Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002679-TA|BGIBMGA002679-PA|IPR000387|Tyrosine specific
protein phosphatase and dual specificity protein phosphatase,
IPR000340|Dual specificity protein phosphatase
(146 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 71 3e-13
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 70 7e-13
05_01_0120 - 828834-831143 69 2e-12
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 55 2e-08
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 55 2e-08
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 43 1e-04
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 41 5e-04
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 39 0.002
10_08_0930 - 21641818-21642240,21642731-21642820,21642902-216429... 37 0.006
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 37 0.007
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 36 0.010
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 36 0.013
01_04_0135 - 16494605-16494618,16494676-16494829 35 0.030
08_02_0502 + 17844775-17845092,17845528-17845634,17846039-178464... 29 1.1
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476... 29 1.5
02_02_0429 - 10135695-10135769,10135872-10135972,10138416-101385... 29 2.0
05_07_0004 + 26990250-26990516,26990877-26990931,26991286-269914... 28 3.4
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 71.3 bits (167), Expect = 3e-13
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 5 SVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLMDLPTTDISK 64
++AA+ L+ +GI ++L + Q D+ + D YK F + D +IS
Sbjct: 709 ALAARSMYTLQHLGITHILCLCSNE-IGQSDSQ---FPDL--FEYKNFSISDDDDANISD 762
Query: 65 YFHIAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTV-RARRDI 123
F A+++ D GG+VLVHC G SRSAT LA+LM+++G++L +A + + R
Sbjct: 763 LFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWNLLKKVHRRA 822
Query: 124 HPNDGF 129
PNDGF
Sbjct: 823 QPNDGF 828
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 70.1 bits (164), Expect = 7e-13
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 5 SVAAKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLMDLPTTDISK 64
++AA+ L+ +GI +VL + Q ++ D Y+ F + D DIS
Sbjct: 636 ALAARSTYTLKHLGITHVLCLCANE-IGQAESQQPDRFD-----YQNFSINDDENADISD 689
Query: 65 YFHIAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTV-RARRDI 123
F A++FID G+VLVHC G SRSAT LA+LM+++ +L EA + + R
Sbjct: 690 VFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWNMLKKVHRRA 749
Query: 124 HPNDGF 129
HPNDGF
Sbjct: 750 HPNDGF 755
>05_01_0120 - 828834-831143
Length = 769
Score = 68.9 bits (161), Expect = 2e-12
Identities = 45/123 (36%), Positives = 66/123 (53%), Gaps = 10/123 (8%)
Query: 8 AKDKAFLRRMGINYVLNTAEGKRYTQVDTDHLYYRDCPGLRYKGFQLMDLPTTDISKYFH 67
AK++ LR+ GI +VLN G + Y++ L Y+ L D PT DI+ +
Sbjct: 160 AKNRDILRKNGITHVLNCV-GFVCPE------YFKS--DLVYRTLWLQDSPTEDITSILY 210
Query: 68 IAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARRDI-HPN 126
++ ++ GGRV VHC GVSRS + +A+LM + G S +A V+A R I +PN
Sbjct: 211 DVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQLVKAARGIANPN 270
Query: 127 DGF 129
GF
Sbjct: 271 MGF 273
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 54 LMDLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEA 113
L D ++ + +FIDEG G VLVHC GVSRSAT +A+LM SL EA
Sbjct: 101 LRDTEEENLLDHLEPCLDFIDEGRKEGN-VLVHCFAGVSRSATIIVAYLMRTEQKSLEEA 159
Query: 114 LCTVR-ARRDIHPNDGF 129
L +++ PNDGF
Sbjct: 160 LESLKEVNESACPNDGF 176
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 54 LMDLPTTDISKYFHIAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEA 113
L D ++ + +FIDEG G VLVHC GVSRSAT +A+LM SL EA
Sbjct: 101 LRDTEEENLLDHLEPCLDFIDEGRKEGN-VLVHCFAGVSRSATIIVAYLMRTEQKSLEEA 159
Query: 114 LCTVR-ARRDIHPNDGF 129
L +++ PNDGF
Sbjct: 160 LESLKEVNESACPNDGF 176
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 42.7 bits (96), Expect = 1e-04
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 82 RVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARR 121
RVLVHCM G SRSA +AFLM +G L++ V+ RR
Sbjct: 107 RVLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVKERR 146
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 40.7 bits (91), Expect = 5e-04
Identities = 23/53 (43%), Positives = 27/53 (50%)
Query: 69 AANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARR 121
A +FI S GG VHC G RS T L +L+ R MS AL VR+ R
Sbjct: 145 AIDFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVRSIR 197
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 69 AANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 126
A +FI S GG VHC G RS T L +L+ R M+ AL R+ + N
Sbjct: 149 AVDFIHRNASQGGSTYVHCKAGRGRSTTIVLCYLIKYRNMTPEAALDHARSAVKLFSN 206
