Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002680-TA|BGIBMGA002680-PA|undefined
(361 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0331 - 33181757-33181795,33182325-33182453,33182941-331829... 46 5e-05
07_01_0657 - 4915264-4915386,4915586-4915714,4917773-4917859,491... 42 6e-04
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 33 0.47
08_02_0318 + 15710834-15711775 29 4.4
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 29 4.4
02_01_0313 + 2097302-2097657,2099389-2100502 29 4.4
01_06_1163 - 35018862-35019623,35019702-35019951,35020871-35020929 29 4.4
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 5.8
12_01_0076 + 627796-627877,628706-628944,629129-629326,629415-62... 29 5.8
11_01_0172 - 1383568-1384440,1385336-1385401,1385470-1385505,138... 29 5.8
10_08_0204 + 15780718-15780783,15781674-15781731,15781982-157821... 29 5.8
08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,438... 29 5.8
04_04_1331 - 32706043-32707248,32707411-32707652,32707737-327085... 29 5.8
02_05_0030 + 25209067-25209130,25209231-25209400,25210482-252116... 29 5.8
04_04_0118 - 22889608-22890816,22891990-22892261,22892306-228931... 29 7.6
>03_06_0331 -
33181757-33181795,33182325-33182453,33182941-33182967,
33183459-33183545,33183827-33183975,33185467-33185521,
33185596-33187584,33188705-33188782
Length = 850
Score = 46.0 bits (104), Expect = 5e-05
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 132 WKPTDDLALILGVQQTNDLRIVHRG-IKFSCRFTVSELQSRWYALLYNAEISRVAVAAMR 190
W DD+ L V+ L + +G + FS +FT+ E+Q RW +LLY+ EIS A A M
Sbjct: 13 WLVEDDILLKNAVETGASLEALAKGAVCFSRKFTLKEIQDRWNSLLYDPEISTQASARMV 72
Query: 191 NLHPDL 196
DL
Sbjct: 73 EYENDL 78
>07_01_0657 -
4915264-4915386,4915586-4915714,4917773-4917859,
4918220-4918368,4918498-4918555,4918632-4920614,
4922064-4922123
Length = 862
Score = 42.3 bits (95), Expect = 6e-04
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 132 WKPTDDLALILGVQQTNDLRIVHRG-IKFSCRFTVSELQSRWYALLYNAEISRVAVAAMR 190
W DD+ L V+ L + +G + FS +FT+ ELQ RW +LLY++E S A A +
Sbjct: 7 WTAEDDVLLKNAVEAGASLESLAKGAVCFSRKFTLQELQDRWSSLLYDSETSGQASALIV 66
Query: 191 NLHPDL 196
+L
Sbjct: 67 KYETEL 72
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 32.7 bits (71), Expect = 0.47
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 282 DAEETMNDNELPDYKEDGVDLEMQMADRIEKKNIRLLENSLSRWQVLVQSVAGGNVEL 339
D ++T+ NEL KED DL+ + + K+ I+ ++ ++ Q LVQ + GNVEL
Sbjct: 363 DEKKTLQ-NELCHLKEDRSDLDKKHSSI--KEQIQAVDLNVESLQALVQELKDGNVEL 417
>08_02_0318 + 15710834-15711775
Length = 313
Score = 29.5 bits (63), Expect = 4.4
Identities = 12/45 (26%), Positives = 27/45 (60%)
Query: 65 DKRMRTQSYTSSSLPDLPIPANVPVISNNTTHERRRHSSKVSGIM 109
++RMR ++Y ++L +P+P V ++ ++ E R +S V+ +
Sbjct: 220 NRRMRARAYALAALVVVPLPVQVVALALSSVWETPRRTSPVAAFL 264
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 29.5 bits (63), Expect = 4.4
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 242 TRTSKTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKEDGVD 301
TR S ++H+ Q + LPD + +P DK + +DA + N + P G++
Sbjct: 590 TRVSLDRLSHFL---QQEELPDDATITVPHGSTDKAININDATFSWNPSS-PTPTLSGIN 645
Query: 302 LEMQMADRI 310
L + R+
Sbjct: 646 LSVVRGMRV 654
>02_01_0313 + 2097302-2097657,2099389-2100502
Length = 489
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/39 (38%), Positives = 19/39 (48%)
Query: 250 AHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMN 288
A+W + L PD V L N DKV F E+TM+
Sbjct: 34 ANWGTQASHPLAPDTVVQMLKDNGFDKVKLFDAGEDTMS 72
>01_06_1163 - 35018862-35019623,35019702-35019951,35020871-35020929
Length = 356
Score = 29.5 bits (63), Expect = 4.4
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 82 PIPANVPVISNNTTHERRRHSSKVSGIMSGGKKARRKGHLSQLSTKDL 129
P+P P ++ TTH R R +K + G R L+ S +DL
Sbjct: 54 PMPPMAPATNSGTTHARSRSKAKPVINLDDGDNVRTAKRLTWASDEDL 101
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 56 LPGASVGKGDKRMRTQSYTSSSLPDLPIPANV-PVISNNTTHERRRHSSKVSGIMSGG 112
LP S GD+ +T + + L L P V I ++ E+ R+S SG +S G
Sbjct: 366 LPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAG 423
>12_01_0076 +
627796-627877,628706-628944,629129-629326,629415-629474,
629596-629739,631700-631864,632636-632734,633114-633182,
633274-633370,633994-634085,635021-635152,635446-635526,
