Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002681-TA|BGIBMGA002681-PA|IPR008429|Cleft lip and
palate transmembrane 1
(429 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical pr... 386 e-107
Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical pr... 266 3e-71
AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical ... 265 4e-71
U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine rece... 31 1.2
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 30 2.7
L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z93389-7|CAB07669.2| 300|Caenorhabditis elegans Hypothetical pr... 29 8.4
AF039053-18|AAC25881.2| 495|Caenorhabditis elegans Cytochrome p... 29 8.4
>Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical
protein T13H5.8 protein.
Length = 566
Score = 386 bits (949), Expect = e-107
Identities = 182/334 (54%), Positives = 236/334 (70%), Gaps = 7/334 (2%)
Query: 96 FLPIIQHNVLKSRMSHLLLLNNSMTKVNVTVNVSPASYGIFRLALHVSLAFEHLHSLGFS 155
+LPI+ + + R HL L + VN+T+N P S L + + L GF
Sbjct: 214 YLPIMFVDEMSMRSKHLYELADFQKSVNLTINYEPTSVAKLLLLTSTARSTHQLMKHGFK 273
Query: 156 EKDVDDVKGIFADTNLYLLSATVLIASFHLLFDFLAFKNDVSFWRRKRSLAGLSARTVLW 215
+KDVD+++G+F +T++ LL T +++ HLLFD LAFKND+SFW+ ++S+ GLS +T+LW
Sbjct: 274 DKDVDELRGLFTETSIVLLMVTFFVSTLHLLFDALAFKNDISFWKGRKSMVGLSTKTLLW 333
Query: 216 RAFSQFVIFMYLMDERTSLLVLIPAGISALIELWKVTKVLHLRVSFKAWKLRVWRDTSSD 275
R FSQ +IF YL D++TSLLVLIPAGI+ +IE WKVT + +++K K
Sbjct: 334 RCFSQTIIFFYLFDQQTSLLVLIPAGIATVIEYWKVTIAYKVTITWKGIKFG-----KHS 388
Query: 276 ANEKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLF 335
E T D++AM+YLS+LL PL + GAIYSL+Y PHKSW SW L + NGVYAFGFLF
Sbjct: 389 TEEDETDSIDSQAMKYLSILLVPLVIGGAIYSLLYVPHKSWRSWILETSANGVYAFGFLF 448
Query: 336 MLPQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMACFRDDLVFLVYL 395
MLPQLFVNY+L+SVA LPWRAFMYKAFNTFIDD+FAF+ITMPTAHRMACFRDD+VFLVYL
Sbjct: 449 MLPQLFVNYKLKSVAHLPWRAFMYKAFNTFIDDLFAFVITMPTAHRMACFRDDIVFLVYL 508
Query: 396 YQRWLYPVDKTRVDTGASMDASSEEVETPKKKTE 429
YQRWLYPVD TR++ + E+ + K+K E
Sbjct: 509 YQRWLYPVDYTRINEFG--EGGDEKEKKNKEKLE 540
>Z50795-2|CAA90663.1| 618|Caenorhabditis elegans Hypothetical
protein R166.2 protein.