>10_08_0930 -
21641818-21642240,21642731-21642820,21642902-21642984,
21643512-21643605,21644366-21644488,21644893-21645168
Length = 362
Score = 37.1 bits (82), Expect = 0.006
Identities = 31/95 (32%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 34 VDTDHLYYRDCPGLRYK--GFQLMDLPTTDI---SKYFHI--AANFIDEGVSSGGRVLVH 86
V + Y R P Y+ G + + LPT D + ++ AA+FI G VH
Sbjct: 117 VTLNESYERLVPRCLYEAHGIENLVLPTRDYLYAPSFENLCRAADFIHRNALCGKLTYVH 176
Query: 87 CMIGVSRSATCALAFLMIKRGMSLTEALCTVRARR 121
C G RS T L +L+ + M+ EA VR RR
Sbjct: 177 CKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVRLRR 211
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 36.7 bits (81), Expect = 0.007
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 69 AANFIDEGVSSG-GRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 126
A + ++ +S G GRV VHC G+ R+ A+A++ M L A + ++R PN
Sbjct: 160 AVSSLEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMDLRTAYEKLTSKRPCGPN 218
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 36.3 bits (80), Expect = 0.010
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 69 AANFIDEGVSSGGRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARR 121
A +FI S G +HC G RS T L +L+ + M+ + A VR++R
Sbjct: 121 AVDFIHRNASCGRMTYIHCKAGRGRSTTIVLCYLVKYKNMTPSTAFEHVRSKR 173
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 35.9 bits (79), Expect = 0.013
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 73 IDEGVSSG-GRVLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARRDIHPN 126
++ +S G GRV VHC G+ R+ A+A++ M+L A + ++R PN
Sbjct: 268 LEWAISEGKGRVYVHCTAGLGRAPAVAIAYMFWFENMNLKTAYEKLTSKRPCGPN 322
>01_04_0135 - 16494605-16494618,16494676-16494829
Length = 55
Score = 34.7 bits (76), Expect = 0.030
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 94 SATCALAFLMIKRGMSLTEALCTVRARR-DIHPNDGF 129
S T +A+LM K MSL AL VR++R + PN+GF
Sbjct: 3 SVTIIVAYLMKKHQMSLENALSLVRSKRPQVAPNEGF 39
>08_02_0502 +
17844775-17845092,17845528-17845634,17846039-17846492,
17846623-17846694,17846804-17846925,17847079-17847294,
17847392-17847500,17847618-17847730,17847916-17848063,
17848274-17848396
Length = 593
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 11 KAFLRRMGINYVLN-TAEGKRYTQVDTDHLYYRDCP--GLRYKGFQLMDLPTTDISKYFH 67
K MGI VLN +E +R C + + + ++ + D+ K
Sbjct: 311 KMLSETMGITAVLNFQSESERTNWGINSEAINNSCRENNILMVNYPIREVDSMDLRKKLS 370
Query: 68 IAANFIDEGVSSGGRVLVHCMIGVSRSATCALAFL 102
+ + R+ V C G RS C +A+L
Sbjct: 371 FCVGLLLRLIRKNYRIYVTCTTGYDRSPACVIAYL 405
>12_01_0584 -
4762476-4762613,4763986-4764075,4765048-4765146,
4766032-4766154,4766243-4766405,4767307-4767356,
4767826-4767942,4769477-4769683,4769763-4769900,
4771212-4771274,4771358-4771441,4771933-4772084,
4772219-4772357,4772814-4772924
Length = 557
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 83 VLVHCMIGVSRSATCALAFLMIKRGMSLTEALCTVRARR--DIHPND 127
+LVHC G +R+ + +LM + S+TEAL RR I+ ND
Sbjct: 200 ILVHCTHGHNRTGFMIVHYLMRTQLSSVTEALNIFAQRRPPGIYKND 246
>02_02_0429 -
10135695-10135769,10135872-10135972,10138416-10138532,
10138810-10139041,10142326-10142442,10142762-10142827
Length = 235
Score = 28.7 bits (61), Expect = 2.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 3 YTSVAAKDKAFLRRMG--INYVLNTAEGKRYTQVDTDHLYYRDC 44
Y + KD AFLRR+G N+++ +G + D LY+ C
Sbjct: 178 YHLLPRKDLAFLRRLGHRDNHLVIRVDGAKELHFGVDILYHMSC 221
>05_07_0004 +
26990250-26990516,26990877-26990931,26991286-26991461,
26991702-26991923,26992001-26992239,26992437-26992962,
26993042-26993315,26993391-26994009,26994082-26994121,
26994263-26994310,26994548-26994814,26994892-26995155,
26995260-26995904
Length = 1213
Score = 27.9 bits (59), Expect = 3.4
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 7/84 (8%)
Query: 51 GFQLMDLPTTDISKYFHIAANFIDEGVSSGGRV------LVHCMIGVSRSATCALAFLMI 104
GF M L T Y+ + A F+ +G S+ G V LV M+GVS +A A
Sbjct: 878 GFSNMMLFMTSALCYY-VGAKFVSQGNSTFGDVFKAFFSLVVAMLGVSSTAAMASDSSKA 936
Query: 105 KRGMSLTEALCTVRARRDIHPNDG 128
K S A+ +++ D N+G
Sbjct: 937 KDSASSIFAILDRKSQIDSSSNEG 960
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.327 0.139 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,689,915
Number of Sequences: 37544
Number of extensions: 136000
Number of successful extensions: 318
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 301
Number of HSP's gapped (non-prelim): 17
length of query: 146
length of database: 14,793,348
effective HSP length: 76
effective length of query: 70
effective length of database: 11,940,004
effective search space: 835800280
effective search space used: 835800280
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 56 (26.6 bits)
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