BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002676-TA|BGIBMGA002676-PA|undefined
(103 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c... 34 0.005
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 31 0.036
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 28 0.26
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 28 0.34
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 27 0.45
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo... 27 0.78
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr... 27 0.78
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc... 26 1.0
SPAC25B8.02 |||histone deacetylase complex subunit Sds3 |Schizos... 26 1.4
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 25 1.8
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 25 1.8
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 25 1.8
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 2.4
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual 25 2.4
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 24 4.2
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 24 4.2
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1... 24 4.2
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 24 4.2
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 24 4.2
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 24 5.5
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 24 5.5
SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family protein|Schizosacchar... 23 7.3
SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|c... 23 7.3
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb... 23 9.6
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 23 9.6
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 23 9.6
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 23 9.6
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 23 9.6
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ... 23 9.6
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 23 9.6
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 23 9.6
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 23 9.6
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo... 23 9.6
>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 801
Score = 33.9 bits (74), Expect = 0.005
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 25 KNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAAS 84
K ++ +++ S+PI S E +L N++T++DL+SE L +K + +++E+ Y
Sbjct: 151 KATLADLEQFSNPITRPSKEVDSLENIVTKLDLESEDLM-RLKKQEQLDDEIAKKYLLGQ 209
Query: 85 DDSVE 89
++ E
Sbjct: 210 QEAEE 214
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 31.1 bits (67), Expect = 0.036
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 30 NVDPTSSPIPAMSP--ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDS 87
N +SSP P SP + + N+L +LDS + P N++KSYY+ S S
Sbjct: 458 NTTISSSP-PLTSPVKTSANIPNLLPTSELDSSNAPHSQSAATHDLNDVKSYYNTRSSHS 516
Query: 88 V 88
V
Sbjct: 517 V 517
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/39 (28%), Positives = 21/39 (53%)
Query: 9 DTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQT 47
+T + SPP S + ++ N+ PTS + +P +Q+
Sbjct: 458 NTTISSSPPLTSPVKTSANIPNLLPTSELDSSNAPHSQS 496
>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 661
Score = 28.3 bits (60), Expect = 0.26
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 1 MKKGEPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSS 36
+K G P DT V+P S SL NS ++P+SS
Sbjct: 562 IKSGAPVLDTSSLVNPTLAKSASLNNS-SLLNPSSS 596
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 27.9 bits (59), Expect = 0.34
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 13 TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTI 72
TV PP + S+ KN D +S P P +S E L+ E DL+ +M+ +
Sbjct: 567 TVPPPSILSILRKNI--GKDISSIPAPVVSNEPCNLLQRCAE-DLE---YSNMLDKANEC 620
Query: 73 ENEMKSYYDAA 83
++++K +Y AA
Sbjct: 621 DDDIKIFYVAA 631
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 27.5 bits (58), Expect = 0.45
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 24 LKNSVDNVDPTSSPIPAMSPETQTLINVLTEVD--LDSEHLPDMIKTGDTI 72
