GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002674-TA|BGIBMGA002674-PA|IPR001670|Iron-containing
alcohol dehydrogenase
         (271 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8...   351   2e-96
AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens ...   351   2e-96
BC064634-1|AAH64634.1|  255|Homo sapiens ADHFE1 protein protein.      283   5e-76
BC047492-1|AAH47492.1|  293|Homo sapiens ADHFE1 protein protein.      192   8e-49

>AY033237-1|AAK44223.1|  467|Homo sapiens alcohol dehydrogenase 8
           protein.
          Length = 467

 Score =  351 bits (863), Expect = 2e-96
 Identities = 154/270 (57%), Positives = 199/270 (73%)

Query: 1   MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDGSFKDAIHFAKEGNFDSFVAIG 60
           MTD N++ L P++  +DSL +NGI + VYD VRVEPTD SF +AI FA++G FD++VA+G
Sbjct: 79  MTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVG 138

Query: 61  GGSVMDTCKAANLYYSDPDAEFLDYVNAPVGKGKAVNIQVKPMIAIPXXXXXXXXXXXXX 120
           GGS MDTCKAANLY S P ++FLDYV+AP+GKGK V++ +KP+IA+P             
Sbjct: 139 GGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVA 198

Query: 121 IFDYEEIHAKTGISHNALRPILALIDPLHTLTVPEKVSNYSGFDIFCHALESFTAIPFTE 180
           IFDYE +  K GI+  A++P L LIDPLHTL +P +V   SGFD+ CHALES+T +P+  
Sbjct: 199 IFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVLCHALESYTTLPYHL 258

Query: 181 RGPAPANPALRPAYQGSNPISDVWARFCLQTLQKYFVRSVNNSGDVEARSSMHLAATMAG 240
           R P P+NP  RPAYQGSNPISD+WA   L+ + KY  R+V N  D+EARS MHLA+  AG
Sbjct: 259 RSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRNPDDLEARSHMHLASAFAG 318

Query: 241 VGIGNAGVHLCHGLAYPIAGNVKSFVPEDY 270
           +G GNAGVHLCHG++YPI+G VK +  +DY
Sbjct: 319 IGFGNAGVHLCHGMSYPISGLVKMYKAKDY 348


>AK056992-1|BAB71335.1|  419|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32430 fis, clone SKMUS2001129, weakly similar to
           NAD-DEPENDENT METHANOL DEHYDROGENASE (EC 1.1.1.244). ).
          Length = 419

 Score =  351 bits (863), Expect = 2e-96
 Identities = 154/270 (57%), Positives = 199/270 (73%)

Query: 1   MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDGSFKDAIHFAKEGNFDSFVAIG 60
           MTD N++ L P++  +DSL +NGI + VYD VRVEPTD SF +AI FA++G FD++VA+G
Sbjct: 31  MTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVG 90

Query: 61  GGSVMDTCKAANLYYSDPDAEFLDYVNAPVGKGKAVNIQVKPMIAIPXXXXXXXXXXXXX 120
           GGS MDTCKAANLY S P ++FLDYV+AP+GKGK V++ +KP+IA+P             
Sbjct: 91  GGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVA 150

Query: 121 IFDYEEIHAKTGISHNALRPILALIDPLHTLTVPEKVSNYSGFDIFCHALESFTAIPFTE 180
           IFDYE +  K GI+  A++P L LIDPLHTL +P +V   SGFD+ CHALES+T +P+  
Sbjct: 151 IFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVLCHALESYTTLPYHL 210

Query: 181 RGPAPANPALRPAYQGSNPISDVWARFCLQTLQKYFVRSVNNSGDVEARSSMHLAATMAG 240
           R P P+NP  RPAYQGSNPISD+WA   L+ + KY  R+V N  D+EARS MHLA+  AG
Sbjct: 211 RSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVRNPDDLEARSHMHLASAFAG 270

Query: 241 VGIGNAGVHLCHGLAYPIAGNVKSFVPEDY 270
           +G GNAGVHLCHG++YPI+G VK +  +DY
Sbjct: 271 IGFGNAGVHLCHGMSYPISGLVKMYKAKDY 300


>BC064634-1|AAH64634.1|  255|Homo sapiens ADHFE1 protein protein.
          Length = 255

 Score =  283 bits (694), Expect = 5e-76
 Identities = 124/223 (55%), Positives = 163/223 (73%)

Query: 1   MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDGSFKDAIHFAKEGNFDSFVAIG 60
           MTD N++ L P++  +DSL +NGI + VYD VRVEPTD SF +AI FA++G FD++VA+G
Sbjct: 31  MTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVG 90

Query: 61  GGSVMDTCKAANLYYSDPDAEFLDYVNAPVGKGKAVNIQVKPMIAIPXXXXXXXXXXXXX 120
           GGS MDTCKAANLY S P ++FLDYV+AP+GKGK V++ +KP+IA+P             
Sbjct: 91  GGSTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVA 150

Query: 121 IFDYEEIHAKTGISHNALRPILALIDPLHTLTVPEKVSNYSGFDIFCHALESFTAIPFTE 180
           IFDYE +  K GI+  A++P L LIDPLHTL +P +V   SGFD+ CHALES+T +P+  
Sbjct: 151 IFDYEHLKVKIGITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVLCHALESYTTLPYHL 210

Query: 181 RGPAPANPALRPAYQGSNPISDVWARFCLQTLQKYFVRSVNNS 223
           R P P+NP  RPAYQGSNPISD+WA   L+ + KY  R+VN++
Sbjct: 211 RSPCPSNPITRPAYQGSNPISDIWAIHALRIVAKYLKRAVNST 253


>BC047492-1|AAH47492.1|  293|Homo sapiens ADHFE1 protein protein.
          Length = 293

 Score =  192 bits (469), Expect = 8e-49
 Identities = 86/156 (55%), Positives = 113/156 (72%), Gaps = 1/156 (0%)

Query: 1   MTDPNVASLSPMKAVLDSLTRNGINYKVYDKVRVEPTDGSFKDAIHFAKEGNFDSFVAIG 60
           MTD N++ L P++  +DSL +NGI + VYD VRVEPTD SF +AI FA++G FD++VA+G
Sbjct: 79  MTDKNLSKLPPVQVAMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVG 138

Query: 61  GGSVMDTCKAANLYYSDPDAEFLDYVNAPVGKGKAVNIQVKPMIAIPXXXXXXXXXXXXX 120
           GG  MDTCKAANLY S P ++FLDYV+AP+GKGK V++ +KP+IA+P             
Sbjct: 139 GGCTMDTCKAANLYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVA 198

Query: 121 IFDYEEIHAKTGISHNALRPILALIDPLHTLT-VPE 155
           IFDYE +  K GI+  A++P L LIDPLHT T +PE
Sbjct: 199 IFDYEHLKVKIGITSRAIKPTLGLIDPLHTSTCLPE 234


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,108,713
Number of Sequences: 224733
Number of extensions: 1470889
Number of successful extensions: 3010
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3006
Number of HSP's gapped (non-prelim): 4
length of query: 271
length of database: 73,234,838
effective HSP length: 89
effective length of query: 182
effective length of database: 53,233,601
effective search space: 9688515382
effective search space used: 9688515382
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)