GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002673-TA|BGIBMGA002673-PA|IPR002110|Ankyrin,
IPR001452|Src homology-3
         (372 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   0.63 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.9  

>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 27.5 bits (58), Expect = 0.63
 Identities = 16/39 (41%), Positives = 19/39 (48%)

Query: 2   TALHLCAATDRTEPMKLLLKAGADSSVRDGSGRTPLQIA 40
           T LHL  + +    +K LL AGA     D  G TPL  A
Sbjct: 786 TGLHLAVSCNSEPIVKALLGAGAKLHYCDYRGNTPLHRA 824


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 5.9
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 16  MKLLLKAGADSS--VRDGSGRTPLQIARQLGHHGCQELLESVDKRDK 60
           M+L+   G + +  +R+ +GRTP  IA   GH+     L++  + ++
Sbjct: 571 MQLIESPGGEIACEMRNINGRTPSDIAELAGHYKIASALKNFSQMNE 617


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.131    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,907
Number of Sequences: 2123
Number of extensions: 9061
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 3
length of query: 372
length of database: 516,269
effective HSP length: 65
effective length of query: 307
effective length of database: 378,274
effective search space: 116130118
effective search space used: 116130118
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 49 (23.8 bits)