Length = 618
Score = 266 bits (651), Expect = 3e-71
Identities = 129/333 (38%), Positives = 198/333 (59%), Gaps = 10/333 (3%)
Query: 93 GDKFLPIIQHNVLKSRMSHLLLLNNSMTKVNVTVNVSPASYGIFRLALHVSLAFEHLHSL 152
G + PI+ +N + + +N ++ +N+T+ P S +++ + + L
Sbjct: 246 GTIYKPILFYNNWWNLGADYQPINETVKDLNLTITYYPMSVFKYQMYASQRMQSQWQSML 305
Query: 153 GFSEKDVDD-----VKGIFADTNLYLLSATVLIASFHLLFDFLAFKNDVSFWRRKRSLAG 207
D+DD +K +TN LL+ T++++ H +F+FLAFKND+ FW ++ L G
Sbjct: 306 SMDGADMDDDGHDSMKQALLETNPILLAVTMIVSLLHTVFEFLAFKNDIQFWNNRKDLVG 365
Query: 208 LSARTVLWRAFSQFVIFMYLMDERTSLLVLIPAGISALIELWKVTKVLHLRVSFK-AWKL 266
LS R+VL+ F ++F+Y+ D T+ +V + GI LIE WK+ KV+++ + ++ W
Sbjct: 366 LSVRSVLFNIFQSLIVFLYICDNETNTMVKVTVGIGLLIECWKIPKVMNVSIDWQNKWFG 425
Query: 267 RVWRDTSSDAN---EKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHS 323
+ R SD E T D A +YL L+PL V AIYS++Y K WYSW L+
Sbjct: 426 VIPRLVISDKGSYVESETKIYDQMAFKYLGWALFPLLVGYAIYSVIYVEQKGWYSWVLNM 485
Query: 324 IVNGVYAFGFLFMLPQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMA 383
+ + FGF+ M PQLF+NY+L+SVA LPWR YK NTFIDD+FAF+I MP +R+
Sbjct: 486 LYGFLLTFGFITMTPQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIRMPLLYRIG 545
Query: 384 CFRDDLVFLVYLYQRWLYPVDKTRV-DTGASMD 415
CFRDD++FL+YLYQRW Y +D TR+ + G S++
Sbjct: 546 CFRDDIIFLIYLYQRWAYRIDPTRLNEFGTSLE 578
>AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical
protein C36B7.6 protein.
Length = 602
Score = 265 bits (650), Expect = 4e-71
Identities = 131/341 (38%), Positives = 198/341 (58%), Gaps = 4/341 (1%)
Query: 93 GDKFLPIIQHNVLKSRMSHLLLLNNSMTKVNVTVNVSPASYGIFRLALHVSLAFEHLHSL 152
G+ + PI+ N + + + +N ++ ++ ++V P S +++ ++ + L
Sbjct: 246 GEFYHPILFFNNYWNLGADYMPINETVKELKLSVTFYPLSIFKYQMYASQNMRSQWSDYL 305
Query: 153 GFSEKDVDDVKGIFADTNLYLLSATVLIASFHLLFDFLAFKNDVSFWRRKRSLAGLSART 212
++D D VK +TN LL T+ ++ H + +FLAFKND+ FWR ++ L GLS R+
Sbjct: 306 HTEKEDDDSVKVALLETNPILLGVTIAVSLLHTVLEFLAFKNDIQFWRSRKDLVGLSVRS 365
Query: 213 VLWRAFSQFVIFMYLMDERTSLLVLIPAGISALIELWKVTKVLHLRVSFKAWKLRVW-RD 271
VL+ F ++F+Y+ D T+ +V G LIE WK+ KV+++ L V R
Sbjct: 366 VLFNIFQSLIVFLYICDNETNFMVKFSVGAGLLIECWKIPKVMNVEFDRTNPILGVIPRL 425
Query: 272 TSSDAN---EKTTAQADAEAMRYLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGV 328
SD E T D A RYLS +L+PL V A+YS++Y + WYSW L+ + +
Sbjct: 426 KFSDKGSYVESDTKVYDQMAFRYLSWVLFPLLVGYAVYSIIYVEQRGWYSWVLNMLYGYL 485
Query: 329 YAFGFLFMLPQLFVNYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTAHRMACFRDD 388
FGF+ M PQLF+NY+L+SVA LPWR YK NTFIDD+FAF+I MP +R+ CFRDD
Sbjct: 486 LMFGFITMTPQLFINYKLKSVAHLPWRMLTYKFINTFIDDLFAFVIKMPLLYRIGCFRDD 545
Query: 389 LVFLVYLYQRWLYPVDKTRVDTGASMDASSEEVETPKKKTE 429
++FL+YLYQRW+Y VD TR++ + V P + TE
Sbjct: 546 IIFLIYLYQRWIYRVDPTRMNEYGTSGEHEHGVPEPVEGTE 586
>U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 9 protein.
