GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002678-TA|BGIBMGA002678-PA|IPR006020|Phosphotyrosine
interaction region, IPR000980|SH2 motif
         (418 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            32   0.033
AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.            32   0.033
AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.            32   0.033
AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.            32   0.033
AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.            32   0.033
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.9  

>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.033
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 124 PRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEF 183
           P  S AS GD  +    +  +      +   C+V     +LA D+  TIGQAF+L ++ +
Sbjct: 96  PTSSIASSGDDTNSSNNSTTSNGTE--DRHECFVF-ISNKLASDITLTIGQAFDLAYRRY 152

Query: 184 LT 185
           ++
Sbjct: 153 VS 154


>AY341160-1|AAR13724.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.033
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 124 PRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEF 183
           P  S AS GD  +      +  S    +   C+V     +LA D+  TIGQAF+L ++ +
Sbjct: 96  PTSSIASSGDDTNSSN--NLTTSNGTEDRHECFVF-ISNKLASDITLTIGQAFDLAYRRY 152

Query: 184 LT 185
           ++
Sbjct: 153 VS 154


>AY341159-1|AAR13723.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.033
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 124 PRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEF 183
           P  S AS GD  +    +  +      +   C+V     +LA D+  TIGQAF+L ++ +
Sbjct: 96  PTSSIASSGDDTNSSNNSTTSNGTE--DRHECFVF-ISNKLASDITLTIGQAFDLAYRRY 152

Query: 184 LT 185
           ++
Sbjct: 153 VS 154


>AY341158-1|AAR13722.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.033
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 124 PRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEF 183
           P  S AS GD  +    +  +      +   C+V     +LA D+  TIGQAF+L ++ +
Sbjct: 96  PTSSIASSGDDTNSSNNSTTSNGTE--DRHECFVF-ISNKLASDITLTIGQAFDLAYRRY 152

Query: 184 LT 185
           ++
Sbjct: 153 VS 154


>AY341157-1|AAR13721.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 31.9 bits (69), Expect = 0.033
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 124 PRVSFASGGDADSLDYVAYVAKSAPPTEWRACYVLECGGRLAQDVIATIGQAFELRFKEF 183
           P  S AS GD  +    +  +      +   C+V     +LA D+  TIGQAF+L ++ +
Sbjct: 96  PTSSIASSGDDTNSSNNSTTSNGTE--DRHECFVF-ISNKLASDITLTIGQAFDLAYRRY 152

Query: 184 LT 185
           ++
Sbjct: 153 VS 154


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 8.9
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 6/65 (9%)

Query: 89   PRMSHSGANVALTVSSKAITLAVLEGGDTIARHDMPRVSFASGGDADSLDYVAYVAKSAP 148
            P + +S A  A   ++ A  LA   G                G  A +LD VA  A  AP
Sbjct: 1164 PSIPNSNAGAATPTATTAAPLAPTTGNSKGGG------GVVQGDTATALDEVALPAPPAP 1217

Query: 149  PTEWR 153
            PT  R
Sbjct: 1218 PTSKR 1222


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.133    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,399
Number of Sequences: 2123
Number of extensions: 12393
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 6
length of query: 418
length of database: 516,269
effective HSP length: 66
effective length of query: 352
effective length of database: 376,151
effective search space: 132405152
effective search space used: 132405152
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)