Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002682-TA|BGIBMGA002682-PA|IPR002192|Pyruvate phosphate
dikinase, PEP/pyruvate-binding
(882 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical pr... 127 4e-29
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 34 0.50
Z81063-5|CAB02955.1| 209|Caenorhabditis elegans Hypothetical pr... 31 3.6
AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily a... 31 4.7
U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein ... 30 6.2
Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical pr... 30 8.2
Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical pr... 30 8.2
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 30 8.2
AF024503-1|AAG24089.2| 527|Caenorhabditis elegans Hypothetical ... 30 8.2
>Z73098-7|CAA97341.1| 1215|Caenorhabditis elegans Hypothetical
protein T21C9.6 protein.
Length = 1215
Score = 127 bits (306), Expect = 4e-29
Identities = 110/354 (31%), Positives = 167/354 (47%), Gaps = 33/354 (9%)
Query: 357 LSFEERAATCTDYVGGKGASLALLASVQNDEGYRVPPGFCITTKALEKHLQLHTELKAAI 416
+SF RA GGKGA+LA L ++ +D + VPPG +TT A KH+ + + I
Sbjct: 358 VSFNHRACQDKMLTGGKGANLARLQAITDD--FHVPPGIVVTTAAFNKHVIANPNVLEEI 415
Query: 417 QDIXXXXXXXXXXXFKERCQKVSSLFLALELSADIKKDILEYMQELRSKSAQLKDAQELR 476
+ + +++ +++ L E+S +++K+I E++ RS+
Sbjct: 416 KLLDINDKNAEY--YEDVGKRIEGLLFESEVSQELQKEIKEWLP--RSEY---------- 461
Query: 477 FAVRSSAVGEDSEALSAAGQNETILGCVTDDDVIRAVQKCWGSMFEFTSTYYRRQNXXXX 536
+AVRSSAVGED LS+AGQ E+ L V + D++ ++ CWGS F YR+
Sbjct: 462 YAVRSSAVGEDGADLSSAGQLESYLD-VIEIDIVDKLKLCWGSNFRREVLNYRKNYGQQL 520
Query: 537 XXXXXXXXXXXXSPRVAGVMFTRHPDAGDPSRLLITANYGLGESVVSGTVEPDTIIVKRE 596
VAGVMFT +P D ++I A G GE +VSG PD I V R
Sbjct: 521 NPSMAVVIQEMDRNGVAGVMFTANPVKLDRGEIVINALKGSGEQIVSGVTTPDEIYVNRI 580
Query: 597 PNGVLTIQKRELGSKTRRHVASSSGGVITEDVPEKERSVACLNDTE-VLKLARLGVVQEE 655
V+ I K + + +T+ ER D E V++ + +VQ
Sbjct: 581 HKTVV-INKVGVDCCLDDYQIEK----LTKVGEYLERIFGKPQDIEFVVRNQMVNIVQ-- 633
Query: 656 LWGAGRDIEWAISGVKRWTEEELLHEVDSPIMADNELTTFGNTGEVLPKPVTPL 709
RD I+G+ + T+ E+ E +SP + D E+ T N GEVLP PV +
Sbjct: 634 ----SRD----ITGLDKETQFEMCTEYNSPSIHDKEILTNANVGEVLPVPVNAM 679
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 33.9 bits (74), Expect = 0.50
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 446 ELSADIKKDILEYMQELRSKSAQLKDAQELRFAVRSSAVGEDSEALSAAGQNETIL 501
+L+ + ++IL+ + +R A +KD + RF + SA G+ S L+ +GQ + +L
Sbjct: 170 QLAVESDEEILDKL--IRESEAPIKDRPKKRFNYKKSANGDHSSVLNPSGQYKNVL 223
>Z81063-5|CAB02955.1| 209|Caenorhabditis elegans Hypothetical
protein F15D3.6 protein.
Length = 209
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 663 IEWAISGVKRWTEEELLHEVDSPI--MADNELTTFGNTGEVLPKPVTP 708
+EW I +K+ E + +V S + M++ L +FG T PKP TP
Sbjct: 158 VEWVIDHLKK-EYEAISTKVSSEVHEMSEKVLRSFGTTSSSSPKPSTP 204
>AC006731-1|AAF60483.1| 4900|Caenorhabditis elegans Temporarily
assigned gene nameprotein 80 protein.
