Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002680-TA|BGIBMGA002680-PA|undefined
(361 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical ... 65 8e-11
AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical ... 31 0.96
U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical p... 30 2.2
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z69637-2|CAA93466.1| 199|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016430-9|AAB65374.1| 467|Caenorhabditis elegans Hypothetical ... 29 3.9
U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical pr... 29 6.8
AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical ... 29 6.8
AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical ... 29 6.8
AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical ... 28 9.0
>AL023815-5|CAA19428.2| 366|Caenorhabditis elegans Hypothetical
protein H28O16.2 protein.
Length = 366
Score = 64.9 bits (151), Expect = 8e-11
Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 126 TKDLGRWKPTDDLALILGVQQTNDLRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVA 185
T + W DDLAL+ V +R +H + FS +FT S+++ R+ L+++ EIS+ A
Sbjct: 101 TNPMRIWTVADDLALLTAVAHVQCIRFIHNSLTFSRKFTFSDVEERYCQLMFDEEISKSA 160
Query: 186 VAAMRNLHPDLVAAVQQQALYSTSEEELLGTLSST-------------SHP--TLEKFQE 230
+ + L A ++ + ++ +EE L L+ +H T+ F++
Sbjct: 161 KVRLDAMPHRLKAQIEARTPFTRNEERTLMELAENQLKNARKERQDVENHTVLTILHFKK 220
Query: 231 LLDQNPHVFYPTRTSKTLMAHWQLLKQYQ 259
+LD N F+ +RT + L H++ +K Y+
Sbjct: 221 ILDGNRQSFHKSRTPQVLSDHYRRIKGYR 249
>AC084161-2|AAK29732.3| 782|Caenorhabditis elegans Hypothetical
protein Y92H12A.4 protein.
Length = 782
Score = 31.5 bits (68), Expect = 0.96
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 153 VHRGIKFSCRFTVSELQSRWYALLYNAEISRVAVAAMRNLHPDLV------AAVQQQALY 206
+ R + + RF LQ +L N++I R +RN+ PD V +++ +
Sbjct: 443 IRRNVNSAMRFIKDRLQHNLPQILENSKIDRKVSELLRNVFPDFVRNPIGNSSIIRPKKK 502
Query: 207 STSEEELLGTLSSTSHPTLEK 227
ST EE+ + S+S P L +
Sbjct: 503 STDEEK---AIKSSSEPALSE 520
>U20861-12|AAA62299.1| 403|Caenorhabditis elegans Hypothetical
protein C28H8.11a protein.
Length = 403
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 197 VAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAH 251
+A + +QA ++ EE+ L++ H T + FQ +LD H + R L++H
Sbjct: 232 LADLAKQAADPSNTEEIAKQLTAEYHKTADAFQSILDPRQHEQH-IRNGNRLLSH 285
>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
C50C3.2 protein.
Length = 2107
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 302 LEMQMADRIEKKNIRLLENSLSRWQVLVQSVAGGNVELDKNTLAVLRGRLVRYLMRSREV 361
LE Q D I+ ++L E ++S+ + VAG ++ L LR R+V L RS+EV
Sbjct: 997 LESQTEDVIDAIQMKLEEINVSQSTSRKRQVAGDDLSNLAGDLETLRRRVVEALDRSKEV 1056
>Z70780-6|CAA94823.1| 614|Caenorhabditis elegans Hypothetical
protein F46B6.7 protein.
Length = 614
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 269 LPKNQNDKVLTFSDAEETMNDNELPDYKEDGVDLE 303
L ++ D + TF D++E DNE +++ED +D +
Sbjct: 409 LAEDFEDTMPTFQDSDEEEEDNEWCEWQEDNLDAD 443
>Z69637-2|CAA93466.1| 199|Caenorhabditis elegans Hypothetical
protein F35G2.2 protein.
Length = 199
Score = 29.5 bits (63), Expect = 3.9
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Query: 144 VQQTND-LRIVHRGIKFSCRFTVSELQSRWYALLYNAEISRVAVAAMRNLHPDLVAAVQQ 202
+ T D L+ V I V LQ+ + L + V A H D A +Q
Sbjct: 91 IPPTEDTLKKVQNVILVGIEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHTDRHFAFKQ 150
Query: 203 Q----ALYSTSEEELLGTLSSTSHPTLEKFQELL 232
A+ +TSE +LG + + HP ++ Q+L+
Sbjct: 151 MEQAGAILTTSEATILGLVGGSDHPKFKEVQKLI 184
>AF016430-9|AAB65374.1| 467|Caenorhabditis elegans Hypothetical
protein C05C8.7 protein.