Length = 341
Score = 31.5 bits (68), Expect = 1.2
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 289 MRYLSMLLYPL--CVAGAIYSLVY--EPHKSWYSWA--LHSIVNGVYAFGFLFMLPQLFV 342
M + + + PL +A Y L + P + SW+ LH ++ +++ +L +
Sbjct: 58 MMFCAPRIIPLDYAMAHIFYGLCHFGHPFLCYASWSALLHLFIHSMWSL----LLSFAYR 113
Query: 343 NYRLRSVAALPWRAFMYKAFNTFIDDVFAFIITMPTA 379
NY L S W+ FM+ F +I FI+ M TA
Sbjct: 114 NYILSSAPPSTWKVFMFSVF-IYIPSFTQFIVLMFTA 149
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 30.3 bits (65), Expect = 2.7
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 91 IRGDK-FLPIIQH-NVLKSRMSHLLLLNNSMTKVNV---TVNVSPASYGIFRLALHVSLA 145
I GDK F+ ++++ NV K ++ L++ + T + T+N + F + L + A
Sbjct: 158 IPGDKCFVSLVEYGNVSKDKLEFLVVSSYGSTLQEILKKTINGPLSMDCSFVVGLQMLRA 217
Query: 146 FEHLHSLGFSEKDVDDVK---GIFAD-TNLYL 173
++LHSLG+ ++++ G+ D T+LYL
Sbjct: 218 IQNLHSLGYVHRNINPSAFNCGLGMDETSLYL 249
>L23645-9|AAK26134.1| 1226|Caenorhabditis elegans Hypothetical
protein F54F2.1 protein.
Length = 1226
Score = 29.5 bits (63), Expect = 4.8
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 68 TSSNKVTKVHTLLNFDY-RNPASMIRGDKFLPIIQHNVLKSRMSHLLLLNN 117
T +K++ +H +N+ Y + +RGDK P I V S + + + NN
Sbjct: 595 TMKDKLSPIHWSVNYTYVESKTGKLRGDKLEPAIDTTVPLSFQNKINIANN 645
>Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical
protein T22C1.3 protein.
Length = 421
Score = 29.1 bits (62), Expect = 6.3
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 291 YLSMLLYPLCVAGAIYSLVYEPHKSWYSWALHSIVNGVYAFGFLFMLPQLFVN 343
Y Y + +AG I S V+ W+ W + S N + FG + +N
Sbjct: 336 YKKHFRYTILIAGTIVSTVFLMPVMWHMWIVSSSGNANFFFGTTIVYNVALIN 388
>Z93389-7|CAB07669.2| 300|Caenorhabditis elegans Hypothetical
protein T13F3.5 protein.
Length = 300
Score = 28.7 bits (61), Expect = 8.4
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 84 YRNPASMIRGDKFLPIIQHNVLKSRMSHLLLLNNSMTKVNVTVNVSPASYGIFRLALHVS 143
Y +I+G+ F+ + +++ LLL N ++K + S G+ L +
Sbjct: 86 YNEQKKIIQGENFINLAFNDLQ-------LLLKNPISKFEFLEDKSIQDNGLRLLDVMKQ 138
Query: 144 LAFEHLHSLGFSEKDVDDVKGIFADTNLYLLSATVLIASFHLLFDFLAFKNDVSFWRRKR 203
HL S+ FS +DDV IF N ++ L F D D+ W+ +
Sbjct: 139 NGRVHLKSIKFSHCSIDDVLPIFPYLNAQVVEEIELY--FFKSADGFDRIRDLDQWKNAK 196
Query: 204 S 204
S
Sbjct: 197 S 197
>AF039053-18|AAC25881.2| 495|Caenorhabditis elegans Cytochrome p450
family protein 33C2 protein.
Length = 495
Score = 28.7 bits (61), Expect = 8.4
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 334 LFMLPQLFVNYRLRSVAALPWRAFMYKA-FNTFIDDVFAFIITMPTAHRMACFRDDL 389
LF P +F+ + +A L FMY+ F F D FAF AHR +DL
Sbjct: 206 LFGKPHMFLAMNIPVIAKL-MPEFMYEGPFKDFRDTAFAFFNKQIEAHRQEVDLNDL 261
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.137 0.419
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,170,925
Number of Sequences: 27539
Number of extensions: 413512
Number of successful extensions: 1285
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1278
Number of HSP's gapped (non-prelim): 10
length of query: 429
length of database: 12,573,161
effective HSP length: 83
effective length of query: 346
effective length of database: 10,287,424
effective search space: 3559448704
effective search space used: 3559448704
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 61 (28.7 bits)
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