Length = 4900
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 671 KRWTEEELLHEVDSPIMADNELTTFGNTGEVLPKPVTPLTYDLVIRPLIWSM----DRAI 726
+R ++++ +E SP++ ++F V +P P+ V P++ S DR+
Sbjct: 2607 ERSFDQDVTYERSSPLLIPTPSSSFEQASTVPDRPPLPVRLPTVDEPIVSSEQHEDDRSS 2666
Query: 727 ITNGSQYDHS 736
T+G+ Y+ S
Sbjct: 2667 ATSGADYERS 2676
>U23147-7|AAC46691.1| 596|Caenorhabditis elegans Rapsyn protein 1
protein.
Length = 596
Score = 30.3 bits (65), Expect = 6.2
Identities = 33/151 (21%), Positives = 61/151 (40%), Gaps = 7/151 (4%)
Query: 142 WRDSQWSSMLGKWEEGSWLQWGTVQGRFQS--FTAEGALDTTEY--LQTRGVKERHWAPH 197
+ ++ + KW + S + + RF + + A+ D EY + + + + A
Sbjct: 17 YHQRHYAQAINKWRQ-SLNRLNNAEDRFITLGYLAQALCDQGEYEGMLSYALSQMQLATD 75
Query: 198 AYEGTRR--SFSITASARDGTAVVLRGVSYKKVLTQCLSGCVRLPDYRVLTITDTDLIMS 255
+ + +F A A + A + + Y K + S R P Y LTI L MS
Sbjct: 76 QNDSAMKCEAFLNLAKAYERLADFTKALQYGKASLEHPSMDPRTPGYAHLTIALAHLGMS 135
Query: 256 DFCETPGGIPSAYTINIHTKERSLKVVLRIG 286
F + SA + T +R L++ + +G
Sbjct: 136 QFQQCLESFESAMNVANETSDRLLELQICVG 166
>Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical
protein F58H1.3a protein.
Length = 492
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 458 YMQELRSKSAQLKDAQ-ELRFAVRSSAVGEDSEALSAAGQNETILGCVTDDDVIRAVQKC 516
++ ++ +++A K A + + VR G EA++A G ET L + R + +C
Sbjct: 201 FLTDVEAEAAAAKKAGLQTKLVVRPGNAGLTQEAINAYGTIETFLNIQNSEFEFRMIIRC 260
Query: 517 WGSMFEFTSTYYR 529
+ ++ + + YR
Sbjct: 261 FQNLNQSSLHLYR 273
>Z66567-3|CAA91489.1| 444|Caenorhabditis elegans Hypothetical
protein ZK455.3 protein.
Length = 444
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 684 SPIMADNELTTFGNTGEVLPKPVTPLTYDLVIRPLIWSMDR 724
+P MA TF G VLP ++ + Y L++R L W M R
Sbjct: 207 TPTMARTYFMTFNVFGYVLPLGISVVLYGLMLRKL-WDMPR 246
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 808 LTSKWKLNDTVKKAKDLEVGTNAKEPIELLESI-AECEDLIGELTYNHSVTTVASTSSQI 866
L K K + + LE G A+ E+ E ++C++ + NH + SS I
Sbjct: 88 LEKKHKYGTSSSNSSQLETGELARVKEEMAELYRSKCQNDQRLIDANHRIADFEKKSSAI 147
Query: 867 IAMTILMEGSAGNI 880
IA I +E +A +I
Sbjct: 148 IAEKIALEATAKSI 161
>AF024503-1|AAG24089.2| 527|Caenorhabditis elegans Hypothetical
protein F31F4.7 protein.
Length = 527
Score = 29.9 bits (64), Expect = 8.2
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 677 ELLHEVDSPIMADNELTTFGNTGEVLPKPVTPLTYDLVIRPLIWSMDRAIITNGSQYDHS 736
EL+ E SP T FGN + + L+Y L + LI S + + + S+ D
Sbjct: 181 ELIGEPVSPSYLSGYFTNFGNIMNFQERVINTLSYYLA-QILISSPNWKTLQDPSK-DLL 238
Query: 737 LTLSHYRCAISLYNS-VYRRVPKK-LDTNIRMMEMAINGHKIADENIHKT--ALIRRKPH 792
+ +YR NS Y P+ L I + + ++ + E + +T +++R+PH
Sbjct: 239 VESEYYRAPYVFINSNPYIDFPRPLLSKTIEIGGITVDADALKSEKVDETWNNILKRRPH 298
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.318 0.134 0.399
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,694,442
Number of Sequences: 27539
Number of extensions: 866557
Number of successful extensions: 1783
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1775
Number of HSP's gapped (non-prelim): 11
length of query: 882
length of database: 12,573,161
effective HSP length: 88
effective length of query: 794
effective length of database: 10,149,729
effective search space: 8058884826
effective search space used: 8058884826
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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