Length = 467
Score = 29.5 bits (63), Expect = 3.9
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 216 TLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAHWQLLKQYQLL 261
TLS HPT E+ + L +++P + YP R K +A+ L +++LL
Sbjct: 97 TLSLQVHPTKEQARRLHEKDP-IHYPDRNHKPELAY--ALTRFELL 139
>U80448-8|AAB37821.3| 1014|Caenorhabditis elegans Hypothetical
protein F59A3.1 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 196 LVAAVQQQALYSTSEEELLGTLSSTSHPTLEKFQELLDQNPHVFYPTRTSKTLMAH-WQL 254
L+AAV+++ E++ T + T +F ++LD++ VF P L H +
Sbjct: 687 LIAAVEKRT--EAMAYEMMSTYCNPD--TKSEFSDILDESTLVFMPEIPHTQLNCHDYDT 742
Query: 255 LKQYQLLPDQTVLPLPK 271
+ ++LL D + +P+
Sbjct: 743 ISPFKLLFDDAIAAVPQ 759
>AF047661-6|AAC04438.2| 577|Caenorhabditis elegans Hypothetical
protein M70.5 protein.
Length = 577
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/86 (19%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Query: 239 FYPTRTSKTLMAHWQLLKQYQLLPDQTVLPLPKNQNDKVLTFSDAEETMNDNELPDYKED 298
++P +T W++LK Q+L ++ + + + D + SD+E + E D+ +
Sbjct: 150 YFPAIPPETAENAWEILKNLQILKEKAI--KTEEEEDIIYLSSDSESEDAEAERDDFLQK 207
Query: 299 GVDLEMQMADRIEKKNIRLLENSLSR 324
+ + K L LS+
Sbjct: 208 SNVSQANFIKHLSKDRAHLKMKKLSK 233
>AC087794-2|AAG53703.2| 840|Caenorhabditis elegans Hypothetical
protein Y32G9A.6 protein.
Length = 840
Score = 28.7 bits (61), Expect = 6.8
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 281 SDAEE--TMNDNELPDYKEDGVDLEMQMADRIEKKNIRLLENSLSRWQVLVQSVAGGNVE 338
SD E T DN+ + K D D+E ++ + K + L +R +V ++S G N +
Sbjct: 544 SDLSESSTSTDNDSEEDKSDDEDVERKVTVQETKATVPLAAAKKTRKEVRIES--GSNKK 601
Query: 339 LDKNTLAVLRGRLVRYLMRSREV 361
K + + RG +V + R EV
Sbjct: 602 --KKSASKSRGNVVMRVRREPEV 622
>AL032630-2|CAA21559.1| 217|Caenorhabditis elegans Hypothetical
protein Y62H9A.2 protein.
Length = 217
Score = 28.3 bits (60), Expect = 9.0
Identities = 23/88 (26%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 151 RIVHRGIKFSCRFTVSELQSR-WYALLYNAEISRVAVAAMRNL------HPDLVAAVQQQ 203
+IV++ F F+ + +++ W AL E++ V ++ ++ DLV A++Q
Sbjct: 39 KIVNKNSDFKNNFSYDKREAKKWTALRAECELTIERVKSLDHILCRGSSKTDLVYALKQS 98
Query: 204 ALYSTSEEELLGTLSSTSHPTLEKFQEL 231
A T EE+ + S S P+++K + L
Sbjct: 99 AQIYTRREEMFEIVDS-SPPSIDKRRTL 125
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.131 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,091,301
Number of Sequences: 27539
Number of extensions: 322215
Number of successful extensions: 1012
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1004
Number of HSP's gapped (non-prelim): 13
length of query: 361
length of database: 12,573,161
effective HSP length: 82
effective length of query: 279
effective length of database: 10,314,963
effective search space: 2877874677
effective search space used: 2877874677
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 60 (28.3 bits)
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