Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002675-TA|BGIBMGA002675-PA|IPR002048|Calcium-binding
EF-hand, IPR001611|Leucine-rich repeat
(703 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 38 3e-04
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 27 0.39
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 25 2.1
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 25 2.1
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 24 3.7
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 23 6.4
AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phospha... 23 8.5
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 37.9 bits (84), Expect = 3e-04
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 6/105 (5%)
Query: 61 INILDLSHNNITKL-NHELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVH-LNLANNRIK 118
+ ILDL +N+I ++ ++ L + TL+LS N ++ + L N +++ L L+ N I
Sbjct: 361 LQILDLRNNSIDRIESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRLTLSGNAIA 420
Query: 119 E---LAMSHLPASVSSLDLTNNLLRDVPSDLGHLTSLEHLELEGN 160
LA + + + LDL+ N L VP L L L+ L+L N
Sbjct: 421 SIDPLAFRNC-SDLKELDLSGNELTSVPDALRDLALLKTLDLGEN 464
Score = 36.7 bits (81), Expect = 6e-04
Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 64 LDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNL-NKFLHNAKKLVHLNLANNRIKELAM 122
LDLS N +T + L L + TLDL N I N N N +L L L N I L+
Sbjct: 436 LDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGNLSR 495
Query: 123 SHL--PASVSSLDLTNNLLRDVPS-DLGHLTSLEHLELEGN 160
L ++ L+L N ++ V LE + L+GN
Sbjct: 496 GMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGN 536
Score = 36.7 bits (81), Expect = 6e-04
Identities = 19/84 (22%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Query: 60 NINILDLSHNNITKLN-HELDRLTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIK 118
N+ IL+L+ N + + + +R + + L N + ++N + L+ LNL+ N I+
Sbjct: 503 NLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLLLLNLSENHIE 562
Query: 119 ELAMSHLPASVSSLDLTNNLLRDV 142
+ +P ++ LD+ N + +
Sbjct: 563 WFDYAFIPGNLKWLDIHGNFIESL 586
Score = 34.7 bits (76), Expect = 0.003
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Query: 63 ILDLSHNNITKLNHELDRLTEVVTLDLSTNGIQNL-NKFLHNAKKLVHLNLANNRIKELA 121
+L+LS N+I ++ + LD+ N I++L N + K+ L+ ++NRI EL+
Sbjct: 553 LLNLSENHIEWFDYAFIP-GNLKWLDIHGNFIESLGNYYKIRDSKVKTLDASHNRITELS 611
Query: 122 MSHLPASVSSLDLTNNLLRDV-PSDLGHLTSLEHLELEGNPLD 163
+P SV L + NN + V P+ +L +++ N ++
Sbjct: 612 PLSVPDSVELLFINNNYINLVRPNTFTDKVNLTRVDMYANMIE 654
Score = 33.5 bits (73), Expect = 0.006
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 60 NINILDLSHNNITKL--NHELDRLTEVVTLDLSTNGIQNL-NKFLHNAKKLVHLNLANNR 116
+I ILDLS N IT+L N L L ++ L L N I + L L N + N
Sbjct: 213 DIRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNS 272
Query: 117 IKELAMSHLPAS--VSSLDLTNNLLRDVPSDL-GHLTSLEHLELEGNPL 162
+ L ++ + + L N LRD+P + L L L L GN L
Sbjct: 273 LDSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRL 321
Score = 27.9 bits (59), Expect = 0.30
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 61 INILDLSHNNITKLNHELDR-LTEVVTLDLSTNGIQNLNKFLHNAKKLVHLNLANNRIKE 119
+N L LS N I ++ R +++ LDLS N + ++ L + L L+L NRI
Sbjct: 409 LNRLTLSGNAIASIDPLAFRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRIS- 467
Query: 120 LAMSHLPASVSSLDLTNNLLRDVPSDLGHLT 150
+ S +LD LR + +D+G+L+
Sbjct: 468 ---NFYNGSFRNLDQLTG-LRLIGNDIGNLS 494
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 27.5 bits (58), Expect = 0.39
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 614 NDDENPRLNGTNDSDTSQPLINGDQNTDSDFLSPSREYVPVYSPDMGRVRIKMTETPKPK 673
N++ N NG ND+ N + N D + Y + PD G V + P P
Sbjct: 244 NNNNNNNNNGANDNGNGNGASNNNNNGDMFCHTGLGHY--GHHPDPGEVDLPPETQPTPP 301
Query: 674 TPVLV 678
+ LV
Sbjct: 302 SATLV 306
Score = 23.4 bits (48), Expect = 6.4
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 542 NGDVANGINHAENNDPKTESPRDTNQNRSSSKDNN 576
N + +N N+ NN+ D +S +NN
Sbjct: 234 NTNASNNNNNNNNNNNNNNGANDNGNGNGASNNNN 268
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 25.0 bits (52), Expect = 2.1
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 525 GKYELVPTHELHQKKSENGDVANGINHAENNDPKTESPRDTNQ--NRSSSKDNNLAKTPS 582
GK++ V + + GD N +N P E ++ ++ SSS DN KT
Sbjct: 4 GKFQFVSQNNFEEFAKVLGD-QNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFK 62
Query: 583 QQETSFESAPASPDSR 598
E+ P+ PD +
Sbjct: 63 MNVPFEETLPSLPDRK 78
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 25.0 bits (52), Expect = 2.1
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 525 GKYELVPTHELHQKKSENGDVANGINHAENNDPKTESPRDTNQ--NRSSSKDNNLAKTPS 582
GK++ V + + GD N +N P E ++ ++ SSS DN KT
Sbjct: 6 GKFQFVSQNNFEEFAKVLGD-QNLVNTVLQPRPSFELSKNGDEWTFTSSSGDNTYTKTFK 64
Query: 583 QQETSFESAPASPDSR 598
E+ P+ PD +
Sbjct: 65 MNVPFEETLPSLPDRK 80
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 24.2 bits (50), Expect = 3.7
Identities = 14/83 (16%), Positives = 32/83 (38%)
Query: 546 ANGINHAENNDPKTESPRDTNQNRSSSKDNNLAKTPSQQETSFESAPASPDSRKDNNSLS 605
AN N ND + + ++ +K N + ++Q + ++ D++++ N +
Sbjct: 452 ANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQN 511
Query: 606 SEDLFVPLNDDENPRLNGTNDSD 628
+D N N +D
Sbjct: 512 DNKRNGNRQNDNQNNQNDNNRND 534
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 23.4 bits (48), Expect = 6.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 542 NGDVANGINHAENNDPK 558
N + +NGI+H E+ PK
Sbjct: 45 NFETSNGISHQESGQPK 61
>AF023666-1|AAC14552.1| 363|Apis mellifera sn-glycerol-3-phosphate
dehydrogenase protein.
Length = 363
Score = 23.0 bits (47), Expect = 8.5
Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 429 VTAVSEVL-GQRPADKDETPTPHKTGTYVCIAIIVMLLVSLIGFAIIKG 476
+ A+ +V+ + AD PH+ +C A+ + + IG ++IKG
Sbjct: 74 IIAIPDVVEAAKDADILTFVVPHQFIKRICSALFGKIKPTAIGLSLIKG 122
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.311 0.130 0.371
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,467
Number of Sequences: 429
Number of extensions: 8529
Number of successful extensions: 29
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 18
Number of HSP's gapped (non-prelim): 14
length of query: 703
length of database: 140,377
effective HSP length: 63
effective length of query: 640
effective length of database: 113,350
effective search space: 72544000
effective search space used: 72544000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 47 (23.0 bits)
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