Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002676-TA|BGIBMGA002676-PA|undefined
(103 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0330 - 16816497-16819952 30 0.30
02_02_0548 - 11403442-11404205,11404520-11404811,11404917-114050... 30 0.30
10_08_0333 - 16850267-16851802 29 0.69
12_01_0672 + 5731288-5731356,5732032-5732117,5732634-5732724,573... 28 1.2
01_06_0058 - 26056334-26056630,26057063-26057365,26057748-260578... 28 1.6
01_03_0259 - 14312197-14312259,14312384-14312456,14312651-143127... 28 1.6
11_04_0403 + 17298498-17298713,17298799-17299696,17299874-173005... 27 2.1
09_04_0164 + 15265878-15268701,15268782-15269200 27 2.1
01_03_0085 + 12310675-12311354,12311475-12311579,12311755-123118... 27 2.1
01_01_0406 + 3059996-3060047,3060804-3060867,3060979-3061054,306... 27 2.1
08_02_1196 - 25190040-25190065,25190224-25190302,25190554-251906... 27 3.7
07_03_0167 - 14649782-14649864,14649954-14650078,14650357-146504... 27 3.7
02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,329... 27 3.7
01_06_0716 - 31425189-31426460 26 4.9
11_06_0106 + 20181197-20181535,20188754-20188868,20188929-201892... 26 6.4
08_02_1340 - 26256768-26256999,26258105-26258774,26259273-262605... 26 6.4
08_01_1082 - 11073874-11073988,11074072-11074133,11074217-110745... 26 6.4
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 26 6.4
02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784 26 6.4
02_05_0546 + 29889861-29890182,29891057-29892798 26 6.4
11_01_0798 + 7026509-7029272,7031573-7031994 25 8.5
09_04_0180 + 15367737-15367755,15368874-15369739 25 8.5
07_03_0481 - 18572206-18574314,18574591-18575185,18575304-185753... 25 8.5
06_03_0654 + 23173253-23173812,23174365-23175262 25 8.5
05_01_0120 - 828834-831143 25 8.5
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 25 8.5
>10_08_0330 - 16816497-16819952
Length = 1151
Score = 30.3 bits (65), Expect = 0.30
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 23 SLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIE 73
SLKN ++++D +S+ + P + I+ L+ ++L + HL I TG+ ++
Sbjct: 999 SLKN-LESLDLSSNELSGAIPPSLAGISTLSSLNLSNNHLSGKISTGNQLQ 1048
>02_02_0548 -
11403442-11404205,11404520-11404811,11404917-11405016,
11405049-11405458
Length = 521
Score = 30.3 bits (65), Expect = 0.30
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 72 IENEMKSYYDAASDDSVEDPDFLGDNQN 99
+ +EM++Y + SDD DPD+ D+ +
Sbjct: 62 VSDEMENYNELVSDDEANDPDYTPDDDD 89
>10_08_0333 - 16850267-16851802
Length = 511
Score = 29.1 bits (62), Expect = 0.69
Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 23 SLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIE 73
SLKN ++++D +S+ I P + I+ L+ ++L HL I TG+ ++
Sbjct: 359 SLKN-LESLDLSSNEISGAIPPSLAGISTLSTLNLSYNHLSGKIPTGNQLQ 408
>12_01_0672 +
5731288-5731356,5732032-5732117,5732634-5732724,
5732886-5732935,5733339-5733408,5733508-5733617,
5733943-5734463,5734856-5734949,5735095-5735225,
5735241-5736274,5736383-5736457,5736615-5737104,
5737375-5738009,5738166-5738378
Length = 1222
Score = 28.3 bits (60), Expect = 1.2
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 39 PAMSPETQ-TLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDS 87
P SPE + T+I VD DSE + T D+I ++ S+ DA DDS
