GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002674-TA|BGIBMGA002674-PA|IPR001670|Iron-containing
alcohol dehydrogenase
         (271 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   4.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   7.4  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    21   7.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   7.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.4  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 1    MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRV 34
            MT   + S  P+K V D     GIN +  D+  V
Sbjct: 1331 MTVDELRSRDPIKIVADLQKLKGINNEYEDQTEV 1364


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 1    MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRV 34
            MT   + S  P+K V D     GIN +  D+  V
Sbjct: 1331 MTVDELRSRDPIKIVADLQKLKGINNEYEDQTEV 1364


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 169 ALESFTAIPFTERGPAPANPALRPAYQGSNPISDVWARF 207
           A  + T   ++   P P++P++   +QG +  S  W  +
Sbjct: 114 AAATATEYKYSAAAPGPSDPSVSSCHQGFS--SSTWCNY 150


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)

Query: 142 LALIDPLHTLTVPEKVSNYSGF 163
           L  + P+H  T  EK+S   GF
Sbjct: 285 LLTVIPIHVWTSKEKISFLRGF 306


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 74  YYSDPDAEFLDYVNAPVGKGK 94
           Y S P+ E  D+ +AP   GK
Sbjct: 132 YQSQPNPEPADFADAPDAIGK 152


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)

Query: 74  YYSDPDAEFLDYVNAPVGKGK 94
           Y S P+ E  D+ +AP   GK
Sbjct: 132 YQSQPNPEPADFADAPDAIGK 152


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 185 PANPALRPAYQGSNPISDV 203
           P N   +PA  G  PI D+
Sbjct: 112 PLNSCSQPAAPGGQPIPDI 130


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 185 PANPALRPAYQGSNPISDV 203
           P N   +PA  G  PI D+
Sbjct: 171 PLNSCSQPAAPGGQPIPDI 189


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 185 PANPALRPAYQGSNPISDV 203
           P N   +PA  G  PI D+
Sbjct: 112 PLNSCSQPAAPGGQPIPDI 130


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 185 PANPALRPAYQGSNPISDV 203
           P N   +PA  G  PI D+
Sbjct: 171 PLNSCSQPAAPGGQPIPDI 189


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,532
Number of Sequences: 317
Number of extensions: 2415
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 10
length of query: 271
length of database: 114,650
effective HSP length: 56
effective length of query: 215
effective length of database: 96,898
effective search space: 20833070
effective search space used: 20833070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 42 (21.0 bits)