNKTFIKGKR----LTIRWGEPQAKRAADNSN 322
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.006
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK- 88
+++VG +P + +L F G I + ++ D + SRGY FV ++ A A K
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 89 -DPNPIIDGRKANVNLAILGAK 109
D + I G+ VN++I +
Sbjct: 261 YDGHEISTGKPLKVNVSIANTR 282
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 36.3 bits (80), Expect = 0.006
Identities = 20/81 (24%), Positives = 35/81 (43%)
Query: 23 QKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTA 82
Q+ T ++VG + + +T + EHFAV G + + D+ T + + FV +
Sbjct: 40 QEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLES 99
Query: 83 AERACKDPNPIIDGRKANVNL 103
+ A + RK V L
Sbjct: 100 VQLALVLSGTMFRNRKIMVTL 120
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L++G +PY+ ++ + YG I + G+ FV D AE AC D
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKI--------NNISMKYGFAFVDFEDSRDAEDACHD 54
Query: 90 -PNPIIDGRKANVNLAILGAKPRGN 113
++G + + + KPRGN
Sbjct: 55 LDGKTMEGSSMRLVVEMARGKPRGN 79
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L++G +PY+ ++ + YG I + G+ FV D AE AC D
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKI--------NNISMKYGFAFVDFEDSRDAEDACHD 54
Query: 90 -PNPIIDGRKANVNLAILGAKPRGN 113
++G + + + KPRGN
Sbjct: 55 LDGKTMEGSSMRLVVEMARGKPRGN 79
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.015
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 9/85 (10%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
+L++G +PY+ ++ + YG I + G+ FV D AE AC D
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKI--------NNISMKYGFAFVDFEDSRDAEDACHD 54
Query: 90 -PNPIIDGRKANVNLAILGAKPRGN 113
++G + + + KPRGN
Sbjct: 55 LDGKTMEGSSMRLVVEMARGKPRGN 79
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 34.7 bits (76), Expect = 0.019
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 41 TDKSLREH-FAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPNPIIDGRKA 99
T KS EH F YG I+ + D T RG+ + + A +A + +IDG +
Sbjct: 36 TGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRV 95
Query: 100 NV 101
+V
Sbjct: 96 DV 97
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 34.3 bits (75), Expect = 0.026
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD- 89
L+VG L Y+T + + E F GD+ ++ DR G+ FV R AE A ++
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 90 PNPIIDGR 97
N +D R
Sbjct: 99 SNTRMDDR 106
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.034
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 20 LPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEE 57
+P +K T +LFVG LP + L+E F+ +GDI E
Sbjct: 107 VPKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.034
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K++VG LP +K + + F YG I+ D ++ + + FV D AE A +
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 90 PNPI-IDGRKANVNLAILGAKPRG 112
+ DGR+ V G PRG
Sbjct: 66 RDGYEFDGRRIRVEFT-RGVGPRG 88
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.9 bits (74), Expect = 0.034
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K++VG LP +K + + F YG I+ D ++ + + FV D AE A +
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIK----YVDIKSGRGPAFAFVEFEDHRDAEDAVRA 65
Query: 90 PNPI-IDGRKANVNLAILGAKPRG 112
+ DGR+ V G PRG
Sbjct: 66 RDGYEFDGRRIRVEFT-RGVGPRG 88
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.1 bits (72), Expect = 0.059
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
++++G L ++K + F YG I + ++ G+GFV D+ AE A D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 90 PNPIIDGRKANVNLAILG-AKPRG 112
++G++ IL +KPRG
Sbjct: 56 ----LNGKELGGERVILDYSKPRG 75
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.1 bits (72), Expect = 0.059
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
++++G L ++K + F YG I + ++ G+GFV D+ AE A D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 90 PNPIIDGRKANVNLAILG-AKPRG 112
++G++ IL +KPRG
Sbjct: 56 ----LNGKELGGERVILDYSKPRG 75
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.059
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
++++G L ++K + F YG I + ++ G+GFV D+ AE A D
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 90 PNPIIDGRKANVNLAILG-AKPRG 112
++G++ IL +KPRG
Sbjct: 56 ----LNGKELGGERVILDYSKPRG 75
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 33 VGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPNP 92
V LP + LR+ F G + + D+ T +G+ FV R A RA + N
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELND 239
Query: 93 I 93
I
Sbjct: 240 I 240
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.078
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 27 TWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA 86
T +++V +P+ ++ L F YG + ++T+ S+G+GFV + + E+A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKA 106
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 32.7 bits (71), Expect = 0.078
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
L++ LPY T + + E F +G + + V T ++RG FV+ D A+ AC+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVYEDIFDAKTACE 75
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 32.7 bits (71), Expect = 0.078
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 27 TWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERA 86
T +++V +P+ ++ L F YG + ++T+ S+G+GFV + + E+A
Sbjct: 49 TDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN--DRGSKGFGFVTLDSIESCEKA 106
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAE 84
D LFVG +P ++ +R F +G +EE + T T+ + + D+
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 85 RACKDPNPIIDG 96
+A + PI G
Sbjct: 225 KAEEQDRPIRAG 236
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAE 84
D LFVG +P ++ +R F +G +EE + T T+ + + D+
Sbjct: 165 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 224