Sbjct: 928 PPNSPERKNTIIEGGCIVDTDSEPSKKLQSTSDSIVRDISSHKDA--DDS 975
>01_06_0058 -
26056334-26056630,26057063-26057365,26057748-26057891,
26057947-26058702,26058844-26059088,26059177-26060079,
26060163-26060225,26060537-26061025,26061211-26061291,
26061801-26061956,26062371-26062416
Length = 1160
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 17 PWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTI-ENE 75
P S++L+ ++ +P P + +T +V + L +EH D T +++
Sbjct: 204 PCAESIALECPEGSIPLLLNPTPCL----ETTGDVPSTSSLQTEHAVDHQARSCTFNDDD 259
Query: 76 MKSYYDAASDDSVEDPDFLGDNQNDSL 102
M S+ D SDD LGD+++D +
Sbjct: 260 MDSFMDDDSDDEYYMFAGLGDDEDDEM 286
>01_03_0259 -
14312197-14312259,14312384-14312456,14312651-14312754,
14313073-14313192,14313278-14313364,14313925-14314023,
14314110-14314203,14314298-14314368,14315258-14316040
Length = 497
Score = 27.9 bits (59), Expect = 1.6
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Query: 1 MKKGEPTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIP-AMSPETQTLINVLTEVDL-D 58
+ + P+ TP SP SL L+ V+ VD + P P SP T + + + + D
Sbjct: 125 LSRSNPSCFTPSPSSPQHPRSLGLEQYVELVDSVAHPPPLPPSPSTADAPSRVEVIAVDD 184
Query: 59 SEHLPDMIKTGDTIENEMK 77
+E D + + E E+K
Sbjct: 185 AEERKDDEEAREEEEEEVK 203
>11_04_0403 +
17298498-17298713,17298799-17299696,17299874-17300592,
17301714-17301806,17301884-17302051
Length = 697
Score = 27.5 bits (58), Expect = 2.1
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 1 MKKGEPTFDTPRTVSP-PWVSSLSLKNSVDNV 31
+K G F T ++P WV L+LKNS++ +
Sbjct: 220 VKTGRTPFSTYANITPNQWVDFLTLKNSLEEI 251
>09_04_0164 + 15265878-15268701,15268782-15269200
Length = 1080
Score = 27.5 bits (58), Expect = 2.1
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 20 SSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSY 79
SSL S++ +D + + + P+T T LT ++L L ++ T N +
Sbjct: 604 SSLDGLESIERLDVSDNSLTGEIPQTLTKCTTLTYLNLSYNDLAGVVPTAGVFANFTSTS 663
Query: 80 Y 80
Y
Sbjct: 664 Y 664
>01_03_0085 +
12310675-12311354,12311475-12311579,12311755-12311877,
12312206-12312376,12312472-12312601,12313003-12313058,
12313602-12313704,12313705-12313914,12314122-12314253
Length = 569
Score = 27.5 bits (58), Expect = 2.1
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 18 WVSSL-SLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENE 75
W+ + + + S + VDPT P+ + L+ L VD DSE P M + +E++
Sbjct: 462 WLKMMVASRRSEEVVDPTIETRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESD 520
>01_01_0406 +
3059996-3060047,3060804-3060867,3060979-3061054,
3061142-3061243,3061327-3061542,3061615-3061695,
3062219-3062287,3062789-3062961,3063098-3063182,
3063290-3063491,3063577-3063646,3063956-3064025,
3064138-3064227,3064321-3064389,3064566-3064664,
3064814-3064924
Length = 542
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 60 EHLPDMIKTGDTIENEMKSYYDAASDDSVEDPDF 93
E PD G+ +++S+Y A+ +DPDF
Sbjct: 180 EQFPDWEDVGNQAVGDLQSFYKASKKRFDDDPDF 213
>08_02_1196 -
25190040-25190065,25190224-25190302,25190554-25190646,
25190761-25190892,25191578-25191721,25192941-25193150,
25194915-25195406
Length = 391
Score = 26.6 bits (56), Expect = 3.7
Identities = 9/28 (32%), Positives = 21/28 (75%)
Query: 43 PETQTLINVLTEVDLDSEHLPDMIKTGD 70
P +T+++ +++VDLD+ ++ + +TGD
Sbjct: 346 PHRETMLSNISQVDLDNINVNEFPRTGD 373
>07_03_0167 -
