BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002680-TA|BGIBMGA002680-PA|undefined
(361 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011794-1|AAH11794.1| 462|Homo sapiens microspherule protein 1... 294 3e-79
AY336730-1|AAQ84517.1| 475|Homo sapiens MCRS2 protein. 294 3e-79
AF068007-1|AAC68599.1| 534|Homo sapiens cell cycle-regulated fa... 294 3e-79
AF015308-1|AAC52086.1| 462|Homo sapiens nucleolar protein protein. 293 5e-79
U36501-1|AAC50743.1| 688|Homo sapiens SP100-B protein. 37 0.096
L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein. 37 0.096
L79987-1|AAL77439.1| 212|Homo sapiens nuclear autoantigen protein. 37 0.096
AF255565-1|AAK51202.1| 885|Homo sapiens nuclear body protein SP... 37 0.096
AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear autoa... 37 0.096
AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein. 37 0.096
DQ157848-1|ABA42890.1| 563|Homo sapiens schwannomin interacting... 35 0.39
DQ157847-1|ABA42889.1| 536|Homo sapiens schwannomin interacting... 34 0.68
EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding doma... 33 1.2
AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein. 33 1.2
BC050548-1|AAH50548.1| 1127|Homo sapiens KIF4A protein protein. 32 3.6
AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4... 32 3.6
AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4... 32 3.6
AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily mot... 32 3.6
AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated k... 32 3.6
U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein. 31 6.3
AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein. 31 6.3
DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein. 31 8.3
>BC011794-1|AAH11794.1| 462|Homo sapiens microspherule protein 1
protein.
Length = 462
Score = 294 bits (722), Expect = 3e-79
Identities = 140/237 (59%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
Query: 126 TKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVA 185
TKDLGRWKP DDL LI V QTNDL VH G+KFSCRFT+ E+Q RWYALLY+ IS++A
Sbjct: 129 TKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLA 188
Query: 186 VAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTS 245
AMR LHP+ +AA+Q +AL+S +EE+LL + STS PTLE FQ+LL ++P FY RT+
Sbjct: 189 CQAMRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLARTA 248
Query: 246 KTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLEMQ 305
K L AHWQL+KQY LL DQTV PLPK D+VL FSDAE+ ++D++L D +++ ++ E+
Sbjct: 249 KALQAHWQLMKQYYLLEDQTVQPLPK--GDQVLNFSDAEDLIDDSKLKDMRDEVLEHELM 306
Query: 306 MADRIEKKNIRLLENSLSRWQVLVQSVAG-GNVELDKNTLAVLRGRLVRYLMRSREV 361
+ADR +K+ IR LE L +WQVLV S+ G + + D TLAVLRGR+VRYLMRSRE+
Sbjct: 307 VADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLRGRMVRYLMRSREI 363
>AY336730-1|AAQ84517.1| 475|Homo sapiens MCRS2 protein.
Length = 475
Score = 294 bits (722), Expect = 3e-79
Identities = 140/237 (59%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
Query: 126 TKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVA 185
TKDLGRWKP DDL LI V QTNDL VH G+KFSCRFT+ E+Q RWYALLY+ IS++A
Sbjct: 142 TKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLA 201
Query: 186 VAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTS 245
AMR LHP+ +AA+Q +AL+S +EE+LL + STS PTLE FQ+LL ++P FY RT+
Sbjct: 202 CQAMRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLARTA 261
Query: 246 KTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLEMQ 305
K L AHWQL+KQY LL DQTV PLPK D+VL FSDAE+ ++D++L D +++ ++ E+
Sbjct: 262 KALQAHWQLMKQYYLLEDQTVQPLPK--GDQVLNFSDAEDLIDDSKLKDMRDEVLEHELM 319
Query: 306 MADRIEKKNIRLLENSLSRWQVLVQSVAG-GNVELDKNTLAVLRGRLVRYLMRSREV 361
+ADR +K+ IR LE L +WQVLV S+ G + + D TLAVLRGR+VRYLMRSRE+
Sbjct: 320 VADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLRGRMVRYLMRSREI 376
>AF068007-1|AAC68599.1| 534|Homo sapiens cell cycle-regulated
factor p78 protein.