636284-636400,636497-636598
Length = 558
Score = 29.1 bits (62), Expect = 5.8
Identities = 27/138 (19%), Positives = 64/138 (46%), Gaps = 7/138 (5%)
Query: 181 ISRVAVAAMRNLHPDLVAA---VQQQALYSTSEEELLGTLSSTSHPTLEK---FQELLDQ 234
++++ V +R+ H L +A + +A+ SE+++ + + H T + F++ +
Sbjct: 51 LTKIPVTLLRSKHSSLCSACENITSEAVNFLSEKQIQDKIMTILHDTCSQTFSFEQKCLE 110
Query: 235 NPHVFYPTRTSKTL-MAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELP 293
+ +K + + KQY L D +L K+++ V +E M+ + P
Sbjct: 111 TMDSYATLVFAKIAEIKPDEFCKQYGLCRDMALLSAMKSESTCVFCHHIIDEIMSKLKDP 170
Query: 294 DYKEDGVDLEMQMADRIE 311
D + + + L ++ ++IE
Sbjct: 171 DAEFEIIQLLLKECNKIE 188
>11_01_0172 -
1383568-1384440,1385336-1385401,1385470-1385505,
1385604-1385743,1386978-1387134,1387245-1387418,
1387540-1387790,1390296-1390446
Length = 615
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 56 LPGASVGKGDKRMRTQSYTSSSLPDLPIPANV-PVISNNTTHERRRHSSKVSGIMSGG 112
LP S GD+ +T + + L L P V I ++ E+ R+S SG +S G
Sbjct: 390 LPATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAG 447
>10_08_0204 +
15780718-15780783,15781674-15781731,15781982-15782142,
15782221-15782982
Length = 348
Score = 29.1 bits (62), Expect = 5.8
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 82 PIPANVPVISNNTTHERRRHSSKVSGIMSGGKKARRKGHLSQLSTKDL 129
P+P P ++ TTH R R +K + G R L+ S +DL
Sbjct: 46 PMPPMAPTTNSGTTHARSRSKAKPVINLDDGDDVRTAKRLTWASDEDL 93
>08_01_0505 - 4379722-4380795,4380868-4381008,4381099-4381270,
4381944-4382047,4382127-4382259,4384477-4384653,
4385164-4385309,4385536-4385625,4385703-4385915,
4386090-4386182,4386743-4386937,4387018-4387110,
4387924-4388019,4388556-4388985,4389424-4390091,
4392074-4392271,4392690-4393407,4394036-4394181
Length = 1628
Score = 29.1 bits (62), Expect = 5.8
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 175 LLYNAEISRVAVAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQ 234
+++ + + VAA L PD V +Q + ELL + ++ +E+ ++
Sbjct: 1198 MMFATKYGKEFVAAATELMPD--CGVNRQII------ELLSIRAPPVDVKMKLLKEIAEE 1249
Query: 235 NPHVFYPTRT-SKTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNE 291
+ + P+ T ++ L H LL T LPLPK ++++ L S AE D E
Sbjct: 1250 HEIDWDPSATETEYLKPHEDLLNGPTYFNGST-LPLPKEKHEETLAASAAEHPDEDYE 1306
>04_04_1331 -
32706043-32707248,32707411-32707652,32707737-32708562,
32708640-32708863,32708946-32709262,32709381-32709443,
32709465-32709640,32710609-32710985,32711416-32711470,
32711614-32711913
Length = 1261
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/64 (28%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 186 VAAMRNLHPDLVAAVQQ-QALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRT 244
++ +RN++ ++A +QQ Q + + + +ELL SS ++ +L +FQE+ TR
Sbjct: 570 LSTIRNVN--MIAVIQQGQVVETGTHDELLAKGSSGAYASLIRFQEMAQNRDLGGASTRR 627
Query: 245 SKTL 248
S+++
Sbjct: 628 SRSM 631
>02_05_0030 +
25209067-25209130,25209231-25209400,25210482-25211668,
25211695-25212011,25212669-25213374,25214248-25215448
Length = 1214
Score = 29.1 bits (62), Expect = 5.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 216 TLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAHW 252
TL + SH + K+ +L ++P + Y T + T+ A W
Sbjct: 678 TLYNISHTSTTKYPNVLLRSPAIQYTTTVNSTVSASW 714
>04_04_0118 -
22889608-22890816,22891990-22892261,22892306-22893131,
22893311-22893534,22893620-22893936,22894035-22894294,
22894723-22894923,22895015-22895190,22895445-22895718
Length = 1252
Score = 28.7 bits (61), Expect = 7.6
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 195 DLVAAVQQ-QALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKT 247
D++A +QQ Q + + + +ELL SS ++ L +FQE+ TR S++
Sbjct: 557 DMIAVIQQGQVVETGTHDELLAKGSSGAYAALIRFQEMARNRDFRGPSTRKSRS 610
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,679,405
Number of Sequences: 37544
Number of extensions: 375938
Number of successful extensions: 1236
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1226
Number of HSP's gapped (non-prelim): 18
length of query: 361
length of database: 14,793,348
effective HSP length: 83
effective length of query: 278
effective length of database: 11,677,196
effective search space: 3246260488
effective search space used: 3246260488
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 61 (28.7 bits)
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