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Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002676-TA|BGIBMGA002676-PA|undefined
         (103 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|c...    34   0.005
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces...    31   0.036
SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|ch...    28   0.26 
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei...    28   0.34 
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch...    27   0.45 
SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6 |Schizosaccharo...    27   0.78 
SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr...    27   0.78 
SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyc...    26   1.0  
SPAC25B8.02 |||histone deacetylase complex subunit Sds3 |Schizos...    26   1.4  
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce...    25   1.8  
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo...    25   1.8  
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo...    25   1.8  
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy...    25   2.4  
SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual     25   2.4  
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo...    24   4.2  
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha...    24   4.2  
SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr 1...    24   4.2  
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c...    24   4.2  
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom...    24   4.2  
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|...    24   5.5  
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl...    24   5.5  
SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family protein|Schizosacchar...    23   7.3  
SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|c...    23   7.3  
SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces pomb...    23   9.6  
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ...    23   9.6  
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom...    23   9.6  
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos...    23   9.6  
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch...    23   9.6  
SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr ...    23   9.6  
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch...    23   9.6  
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom...    23   9.6  
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ...    23   9.6  
SPBC800.09 |sum2||G2/M transition checkpoint protein Sum2|Schizo...    23   9.6  

>SPBC1685.14c |||Vid27 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 801

 Score = 33.9 bits (74), Expect = 0.005
 Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 25  KNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAAS 84
           K ++ +++  S+PI   S E  +L N++T++DL+SE L   +K  + +++E+   Y    
Sbjct: 151 KATLADLEQFSNPITRPSKEVDSLENIVTKLDLESEDLM-RLKKQEQLDDEIAKKYLLGQ 209

Query: 85  DDSVE 89
            ++ E
Sbjct: 210 QEAEE 214


>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 637

 Score = 31.1 bits (67), Expect = 0.036
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 30  NVDPTSSPIPAMSP--ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDS 87
           N   +SSP P  SP   +  + N+L   +LDS + P          N++KSYY+  S  S
Sbjct: 458 NTTISSSP-PLTSPVKTSANIPNLLPTSELDSSNAPHSQSAATHDLNDVKSYYNTRSSHS 516

Query: 88  V 88
           V
Sbjct: 517 V 517



 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)

Query: 9   DTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQT 47
           +T  + SPP  S +    ++ N+ PTS    + +P +Q+
Sbjct: 458 NTTISSSPPLTSPVKTSANIPNLLPTSELDSSNAPHSQS 496


>SPBC56F2.08c |||RNA-binding protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 661

 Score = 28.3 bits (60), Expect = 0.26
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 1   MKKGEPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSS 36
           +K G P  DT   V+P    S SL NS   ++P+SS
Sbjct: 562 IKSGAPVLDTSSLVNPTLAKSASLNNS-SLLNPSSS 596


>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 945

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 13  TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTI 72
           TV PP + S+  KN     D +S P P +S E   L+    E DL+     +M+   +  
Sbjct: 567 TVPPPSILSILRKNI--GKDISSIPAPVVSNEPCNLLQRCAE-DLE---YSNMLDKANEC 620

Query: 73  ENEMKSYYDAA 83
           ++++K +Y AA
Sbjct: 621 DDDIKIFYVAA 631


>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
            homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2609

 Score = 27.5 bits (58), Expect = 0.45
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 24   LKNSVDNVDPTSSPIPAMSPETQTLINVLTEVD--LDSEHLPDMIKTGDTI 72
            LKN +DN+ P S   P++    Q  +  ++ V+  L+SE++  +    DT+
Sbjct: 1074 LKNELDNILPLSEVFPSLFHAIQATLEKVSNVNGKLNSENVAALRYADDTM 1124


>SPAC1F3.01 |rrp6|SPAC3H8.11|exosome subunit Rrp6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 777

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)

Query: 13  TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDM 65
           +V PPWVS +S      +VD T  PI  +S E+Q L ++L E+    E   D+
Sbjct: 195 SVYPPWVSEMSNPIDTGSVDET-EPI-WVSTESQ-LSDMLKELQNSKEIAVDL 244


>SPBC19C2.10 |||BAR adaptor protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 501

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 29  DNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDA 82
           D +   SS     SP T TL +  TE DLD+  +    +T  T +N  K   DA
Sbjct: 270 DTLKADSSSNEYHSP-TNTLPSYHTEADLDNSSIASSNRTQHTEDNYNKDVSDA 322