Length = 534
Score = 294 bits (722), Expect = 3e-79
Identities = 140/237 (59%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
Query: 126 TKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVA 185
TKDLGRWKP DDL LI V QTNDL VH G+KFSCRFT+ E+Q RWYALLY+ IS++A
Sbjct: 201 TKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLA 260
Query: 186 VAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTS 245
AMR LHP+ +AA+Q +AL+S +EE+LL + STS PTLE FQ+LL ++P FY RT+
Sbjct: 261 CQAMRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLARTA 320
Query: 246 KTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLEMQ 305
K L AHWQL+KQY LL DQTV PLPK D+VL FSDAE+ ++D++L D +++ ++ E+
Sbjct: 321 KALQAHWQLMKQYYLLEDQTVQPLPK--GDQVLNFSDAEDLIDDSKLKDMRDEVLEHELM 378
Query: 306 MADRIEKKNIRLLENSLSRWQVLVQSVAG-GNVELDKNTLAVLRGRLVRYLMRSREV 361
+ADR +K+ IR LE L +WQVLV S+ G + + D TLAVLRGR+VRYLMRSRE+
Sbjct: 379 VADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLRGRMVRYLMRSREI 435
>AF015308-1|AAC52086.1| 462|Homo sapiens nucleolar protein protein.
Length = 462
Score = 293 bits (720), Expect = 5e-79
Identities = 140/237 (59%), Positives = 180/237 (75%), Gaps = 3/237 (1%)
Query: 126 TKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVA 185
TKDLGRWKP DDL LI V QTNDL VH G+KFSCRFT+ E+Q RWYALLY+ IS++A
Sbjct: 129 TKDLGRWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLA 188
Query: 186 VAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTS 245
AMR LHP+ +AA+Q +AL+S +EE+LL + STS PTLE FQ+LL ++P FY RT+
Sbjct: 189 CQAMRQLHPEAIAAIQSKALFSKAEEQLLSKVGSTSQPTLETFQDLLHRHPDAFYLGRTA 248
Query: 246 KTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLEMQ 305
K L AHWQL+KQY LL DQTV PLPK D+VL FSDAE+ ++D++L D +++ ++ E+
Sbjct: 249 KALQAHWQLMKQYYLLEDQTVQPLPK--GDQVLNFSDAEDLIDDSKLKDMRDEVLEHELM 306
Query: 306 MADRIEKKNIRLLENSLSRWQVLVQSVAG-GNVELDKNTLAVLRGRLVRYLMRSREV 361
+ADR +K+ IR LE L +WQVLV S+ G + + D TLAVLRGR+VRYLMRSRE+
Sbjct: 307 VADRRQKREIRQLEQELHKWQVLVDSITGMSSPDFDNQTLAVLRGRMVRYLMRSREI 363
>U36501-1|AAC50743.1| 688|Homo sapiens SP100-B protein.
Length = 688
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 505 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 564
Query: 127 KDLGRWK 133
RW+
Sbjct: 565 VQKKRWQ 571
>L79988-1|AAL77438.1| 403|Homo sapiens nuclear autoantigen protein.
Length = 403
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 29 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 88
Query: 127 KDLGRWK 133
RW+
Sbjct: 89 VQKKRWQ 95
>L79987-1|AAL77439.1| 212|Homo sapiens nuclear autoantigen protein.
Length = 212
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 29 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 88
Query: 127 KDLGRWK 133
RW+
Sbjct: 89 VQKKRWQ 95
>AF255565-1|AAK51202.1| 885|Homo sapiens nuclear body protein
SP100C protein.