LKN +DN+ P S P++ Q + ++ V+ L+SE++ + DT+
Sbjct: 1074 LKNELDNILPLSEVFPSLFHAIQATLEKVSNVNGKLNSENVAALRYADDTM 1124
>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 777
Score = 26.6 bits (56), Expect = 0.78
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 13 TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDM 65
+V PPWVS +S +VD T PI +S E+Q L ++L E+ E D+
Sbjct: 195 SVYPPWVSEMSNPIDTGSVDET-EPI-WVSTESQ-LSDMLKELQNSKEIAVDL 244
>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 0.78
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 29 DNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDA 82
D + SS SP T TL + TE DLD+ + +T T +N K DA
Sbjct: 270 DTLKADSSSNEYHSP-TNTLPSYHTEADLDNSSIASSNRTQHTEDNYNKDVSDA 322
>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1428
Score = 26.2 bits (55), Expect = 1.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 77 KSYYDAASDDSVEDPDFLGDNQNDSLS 103
KS+ +AA D +E+ D+ D Q+ S+S
Sbjct: 833 KSFGNAAGQDVIEEDDYETDQQDASIS 859
>SPAC25B8.02 |||histone deacetylase complex subunit Sds3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 267
Score = 25.8 bits (54), Expect = 1.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 8 FDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSP 43
F T T P +++NSV++V PTS+ SP
Sbjct: 174 FPTDETAVIPQSVKNAVRNSVNSVKPTSAEASLFSP 209
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 25.4 bits (53), Expect = 1.8
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 10 TPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLT 53
+P P SS S K +V SSP+PA S E ++L +T
Sbjct: 256 SPPANETPASSSSSAKARPVSVPDMSSPVPASSVEYESLKAAVT 299
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 28 VDNVDPTSSPIPAMSPETQTLINVLTEV---DLDS 59
V ++P + PIP ++P T+ +I D+DS
Sbjct: 30 VSPIEPAAKPIPLINPATEEIIGTCANASAKDVDS 64
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 25.4 bits (53), Expect = 1.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 64 DMIKTGDTIENEMKSYYDAASDDSVEDPD 92
D IK + +N M+ Y++A S DPD
Sbjct: 939 DEIKQKEEYKNRMRGYFNAISRFQAIDPD 967
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.0 bits (52), Expect = 2.4
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 15 SPPWVSSLSLKNSVDNVDPTSSP-IPAMSPETQT--LINVLTEVDLDSE 60
+P + +NS N +P+SS +PA +PET+ I+V +++ L S+
Sbjct: 303 APQQTTQQGTQNSA-NAEPSSSASVPAEAPETEAEQSIDVSSDIGLRSD 350
>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 25.0 bits (52), Expect = 2.4
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 5 EPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSP-IPAMSPETQTLINVLTEVDLDSEHLP 63
EPT V P + L L+N N+ PT+S +P T NV + L L
Sbjct: 329 EPTIHFVLYVPSPQIQPLWLENEDSNIIPTNSMLLPQWGSITTINFNVTEKKLLHDVDLK 388
Query: 64 DMIK 67
D +
Sbjct: 389 DYFR 392
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.2 bits (50), Expect = 4.2
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Query: 33 PTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTI-ENEMKSYYDAASDDSVEDP 91
P P P +SP T L + D+ S + + T + + ++KS +D+ + +E
Sbjct: 429 PPVQPKPKISPTTPRLSTLALADDMFSSTAKETVPTNEAVFTGDVKS-FDSQESNIIESE 487
Query: 92 DFLGDN 97
N
Sbjct: 488 PLSASN 493
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 72 IENEMKSYYDAASDDSVEDPDFLGDNQNDSLS 103
+ +KSYY + +S+++ +F G N +S
Sbjct: 657 VNTHVKSYYGHCNVESIKNVNFYGQNDEYVMS 688
>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 221
Score = 24.2 bits (50), Expect = 4.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 14 VSPPWVSSLSLKNSVDNVD 32
VS W + LSLKNS N D
Sbjct: 202 VSMVWTAYLSLKNSSPNAD 220
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 502
Score = 24.2 bits (50), Expect = 4.2
Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 23 SLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDA 82
S + ++++PT+ IP E L+NV DS L ++ G++ ++++ +
Sbjct: 9 SKRQKKESLNPTTIEIP----EKFPLVNVQFRASDDSNELASLLVPGNSSVRQLEALLNQ 64
Query: 83 ASDDSVEDP 91
++S +DP
Sbjct: 65 LLENS-DDP 72
>SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1462
Score = 24.2 bits (50), Expect = 4.2
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 55 VDLDSEHLPD-MIKTGDTIENEMKSYYDAASDD 86
+++D E +PD +IKT +T N + YY S+D
Sbjct: 1408 IEVDPE-IPDHLIKTWNTTWNNLFIYYPELSND 1439