14649782-14649864,14649954-14650078,14650357-14650400,
14650873-14651003,14652469-14652559,14653335-14653445,
14653623-14653774,14653863-14654067,14654436-14654764,
14654850-14655309
Length = 576
Score = 26.6 bits (56), Expect = 3.7
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 59 SEHLPDMIKTGDTIENEMKSYYDAASDDSVEDPDFLGDNQNDSL 102
S+ +P I T +++M S+ D SDD LGD ++D +
Sbjct: 118 SQFVPFHILTSHCTKDDMDSFMDDDSDDEYYMFAGLGDGEDDEM 161
>02_01_0459 + 3298780-3298788,3298900-3299037,3299174-3299207,
3299528-3299531,3299814-3299949,3300034-3300090,
3301689-3301786,3301876-3301947,3302056-3302228,
3302552-3302698,3303113-3303336,3305300-3305306,
3305634-3305800,3306033-3306068,3306787-3307004,
3307115-3307172,3307761-3307842,3308045-3308207,
3308594-3308598,3308700-3308885,3308969-3309548,
3309642-3309774,3309880-3309948,3310184-3310395,
3310654-3310891,3311228-3311386,3311501-3311926,
3312010-3312447,3312593-3312712,3312784-3313266,
3313471-3314009,3314178-3314667,3314836-3314904,
3315735-3315839,3315940-3316158,3316254-3316508,
3316602-3316651,3317175-3317284,3317372-3317454,
3317560-3317772,3317870-3318040
Length = 2391
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 41 MSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYDAASDDSVEDPDFLGDNQN 99
+SP T +++N+L E+ E +P M+ T I + + +D S V + +G N N
Sbjct: 997 LSPSTSSVMNLLAEIYSQPEMVPKMLGT-TAIGGD--NEFDLNSVTLVAGEEKMGSNDN 1052
>01_06_0716 - 31425189-31426460
Length = 423
Score = 26.2 bits (55), Expect = 4.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 27 SVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKT--GDTI 72
++ ++D + + I P+T TL++ +T ++L S L I T GD I
Sbjct: 201 NLTHLDLSGNRITGAIPDTLTLLSAITHLNLSSNDLNGNIPTSIGDLI 248
>11_06_0106 +
20181197-20181535,20188754-20188868,20188929-20189200,
20189278-20189416,20189534-20189842,20190263-20190579,
20190907-20191080
Length = 554
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 16 PPWVSSLSLKNSVD-NVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMI 66
P W+ L+ +D +++ + P+P P ++++ LT +DL + L +I
Sbjct: 127 PNWLGQLTSLVILDLSMNNITGPLPGHLPSQISMLSNLTRLDLSNNILDGLI 178
>08_02_1340 -
26256768-26256999,26258105-26258774,26259273-26260555,
26262403-26263499
Length = 1093
Score = 25.8 bits (54), Expect = 6.4
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 12 RTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDT 71
+T P V S L+ + P+ A + E TLI V+ + D IK D+
Sbjct: 786 KTSEPLEVDSNHLEQISQSKGDVHGPLQAPTREENTLIASGHGVERTVSAVLDSIKPEDS 845
Query: 72 IENEMKSY-YDAASDDSVED 90
IE +M + + A++D +D
Sbjct: 846 IEAKMDTLSAEVATEDKGKD 865
>08_01_1082 -
11073874-11073988,11074072-11074133,11074217-11074505,
11074652-11074743,11074840-11074966,11075075-11075156,
11075611-11075887,11075993-11076158,11076874-11077202
Length = 512
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 16 PPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHL 62
PP + S ++DN + P PE+ +N+ TE ++ H+
Sbjct: 466 PPMTYTSSPSTTIDNTGLSKDSTP---PESSAAVNISTEKNMSELHI 509
>04_04_0605 +
26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 25.8 bits (54), Expect = 6.4
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 22 LSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLPDMIKTGDTIENEMKSYYD 81
