GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002674-TA|BGIBMGA002674-PA|IPR001670|Iron-containing
alcohol dehydrogenase
         (271 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        28   0.33 
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   7.0  

>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query: 60  GGGSVMDTCKAANLYYSDPDAEFLDYVNAPVGKG 93
           GGG    +C+   LY S  D  + D++ AP G G
Sbjct: 332 GGGERHKSCQIQTLYVSFRDLNWQDWIIAPDGFG 365


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 67  TCKAANLYYSDPDAEFLDYVNAPVGKG 93
           +C+   LY S  D ++ +++ AP G G
Sbjct: 335 SCRIQQLYVSFKDLQWHEWIIAPEGYG 361


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,588
Number of Sequences: 2123
Number of extensions: 11113
Number of successful extensions: 10
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 8
Number of HSP's gapped (non-prelim): 2
length of query: 271
length of database: 516,269
effective HSP length: 63
effective length of query: 208
effective length of database: 382,520
effective search space: 79564160
effective search space used: 79564160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)