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 23.8 bits (49), Expect = 5.5
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 70 DTIENEMKSYYDAASDDSVEDPDFLGDN-QND 100
D E E+ + +DA+ D +E +GD QND
Sbjct: 350 DEDEEELLAIFDASDDSEIEAYLSIGDTLQND 381
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 23.8 bits (49), Expect = 5.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)
Query: 7 TFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIP 39
T DT TVS S+ SL +S+ N P S+P P
Sbjct: 153 TSDTSSTVS----STPSLNHSLQNSMPPSTPTP 181
>SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 244
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 6 PTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIP 39
PT +TV P S +V+ PT+ PIP
Sbjct: 135 PTIFEGKTVISPSSSGTDHSEAVEYTVPTAPPIP 168
>SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 489
Score = 23.4 bits (48), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 36 SPIPAMSPETQTLINVLTEVDLDSEHLP 63
S I + P T T +N T +LD + LP
Sbjct: 456 SYIDGVMPSTDTYMNEKTSDELDKKSLP 483
>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 323
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 64 DMIKTGDTIENEMKSYYDAASDD 86
DM D ++NEM S +DA ++
Sbjct: 121 DMNSRFDAMQNEMNSRFDAVQNE 143
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 32 DPTSSPIPAMSPETQTLINVLTEVDLDSEHL 62
D T+ P +S E T+ +++ +V+ D +HL
Sbjct: 625 DETAKGTP-ISIEKDTVFDIIKQVETDPDHL 654
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 19 VSSLSLKNSVDNVDPTSSPI 38
V S+ K+S+D DP + PI
Sbjct: 16 VKSIESKDSIDQCDPLTWPI 35
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 23.0 bits (47), Expect = 9.6
Identities = 14/62 (22%), Positives = 30/62 (48%)
Query: 10 TPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTG 69
T T S VSS +L +S + +++ IP++S + ++ + L S ++ +
Sbjct: 122 TSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSST 181
Query: 70 DT 71
+T
Sbjct: 182 NT 183
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 23.0 bits (47), Expect = 9.6
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 5 EPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPE 44
EP T T+ P +L ++ + +P ++ P++SPE
Sbjct: 395 EPLSTTTPTLIEPIQETLMTQSPIIECEPFNTVKPSVSPE 434
>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 622
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 9 DTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMS 42
D PR ++ +SS+ +N + + P S P+ S
Sbjct: 169 DGPRVLALRAISSVDEENRKERLSPDSDPVETES 202
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 23.0 bits (47), Expect = 9.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 13 TVSPPWVSSLSLKNSVDN 30
TV PW+ +L LK V+N
Sbjct: 1302 TVLLPWLQNLELKMDVEN 1319
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 23.0 bits (47), Expect = 9.6
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 44 ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKS 78
+T LINVL + + + PD+ T+E E S
Sbjct: 582 KTLDLINVLASIKVSDGNYPDLNVDIKTLEPEYTS 616
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 20 SSLSLKNSVDNVDPTS-SPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKS 78
S+ S +S N+ T +P P +SP + + + D ++P +I ++ + + S
Sbjct: 277 STGSTDSSGSNIANTLIAPTPTISPPSANTVGNPSPADTPGFNVPSLISDDPSVSSSLSS 336
>SPBC800.09 |sum2||G2/M transition checkpoint protein
Sum2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 4 GEPTFDTPRTVSP----PWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLI 49
G P+ P +P P +++S S+ ++ PT+ IP P + I
Sbjct: 204 GMPSNQKPPNFAPGMPAPGPTAVSASPSLQSMPPTNGVIPGAQPSIEASI 253
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.305 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,444
Number of Sequences: 5004
Number of extensions: 22342
Number of successful extensions: 62
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 34
length of query: 103
length of database: 2,362,478
effective HSP length: 63
effective length of query: 40
effective length of database: 2,047,226
effective search space: 81889040
effective search space used: 81889040
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 47 (23.0 bits)
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