L + N DN + ++ + E T++N + D++S H+ I + +++N YYD
Sbjct: 126 LGILNVTDNGNADNN---IFAVELDTMLNPEFQ-DMNSNHIGVDINSMKSVQNHSAGYYD 181
Query: 82 AAS 84
A+
Sbjct: 182 EAT 184
>02_05_1315 + 35675285-35676688,35676816-35677255,35677341-35678784
Length = 1095
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 13 TVSPPWVSSLSLKNSVDNVDPTSSPIPAM 41
TV+ + S+LSL S D+ DP S+ + A+
Sbjct: 96 TVTSAFASALSLPVSTDHADPLSALVNAL 124
>02_05_0546 + 29889861-29890182,29891057-29892798
Length = 687
Score = 25.8 bits (54), Expect = 6.4
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 11 PRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMS-PETQTLINVLT---EVDLDSEHLPDMI 66
P + P + ++ + V P SSP+ +++ P T+ ++ + D P+++
Sbjct: 45 PAVAALPATAPVTSASLVTLKPPGSSPVKSVNNPSVVTMPHMAPSHLKSDKGVNGPPNLV 104
Query: 67 KTGDTIENEMKSYYDAAS 84
+TG T N KS++D +
Sbjct: 105 RTGATYGNLNKSFHDTCA 122
>11_01_0798 + 7026509-7029272,7031573-7031994
Length = 1061
Score = 25.4 bits (53), Expect = 8.5
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 17 PWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHL 62
P ++ L L+N++ + D ++P PAM+ +Q+ + L +++L S L
Sbjct: 442 PRLNLLELQNNLLSGDVPANPSPAMAAASQS--SQLAQLNLSSNQL 485
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 6 PTFDTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHLP 63
P TP P L + + DP + P P + PE T NV +++L+ E P
Sbjct: 79 PPIPTPAPSPIPRPPELDPEPKAET-DPEADPKPGLDPEPDT--NVEPDLELEPEPPP 133
>07_03_0481 -
18572206-18574314,18574591-18575185,18575304-18575371,
18577344-18577458,18578179-18578333,18578673-18580621,
18580691-18581372,18581550-18581621,18582558-18583199,
18583301-18583402,18585011-18585100
Length = 2192
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 27 SVDNVDPTSSPIPAMSPETQTLINVL-TEVDLDSEHLPDMIKTGDTIENEMKSY 79
SV+ T + IP +T+ ++ TEV EH PD G E E+K +
Sbjct: 432 SVNGEYETVTDIPEEKNDTKHPVSKADTEVHTKQEHTPDSKLHGKIQETELKEH 485
>06_03_0654 + 23173253-23173812,23174365-23175262
Length = 485
Score = 25.4 bits (53), Expect = 8.5
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 53 TEVDLDSEHLPDMIKTGDTIENEMKSYYDAA 83
T+ DL S H ++KT +E + +S Y A
Sbjct: 284 TQKDLGSSHPEQILKTNIALEKQARSIYTNA 314
>05_01_0120 - 828834-831143
Length = 769
Score = 25.4 bits (53), Expect = 8.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Query: 13 TVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQT 47
+ SPP++S SL + SS P++SP T +
Sbjct: 498 STSPPFLSPSSLSSDSSISSKYSSDSPSLSPSTSS 532
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 9 DTPRTVSPPWVSSLSLKNSVDNVDPTSSPIPAMSPETQTLINVLTEVDLDSEHL 62
+ P PP S SV V P P PA + +Q+L N ++ + HL
Sbjct: 524 NAPPMYPPPPYGYASYYPSVTPVQPPPPPPPAGADPSQSLANAPGQLTVHHLHL 577
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.305 0.126 0.354
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,390,148
Number of Sequences: 37544
Number of extensions: 133722
Number of successful extensions: 293
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 277
Number of HSP's gapped (non-prelim): 28
length of query: 103
length of database: 14,793,348
effective HSP length: 71
effective length of query: 32
effective length of database: 12,127,724
effective search space: 388087168
effective search space used: 388087168
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -