GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002674-TA|BGIBMGA002674-PA|IPR001670|Iron-containing
alcohol dehydrogenase
         (271 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.54 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    24   1.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   8.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 10/16 (62%), Positives = 12/16 (75%)

Query: 72  NLYYSDPDAEFLDYVN 87
           NLYY+ P +E L YVN
Sbjct: 263 NLYYNSPSSENLYYVN 278


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%)

Query: 69  KAANLYYSDPDAEFLDYVNA---PVGKGKAVNIQ 99
           K  NLYYS   +  L+YVN      GK +A +IQ
Sbjct: 258 KTQNLYYSAMSSHNLNYVNTKQFTQGKFQANDIQ 291


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query: 72  NLYYSDPDAEFLDYVN 87
           NLYYS   +  L+YVN
Sbjct: 262 NLYYSALSSHNLNYVN 277


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.319    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,073
Number of Sequences: 429
Number of extensions: 3094
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 271
length of database: 140,377
effective HSP length: 57
effective length of query: 214
effective length of database: 115,924
effective search space: 24807736
effective search space used: 24807736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)