Query: 85 RACKDPNPIIDG 96
+A + PI G
Sbjct: 225 KAEEQDRPIRAG 236
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 25 DTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAE 84
D LFVG +P ++ +R F +G +EE + T T+ + + D+
Sbjct: 142 DEATRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQA 201
Query: 85 RACKDPNPIIDG 96
+A + PI G
Sbjct: 202 KAEEQDRPIRAG 213
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VGGL ++ L E G + + DR T +G+GFV A+ A K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 91 NPI-IDGRKANVNLA 104
N I + G+ VN A
Sbjct: 75 NMIKLYGKPIKVNKA 89
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 69 SRGYGFVIMGDRTAAERACKDPN-PIIDGRKANVNLA 104
S+G+GFV M + A+RA + N I+GR+ VNLA
Sbjct: 20 SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.5 bits (68), Expect = 0.18
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 31 LFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDP 90
++VGGL ++ L E G + + DR T +G+GFV A+ A K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 91 NPI-IDGRKANVNLA 104
N I + G+ VN A
Sbjct: 85 NMIKLYGKPIKVNKA 99
>Z66521-9|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 0.24
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
++++G LP +D+ + F YG + + ++ G+GFV D+ A+ A D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHD 54
Query: 90 PN 91
N
Sbjct: 55 LN 56
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 31.1 bits (67), Expect = 0.24
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 36 LPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKDPN 91
+P+ +K L +F +G++ V +R+T +G+ +V ++ AE A + N
Sbjct: 39 IPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMN 94
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 31.1 bits (67), Expect = 0.24
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 18 GALPGQKDTTWT---KLFVGGLPYHTTDKSLREHFAVYG 53
G LP + T+ T K+FVGG+P+ T+ +L++ F +G
Sbjct: 281 GELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 30.7 bits (66), Expect = 0.31
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K++VGGLP T + L E F +G I + V + G+ FV D AE A +
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 90 -PNPIIDGRKANVNLA 104
I G +A V L+
Sbjct: 59 LDGSRICGVRARVELS 74
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 30.7 bits (66), Expect = 0.31
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K++VGGLP T + L E F +G I + V + G+ FV D AE A +
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 90 -PNPIIDGRKANVNLA 104
I G +A V L+
Sbjct: 59 LDGSRICGVRARVELS 74
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 30.7 bits (66), Expect = 0.31
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 30 KLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACKD 89
K++VGGLP T + L E F +G I + V + G+ FV D AE A +
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVRA 58
Query: 90 -PNPIIDGRKANVNLA 104
I G +A V L+
Sbjct: 59 LDGSRICGVRARVELS 74
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 40 TTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGD 79
T + L E F+ G + + +ITD +T +S+G +V D
Sbjct: 36 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 75
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 40 TTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGD 79
T + L E F+ G + + +ITD +T +S+G +V D
Sbjct: 181 TRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD 220
>Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 30.3 bits (65), Expect = 0.42
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Query: 16 ALGALPGQKDTTWTKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFV 75
A P + W +FV + T+ + + F+ YG I+ + DR+T +GY V
Sbjct: 43 ATSGAPQRSVEGWI-VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALV 101
Query: 76 IMGDRTAAERACKDPN 91
+ A A N
Sbjct: 102 EYETQKEANEAIDQSN 117
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAER 85
+K+FV + + TD L+ F+ +G + +T + K +G FV +A++
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKD-GKPKGIAFVDFDTEASAQK 738
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 27.5 bits (58), Expect = 2.9
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 70 RGYGFVIMGDRTAAERACKDPNPII-DGRKANVNLAILGA--KPRGN 113
+G+GFV + +A+ +C+ N + +V+LA+LG+ KP GN
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNGMSWKACCLDVHLAMLGSLRKPTGN 165
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 27.1 bits (57), Expect = 3.9
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 29 TKLFVGGLPYHTTDKSLREHFAVYGDIEEAVVITDRQTNKSRGYGFVIMGDRTAAERACK 88
+ +FV G+ D L + +G I + VV Q + + GYGFV+ R A++
Sbjct: 96 SNVFVRGISRDMPDTEL---YQAFGGITDGVV----QCHVADGYGFVLFDTRANAQKKIV 148
Query: 89 DPNPIIDGRKANVNL-AILGAKP 110
+ +DG+ N L ++ A+P
Sbjct: 149 E----MDGKTLNGKLISVSWARP 167
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 79 DRTAAERACKDPNPIIDGRKANVNLAILGAKPRGNLAPDTND 120
D R + P P++ AN +LA + PR + P+ D
Sbjct: 303 DHHTVPRYVEPPKPVVYSLSANKSLARSASVPRSSAPPEQRD 344
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 79 DRTAAERACKDPNPIIDGRKANVNLAILGAKPRGNLAPDTND 120
D R + P P++ AN +LA + PR + P+ D
Sbjct: 422 DHHTVPRYVEPPKPVVYSLSANKSLARSASVPRSSAPPEQRD 463
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.135 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,089,942
Number of Sequences: 27539
Number of extensions: 115217
Number of successful extensions: 319
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 183
Number of HSP's gapped (non-prelim): 151
length of query: 124
length of database: 12,573,161
effective HSP length: 73
effective length of query: 51
effective length of database: 10,562,814
effective search space: 538703514
effective search space used: 538703514
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 54 (25.8 bits)
- SilkBase 1999-2023 -