Length = 885
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 505 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 564
Query: 127 KDLGRWK 133
RW+
Sbjct: 565 VQKKRWQ 571
>AF056322-1|AAC39790.1| 879|Homo sapiens SP100-HMG nuclear
autoantigen protein.
Length = 879
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 505 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 564
Query: 127 KDLGRWK 133
RW+
Sbjct: 565 VQKKRWQ 571
>AC010149-1|AAY14879.1| 843|Homo sapiens unknown protein.
Length = 843
Score = 37.1 bits (82), Expect = 0.096
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 69 RTQSYTSSSLPDLPIPANVPVISNNTTHER--RRHSSKVSGIMSGGKKARRKGHLSQLST 126
RT+S +S + D N + ++ R RRH SKV+G+ G KK R + HL+ +
Sbjct: 469 RTESSQASDMMDTMDVENNSTLEKHSGKRRKKRRHRSKVNGLQRGRKKDRPRKHLTLNNK 528
Query: 127 KDLGRWK 133
RW+
Sbjct: 529 VQKKRWQ 535
>DQ157848-1|ABA42890.1| 563|Homo sapiens schwannomin interacting
protein 1 variant 1 protein.
Length = 563
Score = 35.1 bits (77), Expect = 0.39
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 215 GTLSSTSHPTLEKFQELLDQNPHVFYPTRTS-KTLMAHWQLLKQYQLLPDQTVLPLPKNQ 273
G S +H + +++ P P + K + W+ Q Q P P P +
Sbjct: 19 GKYSFENHQLAMDAENNIEKYPLNLQPLESKVKIIQRAWREYLQRQE-PLGKRSPSPPSV 77
Query: 274 NDKVLTFSDAEETMNDNELPDYKEDGVDL 302
+ + L+ S + T +D+ PDY+EDG+DL
Sbjct: 78 SSEKLSSSVSMNTFSDSSTPDYREDGMDL 106
>DQ157847-1|ABA42889.1| 536|Homo sapiens schwannomin interacting
protein 1 variant 2 protein.
Length = 536
Score = 34.3 bits (75), Expect = 0.68
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 268 PLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDL 302
P P + + + L+ S + T +D+ PDY+EDG+DL
Sbjct: 45 PSPPSVSSEKLSSSVSMNTFSDSSTPDYREDGMDL 79
>EF542797-1|ABQ18300.1| 1494|Homo sapiens methyl-CpG binding domain
protein 5 protein.
Length = 1494
Score = 33.5 bits (73), Expect = 1.2
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 207 STSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAHWQLLKQYQLLPDQTV 266
S E ++ ++ S+ L Q LL+ N +F P + + L+ +Q L+ +Q Q+
Sbjct: 945 SAGEGDMSSINNTLSNHQLTHLQSLLNNN-QMFPPNQQQQQLLQGYQNLQAFQ---GQST 1000
Query: 267 LPLPKNQNDKVLTFSDAEETMNDN 290
+P P N N F + + M ++
Sbjct: 1001 IPCPANNNPMACLFQNFQVRMQED 1024
>AB040894-1|BAA95985.1| 1498|Homo sapiens KIAA1461 protein protein.
Length = 1498
Score = 33.5 bits (73), Expect = 1.2
Identities = 21/84 (25%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 207 STSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAHWQLLKQYQLLPDQTV 266
S E ++ ++ S+ L Q LL+ N +F P + + L+ +Q L+ +Q Q+
Sbjct: 949 SAGEGDMSSINNTLSNHQLTHLQSLLNNN-QMFPPNQQQQQLLQGYQNLQAFQ---GQST 1004
Query: 267 LPLPKNQNDKVLTFSDAEETMNDN 290
+P P N N F + + M ++
Sbjct: 1005 IPCPANNNPMACLFQNFQVIMQED 1028
>BC050548-1|AAH50548.1| 1127|Homo sapiens KIF4A protein protein.