>SPBC15C4.05 |||ATP-dependent RNA/DNA helicase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 1428

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 77  KSYYDAASDDSVEDPDFLGDNQNDSLS 103
           KS+ +AA  D +E+ D+  D Q+ S+S
Sbjct: 833 KSFGNAAGQDVIEEDDYETDQQDASIS 859


>SPAC25B8.02 |||histone deacetylase complex subunit Sds3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 267

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 8   FDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSP 43
           F T  T   P     +++NSV++V PTS+     SP
Sbjct: 174 FPTDETAVIPQSVKNAVRNSVNSVKPTSAEASLFSP 209


>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 522

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)

Query: 10  TPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLT 53
           +P     P  SS S K    +V   SSP+PA S E ++L   +T
Sbjct: 256 SPPANETPASSSSSAKARPVSVPDMSSPVPASSVEYESLKAAVT 299


>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
          |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 500

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 28 VDNVDPTSSPIPAMSPETQTLINVLTEV---DLDS 59
          V  ++P + PIP ++P T+ +I         D+DS
Sbjct: 30 VSPIEPAAKPIPLINPATEEIIGTCANASAKDVDS 64


>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1183

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/29 (37%), Positives = 16/29 (55%)

Query: 64  DMIKTGDTIENEMKSYYDAASDDSVEDPD 92
           D IK  +  +N M+ Y++A S     DPD
Sbjct: 939 DEIKQKEEYKNRMRGYFNAISRFQAIDPD 967


>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 620

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 4/49 (8%)

Query: 15  SPPWVSSLSLKNSVDNVDPTSSP-IPAMSPETQT--LINVLTEVDLDSE 60
           +P   +    +NS  N +P+SS  +PA +PET+    I+V +++ L S+
Sbjct: 303 APQQTTQQGTQNSA-NAEPSSSASVPAEAPETEAEQSIDVSSDIGLRSD 350


>SPAC1F12.09 |gpi17||pig-S|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 554

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 5   EPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSP-IPAMSPETQTLINVLTEVDLDSEHLP 63
           EPT      V  P +  L L+N   N+ PT+S  +P     T    NV  +  L    L 
Sbjct: 329 EPTIHFVLYVPSPQIQPLWLENEDSNIIPTNSMLLPQWGSITTINFNVTEKKLLHDVDLK 388

Query: 64  DMIK 67
           D  +
Sbjct: 389 DYFR 392


>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
           Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 650

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 33  PTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTI-ENEMKSYYDAASDDSVEDP 91
           P   P P +SP T  L  +    D+ S    + + T + +   ++KS +D+   + +E  
Sbjct: 429 PPVQPKPKISPTTPRLSTLALADDMFSSTAKETVPTNEAVFTGDVKS-FDSQESNIIESE 487

Query: 92  DFLGDN 97
                N
Sbjct: 488 PLSASN 493


>SPBC609.03 |||WD repeat protein, human IQWD1
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 809

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)

Query: 72  IENEMKSYYDAASDDSVEDPDFLGDNQNDSLS 103
           +   +KSYY   + +S+++ +F G N    +S
Sbjct: 657 VNTHVKSYYGHCNVESIKNVNFYGQNDEYVMS 688


>SPAC4G9.14 |||Mvp17/PMP22 family|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 221

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/19 (57%), Positives = 12/19 (63%)

Query: 14  VSPPWVSSLSLKNSVDNVD 32
           VS  W + LSLKNS  N D
Sbjct: 202 VSMVWTAYLSLKNSSPNAD 220


>SPCC18.05c |||notchless-like protein|Schizosaccharomyces
          pombe|chr 3|||Manual
          Length = 502

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 5/69 (7%)

Query: 23 SLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDA 82
          S +   ++++PT+  IP    E   L+NV      DS  L  ++  G++   ++++  + 
Sbjct: 9  SKRQKKESLNPTTIEIP----EKFPLVNVQFRASDDSNELASLLVPGNSSVRQLEALLNQ 64

Query: 83 ASDDSVEDP 91
            ++S +DP
Sbjct: 65 LLENS-DDP 72


>SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1462

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 55   VDLDSEHLPD-MIKTGDTIENEMKSYYDAASDD 86
            +++D E +PD +IKT +T  N +  YY   S+D
Sbjct: 1408 IEVDPE-IPDHLIKTWNTTWNNLFIYYPELSND 1439


>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
           role|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)

Query: 70  DTIENEMKSYYDAASDDSVEDPDFLGDN-QND 100
           D  E E+ + +DA+ D  +E    +GD  QND
Sbjct: 350 DEDEEELLAIFDASDDSEIEAYLSIGDTLQND 381


