Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002683-TA|BGIBMGA002683-PA|IPR008279|PEP-utilising
enzyme, mobile region
(320 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0169 - 17959262-17959304,17959441-17959532,17959682-179597... 37 0.025
05_04_0268 - 19574540-19574582,19574664-19574755,19574843-195749... 36 0.043
06_01_1126 - 9277885-9277935,9278129-9278209,9278297-9278350,927... 31 0.93
06_03_0637 - 22995831-22996667,22997200-22997694 30 2.2
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917... 29 3.8
02_05_1336 + 35773629-35773856,35773931-35774085,35774217-357745... 29 3.8
02_01_0135 + 967172-967229,968316-968657,968936-969015,969063-96... 29 3.8
12_02_0521 - 19955475-19956076,19957146-19958403 28 8.7
>03_04_0169 -
17959262-17959304,17959441-17959532,17959682-17959759,
17959938-17960075,17960174-17960302,17960556-17960685,
17960797-17960974,17961177-17961315,17961399-17961488,
17961633-17961794,17961966-17962130,17962250-17962387,
17962827-17963006,17963405-17963533,17963878-17964113,
17964233-17964395,17965260-17965628,17965724-17965828
Length = 887
Score = 36.7 bits (81), Expect = 0.025
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Query: 248 GIVTELGGLISHGAVIAREYGLPCIVGAT-----DATEIFRTGDLVRLSG----TNGVLE 298
GI+T GG+ SH AV+AR +G C+ G + DA ++ D V G NG
Sbjct: 458 GILTARGGMTSHAAVVARGWGKCCVAGCSGIRVNDAEKVVLVADKVLCEGEWLSLNGSTG 517
Query: 299 KVVVENKP 306
+V++ P
Sbjct: 518 EVILGKLP 525
>05_04_0268 -
19574540-19574582,19574664-19574755,19574843-19574920,
19575095-19575232,19575478-19575606,19575889-19576018,
19576171-19576348,19576715-19576853,19577031-19577120,
19577260-19577421,19577556-19577720,19577909-19578046,
19578657-19578836,19579129-19579257,19579442-19579677,
19579795-19579957,19580030-19580070,19580162-19580489,
19581416-19581553,19581670-19581873
Length = 966
Score = 35.9 bits (79), Expect = 0.043
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 206 GEVVARACVVKELSEVDQLQQGDVLI----THATDIGWSPYFPLLTGIVTELGGLISHGA 261
G V + E +E Q DV++ T D+G GI+T GG+ SH A
Sbjct: 494 GAAVGQIVFTAEDAEAWHAQGKDVILVRTETSPEDVGG---MHAAVGILTARGGMTSHAA 550
Query: 262 VIAREYGLPCIVGAT-----DATEIFRTGDLVRLSG----TNGVLEKVVVENKP 306
V+AR +G C+ G + DA++I D G NG +V++ +P
Sbjct: 551 VVARGWGKCCVSGCSSVRVNDASKIVVIEDKALHEGEWLSLNGSTGEVIIGKQP 604
>06_01_1126 -
9277885-9277935,9278129-9278209,9278297-9278350,
9278433-9278564,9278641-9278715,9279056-9279133,
9279215-9279327,9279421-9279535,9280565-9280754,
9281355-9281464,9281559-9281654,9281756-9281818,
9281911-9281988,9282452-9282564,9282664-9282721,
9282797-9282920,9282999-9283060,9283131-9283195,
9283264-9283324,9284242-9284307,9284472-9284531,
9284830-9284960,9285517-9285592,9285701-9285769,
9286065-9286112,9286552-9286671,9286918-9287034,
9287290-9287405,9288348-9288519,9289057-9289100,
9290359-9290712,9291680-9291806
Length = 1072
Score = 31.5 bits (68), Expect = 0.93
Identities = 17/53 (32%), Positives = 25/53 (47%)
Query: 53 PEEMMKILQNLRSSPEEPQQSKTTDEVIASLTTPKKNSTRRAVRHREGTKAHL 105
P E++ +L L +S +P S D +A +TT +RR REG L
Sbjct: 50 PIELLALLYGLLASQSQPVPSACCDAALAYVTTAAAALSRRRCGRREGVSGGL 102
>06_03_0637 - 22995831-22996667,22997200-22997694
Length = 443
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 164 YYPKWCKLKFNELNNGWIAPLEAKGPSVR----AGDVRIEATSVCGGEVVARACVVKE 217
Y W KL FN+++ G+ AP A GP V + + + A + G + +CV KE
Sbjct: 373 YVSDWSKLGFNDVDYGYGAP-SAAGPLVNCDLISSVIVMRAPAPLAGTRLLASCVTKE 429
>03_02_0955 -
12690405-12690842,12690940-12691130,12691208-12691718,
12692240-12693171,12693260-12693351,12693430-12693509,
12693568-12693621,12693734-12693850,12693949-12694194,
12694273-12694432,12694512-12694576,12694686-12694877,
12694980-12695061,12695153-12695925
Length = 1310
Score = 29.5 bits (63), Expect = 3.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 281 IFRTGDLVRLSGTNGVLEKVVVENK 305
+F+ D VR++ TN ++E ++ ENK
Sbjct: 435 MFKREDAVRIAATNAIVELIIAENK 459
>02_05_1336 +
35773629-35773856,35773931-35774085,35774217-35774549,
35774615-35774927,35776992-35777168,35777281-35777397,
35777532-35777698,35777800-35778024,35778127-35778448,
35778542-35778786,35778993-35779131,35779212-35779304,
35779509-35779577
Length = 860
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 39 IMEFDLYTKPWILVPEEMMKILQNLRSSPEEPQQSKTTDEVIASLTTPKKNSTRRAVRHR 98
+ FD+Y + +KIL+ L P+ + T ++ASL T K T+ + H
Sbjct: 388 VSRFDIYPYLERYAQDSSVKILEILEGKPDLVIGNYTDGNLVASLLTSKLGVTQGTIAHA 447
Query: 99 -EGTK 102
E TK
Sbjct: 448 LEKTK 452
>02_01_0135 +
967172-967229,968316-968657,968936-969015,969063-969698,
969819-971527,971563-972514,972821-973273,974303-974497
Length = 1474
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 55 EMMKILQNLRSSPEEPQQSKTTDEVIASLTTPKKNSTRRAVRHREGTKAHLILAAHKMRL 114
E + +L N S EP KT D+VI L P +N + G + LA+ L
Sbjct: 770 EELSLLWNDNSMNPEPTAEKTRDDVIEGL-EPLQNLKHLQLIRYSGATSPTWLASRVTSL 828
Query: 115 ALLRLGDMLVRQWYL 129
+L L + RQW +
Sbjct: 829 QVLHLEN--CRQWQI 841
>12_02_0521 - 19955475-19956076,19957146-19958403
Length = 619
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 53 PEEMMKILQNLRSSPEEPQQSKTTDEVIASLTTPKKNSTRRAVRHREGTKAHLILAAHKM 112
P ++++LQ L E T +E I L TP++ R A E K ++A KM
Sbjct: 411 PRMILQVLQEL----ELDSPKSTENEEIGRLITPQEACNRIAEVVHEAVKKMELVAEEKM 466
Query: 113 RL 114
RL
Sbjct: 467 RL 468
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.138 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,572,781
Number of Sequences: 37544
Number of extensions: 391785
Number of successful extensions: 876
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 871
Number of HSP's gapped (non-prelim): 8
length of query: 320
length of database: 14,793,348
effective HSP length: 82
effective length of query: 238
effective length of database: 11,714,740
effective search space: 2788108120
effective search space used: 2788108120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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