Length = 1127
Score = 31.9 bits (69), Expect = 3.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E++LL TL LEK +E+ +QN + K
Sbjct: 935 LSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 993
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 994 LTLLQVASRQKHLPKDTLL 1012
>AL357752-3|CAI41487.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 31.9 bits (69), Expect = 3.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E++LL TL LEK +E+ +QN + K
Sbjct: 935 LSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 993
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 994 LTLLQVASRQKHLPKDTLL 1012
>AL139398-5|CAI41024.1| 1232|Homo sapiens kinesin family member 4A
protein.
Length = 1232
Score = 31.9 bits (69), Expect = 3.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E++LL TL LEK +E+ +QN + K
Sbjct: 935 LSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 993
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 994 LTLLQVASRQKHLPKDTLL 1012
>AF071592-1|AAD05492.2| 1232|Homo sapiens kinesin superfamily motor
KIF4 protein.
Length = 1232
Score = 31.9 bits (69), Expect = 3.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E++LL TL LEK +E+ +QN + K
Sbjct: 935 LSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 993
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 994 LTLLQVASRQKHLPKDTLL 1012
>AB208797-1|BAD92034.1| 1235|Homo sapiens Chromosome-associated
kinesin KIF4A variant protein.
Length = 1235
Score = 31.9 bits (69), Expect = 3.6
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E++LL TL LEK +E+ +QN + K
Sbjct: 938 LSQLQQSQMAEKQLEESVSEKEQQLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 996
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 997 LTLLQVASRQKHLPKDTLL 1015
>U30872-1|AAA82935.1| 3113|Homo sapiens mitosin protein.
Length = 3113
Score = 31.1 bits (67), Expect = 6.3
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 221 SHPTLEKFQELLDQ-NPHVFYPTRTSKTLMAHWQLLK-QYQLLPDQTVLPLPKNQNDKVL 278
S L+K + ++Q N + + SK L++ +L K +Y+L ++T+ K++N+K+L
Sbjct: 570 SQDLLKKREHHIEQLNDKLSKTEKESKALLSALELKKKEYELKEEKTLFSCWKSENEKLL 629
Query: 279 TFSDAEE 285
T ++E+
Sbjct: 630 TQMESEK 636
>AJ271784-1|CAB75427.1| 1232|Homo sapiens chromokinesin protein.
Length = 1232
Score = 31.1 bits (67), Expect = 6.3
Identities = 21/79 (26%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 189 MRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTL 248
+ L +A Q + S E+ LL TL LEK +E+ +QN + K
Sbjct: 935 LSQLQQSQMAEKQLEESVSEKEQRLLSTLKCQDEE-LEKMREVCEQNQQLLRENEIIKQK 993
Query: 249 MAHWQLLKQYQLLPDQTVL 267
+ Q+ + + LP T+L
Sbjct: 994 LTLLQVASRQKHLPKDTLL 1012
>DQ120629-1|ABB92415.1| 1185|Homo sapiens KIF4B protein.
Length = 1185
Score = 30.7 bits (66), Expect = 8.3
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 192 LHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAH 251
L +A Q + S E++L+ TL LEK +E+ +QN + K +
Sbjct: 938 LQESQMAEKQLEKSASEKEQQLVSTLQCQDEE-LEKMREVCEQNQQLLQENEIIKQKLIL 996
Query: 252 WQLLKQYQLLPDQTVL 267
Q+ + + LP+ T+L
Sbjct: 997 LQVASRQKHLPNDTLL 1012
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,724,718
Number of Sequences: 224733
Number of extensions: 1890207
Number of successful extensions: 5146
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5125
Number of HSP's gapped (non-prelim): 23
length of query: 361
length of database: 73,234,838
effective HSP length: 91
effective length of query: 270
effective length of database: 52,784,135
effective search space: 14251716450
effective search space used: 14251716450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 66 (30.7 bits)
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