GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002677-TA|BGIBMGA002677-PA|undefined
         (168 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457220-1|CAG33501.1|  183|Homo sapiens STRAIT11499 protein.          42   0.001
BC019332-1|AAH19332.1|  183|Homo sapiens MID1IP1 protein protein.      42   0.001
BC008908-1|AAH08908.1|  183|Homo sapiens MID1 interacting protei...    42   0.001
AK001248-1|BAA91580.1|  183|Homo sapiens protein ( Homo sapiens ...    42   0.001
AJ272057-1|CAB89113.1|  183|Homo sapiens hypothetical protein pr...    42   0.001
L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase ki...    29   8.0  
BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase ...    29   8.0  

>CR457220-1|CAG33501.1|  183|Homo sapiens STRAIT11499 protein.
          Length = 183

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 31 KQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTELLWSGGDS 90
          K S+ N M +F+  VN MD+TV+VPS L ++P     DP     + ND+  E+  SGG  
Sbjct: 11 KHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLA---DP----GLDNDVGVEVGGSGGCL 63

Query: 91 QEQ 93
          +E+
Sbjct: 64 EER 66


>BC019332-1|AAH19332.1|  183|Homo sapiens MID1IP1 protein protein.
          Length = 183

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 31 KQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTELLWSGGDS 90
          K S+ N M +F+  VN MD+TV+VPS L ++P     DP     + ND+  E+  SGG  
Sbjct: 11 KHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLA---DP----GLDNDVGVEVGGSGGCL 63

Query: 91 QEQ 93
          +E+
Sbjct: 64 EER 66


>BC008908-1|AAH08908.1|  183|Homo sapiens MID1 interacting protein
          1 (gastrulation specific G12 homolog (zebrafish))
          protein.
          Length = 183

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 31 KQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTELLWSGGDS 90
          K S+ N M +F+  VN MD+TV+VPS L ++P     DP     + ND+  E+  SGG  
Sbjct: 11 KHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLA---DP----GLDNDVGVEVGGSGGCL 63

Query: 91 QEQ 93
          +E+
Sbjct: 64 EER 66


>AK001248-1|BAA91580.1|  183|Homo sapiens protein ( Homo sapiens
          cDNA FLJ10386 fis, clone NT2RM2002142, weakly similar
          to GASTRULATION SPECIFIC PROTEIN G12. ).
          Length = 183

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 31 KQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTELLWSGGDS 90
          K S+ N M +F+  VN MD+TV+VPS L ++P     DP     + ND+  E+  SGG  
Sbjct: 11 KHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLA---DP----GLDNDVGVEVGGSGGCL 63

Query: 91 QEQ 93
          +E+
Sbjct: 64 EER 66


>AJ272057-1|CAB89113.1|  183|Homo sapiens hypothetical protein
          protein.
          Length = 183

 Score = 41.5 bits (93), Expect = 0.001
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 31 KQSILNDMEKFVKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTELLWSGGDS 90
          K S+ N M +F+  VN MD+TV+VPS L ++P     DP     + ND+  E+  SGG  
Sbjct: 11 KHSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLA---DP----GLDNDVGVEVGGSGGCL 63

Query: 91 QEQ 93
          +E+
Sbjct: 64 EER 66


>L42452-1|AAC42011.1|  406|Homo sapiens pyruvate dehydrogenase
          kinase protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 42 VKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTE 82
          V++ NTM E  L+P  L+N P  G    + M S L  L+ E
Sbjct: 55 VRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYE 95


>BC015948-1|AAH15948.1|  406|Homo sapiens pyruvate dehydrogenase
          kinase, isozyme 3 protein.
          Length = 406

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 42 VKMVNTMDETVLVPSRLMNLPQEGDDDPFSMFSMLNDLKTE 82
          V++ NTM E  L+P  L+N P  G    + M S L  L+ E
Sbjct: 55 VRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYE 95


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.312    0.127    0.344 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,450,773
Number of Sequences: 224733
Number of extensions: 471394
Number of successful extensions: 761
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 754
Number of HSP's gapped (non-prelim): 7
length of query: 168
length of database: 73,234,838
effective HSP length: 85
effective length of query: 83
effective length of database: 54,132,533
effective search space: 4493000239
effective search space used: 4493000239
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 62 (29.1 bits)