>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
           subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 709

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 4/33 (12%)

Query: 7   TFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIP 39
           T DT  TVS    S+ SL +S+ N  P S+P P
Sbjct: 153 TSDTSSTVS----STPSLNHSLQNSMPPSTPTP 181


>SPAC14C4.01c ||SPAC19D5.08c|DUF1770 family
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 244

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 6   PTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIP 39
           PT    +TV  P  S      +V+   PT+ PIP
Sbjct: 135 PTIFEGKTVISPSSSGTDHSEAVEYTVPTAPPIP 168


>SPAC6F6.04c |||membrane transporter |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 489

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 36  SPIPAMSPETQTLINVLTEVDLDSEHLP 63
           S I  + P T T +N  T  +LD + LP
Sbjct: 456 SYIDGVMPSTDTYMNEKTSDELDKKSLP 483


>SPCC569.01c |||DUF1773 family protein 5|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 323

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 64  DMIKTGDTIENEMKSYYDAASDD 86
           DM    D ++NEM S +DA  ++
Sbjct: 121 DMNSRFDAMQNEMNSRFDAVQNE 143


>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 726

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 32  DPTSSPIPAMSPETQTLINVLTEVDLDSEHL 62
           D T+   P +S E  T+ +++ +V+ D +HL
Sbjct: 625 DETAKGTP-ISIEKDTVFDIIKQVETDPDHL 654


>SPAPB1A11.01 ||SPAPB24D3.11|membrane
          transporter|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 495

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 19 VSSLSLKNSVDNVDPTSSPI 38
          V S+  K+S+D  DP + PI
Sbjct: 16 VKSIESKDSIDQCDPLTWPI 35


>SPAC2E1P3.05c |||fungal cellulose binding domain
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 197

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/62 (22%), Positives = 30/62 (48%)

Query: 10  TPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTG 69
           T  T S   VSS +L +S  +   +++ IP++S    + ++  +   L S     ++ + 
Sbjct: 122 TSTTSSSSLVSSTTLTSSSPSAVSSTTSIPSISSTISSSVSTSSFTSLSSSGFSTVLSST 181

Query: 70  DT 71
           +T
Sbjct: 182 NT 183


>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1316

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)

Query: 5   EPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPE 44
           EP   T  T+  P   +L  ++ +   +P ++  P++SPE
Sbjct: 395 EPLSTTTPTLIEPIQETLMTQSPIIECEPFNTVKPSVSPE 434


>SPBC27.03 |meu25||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 622

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 9   DTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMS 42
           D PR ++   +SS+  +N  + + P S P+   S
Sbjct: 169 DGPRVLALRAISSVDEENRKERLSPDSDPVETES 202


>SPBP19A11.04c |mor2|cps12|morphogenesis protein
            Mor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2196

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 13   TVSPPWVSSLSLKNSVDN 30
            TV  PW+ +L LK  V+N
Sbjct: 1302 TVLLPWLQNLELKMDVEN 1319


>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 762

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 44  ETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKS 78
           +T  LINVL  + +   + PD+     T+E E  S
Sbjct: 582 KTLDLINVLASIKVSDGNYPDLNVDIKTLEPEYTS 616


>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 681

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 20  SSLSLKNSVDNVDPTS-SPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKS 78
           S+ S  +S  N+  T  +P P +SP +   +   +  D    ++P +I    ++ + + S
Sbjct: 277 STGSTDSSGSNIANTLIAPTPTISPPSANTVGNPSPADTPGFNVPSLISDDPSVSSSLSS 336


>SPBC800.09 |sum2||G2/M transition checkpoint protein
           Sum2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 426

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 4/50 (8%)

Query: 4   GEPTFDTPRTVSP----PWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLI 49
           G P+   P   +P    P  +++S   S+ ++ PT+  IP   P  +  I
Sbjct: 204 GMPSNQKPPNFAPGMPAPGPTAVSASPSLQSMPPTNGVIPGAQPSIEASI 253


  Database: spombe
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.305    0.126    0.354 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,444
Number of Sequences: 5004
Number of extensions: 22342
Number of successful extensions: 62
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 35
Number of HSP's gapped (non-prelim): 34
length of query: 103
length of database: 2,362,478
effective HSP length: 63
effective length of query: 40
effective length of database: 2,047,226
effective search space: 81889040
effective search space used: 81889040
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 47 (23.0 bits)

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