BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002676-TA|BGIBMGA002676-PA|undefined
(103 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 26 0.081
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 0.57
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 0.57
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 0.57
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 0.57
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 0.57
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 0.75
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 0.75
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 22 1.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 1.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 1.3
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 22 1.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 22 1.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 1.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 22 1.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 1.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 1.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 1.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 1.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 1.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 1.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 1.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 1.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 1.7
AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-lik... 22 1.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 3.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 3.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 3.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 3.0
AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein. 20 5.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 7.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 19 9.3
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 26.2 bits (55), Expect = 0.081
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + ENE K Y A S +S+ +
Sbjct: 164 EREEIKNVLTKINKIKEHDTVLVVNIEKSENESKKY--ATSSNSLRN 208
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 0.57
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + NE K Y A S +S+ +
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKY--ATSSNSLRN 219
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 0.57
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + NE K Y A S +S+ +
Sbjct: 180 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKY--ATSSNSLRN 224
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 0.57
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + NE K Y A S +S+ +
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIEKSGNESKKY--ATSSNSLRN 219
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 0.57
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVEDPDF 93
E + + NVLT+++ EH ++ + NE K Y +++ DF
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHDF 224
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 0.57
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + NE K Y A S +S+ +
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKY--ATSSNSLRN 219
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.75
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ + NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKY--ATSSNSL 217
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.0 bits (47), Expect = 0.75
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ + NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIKEHDTVLVVNIEKSGNESKKY--ATSSNSL 217
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 22.2 bits (45), Expect = 1.3
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ NE K Y A S +S+ +
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSLRN 219
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 81 DAASDDSVEDPDFLGDNQNDS 101
D SD+S DPD L ++ +S
Sbjct: 1779 DVESDESESDPDQLTSSRTES 1799
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 81 DAASDDSVEDPDFLGDNQNDS 101
D SD+S DPD L ++ +S
Sbjct: 1775 DVESDESESDPDQLTSSRTES 1795
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 206
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 206
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 206
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 1.7
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSV 88
E + + NVLT+++ EH ++ NE K Y A S +S+
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIKKSGNESKKY--ATSSNSL 217
>AF134818-1|AAD40234.1| 130|Apis mellifera lambda crystallin-like
protein protein.
Length = 130
Score = 21.8 bits (44), Expect = 1.7
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 25 KNSVDNVDPTSSPIPAMSPE-TQTLINVLTEV 55
KNS+ +V T P+P E + + N L E+
Sbjct: 71 KNSIYDVSMTFGPVPKFEGEMAEKISNELNEM 102
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 3.0
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + E K Y A S +S+ +
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKY--ATSSNSLRN 208
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 3.0
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + E K Y A S +S+ +
Sbjct: 175 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKY--ATSSNSLRN 219
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.0 bits (42), Expect = 3.0
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVED 90
E + + NVLT+++ EH ++ + E K Y A S +S+ +
Sbjct: 164 EREEIKNVLTKINKIEEHDTVLVVNIEKSGKESKKY--ATSSNSLRN 208
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.0 bits (42), Expect = 3.0
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 13 TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLIN 50
T +PP + L+ +++ + P+ M + +IN
Sbjct: 536 TETPPSYNQLNYNENIERFFKSKPPVATMYGSDEEIIN 573
>AY352277-2|AAQ67419.1| 88|Apis mellifera EX4.8-5.8 protein.
Length = 88
Score = 20.2 bits (40), Expect = 5.3
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 71 TIENEMKSYYDAASDDSVEDPDF 93
T+EN + ++ ++DPDF
Sbjct: 3 TMENSNMTEFEENVSFDIDDPDF 25
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 19.8 bits (39), Expect = 7.0
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 54 EVDLDSEHLPDMIKTGDTIE 73
E+D+ L ++KT D ++
Sbjct: 97 EIDVSQAELQSLLKTADQLK 116
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 19.4 bits (38), Expect = 9.3
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 19 VSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDM 65
+S LS+ +SV+ + ++ I + P T T LT VD+ + + M
Sbjct: 610 LSPLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIETM 656
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.305 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,670
Number of Sequences: 429
Number of extensions: 1385
Number of successful extensions: 32
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of query: 103
length of database: 140,377
effective HSP length: 49
effective length of query: 54
effective length of database: 119,356
effective search space: 6445224
effective search space used: 6445224
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.7 bits)
S2: 38 (19.4 bits)
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