Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002672-TA|BGIBMGA002672-PA|undefined
(147 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 34 0.010
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 0.22
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 29 0.29
SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces pomb... 29 0.38
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 28 0.51
SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual 27 1.2
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 27 1.5
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 27 1.5
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 26 2.0
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 26 2.0
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 26 2.0
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 2.0
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 2.0
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.7
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 26 2.7
SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|ch... 26 2.7
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 26 2.7
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 26 2.7
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 25 3.6
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 25 4.7
SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces ... 25 6.2
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 24 8.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 24 8.2
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 33.9 bits (74), Expect = 0.010
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 40 KELSALMKTLMQNINNIVMFPVDSLLKGDLRGVKGDLKRPFDK---ASKDYESKYLKIEK 96
+++ L ++L + + + FP D L K D + D K+P S +YE K+
Sbjct: 539 RQIFDLERSLKPHTSLSISFPSDFLKKEDGLSLNNDFKKPACNNVTNSDEYEQLINKLTS 598
Query: 97 EKKSQAKEAGLIRSEVTSAEIADEMEKERRLFQLQMCEVNLQSI 140
+ S+ K+ IR I D + RRL + C +N + +
Sbjct: 599 LQASRKKDTLYIRKLYEELGIDDTVNSYRRLIAMS-CGINPEDL 641
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 29.5 bits (63), Expect = 0.22
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 77 KRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEK-ERRLFQLQMCEV 135
+R ++ + E++ LK EKE++ + +E L E +A+ E+EK E+ +LQ +
Sbjct: 83 QRAQEERIRQKEAERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQR 142
Query: 136 NLQSIFSKTKEK 147
+ K +EK
Sbjct: 143 RKEERDQKLREK 154
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.29
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 75 DLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKERR 126
+LK+ +K K + K LK+ KE++ Q +EA + + + + ++E R
Sbjct: 587 ELKKIREKEKKRDKKKQLKLAKEEERQRREAERLAEQAAQKALEAKRQEEAR 638
>SPAC1006.04c |mcp3|mug7|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 952
Score = 28.7 bits (61), Expect = 0.38
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 86 DYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKERRLFQLQMCEVNLQSIFSKTK 145
D+ +K LKI + +S ++AGL+ + + +E D + +E Q+Q +++++F K +
Sbjct: 393 DFRAKELKISRLSESLREKAGLLEFQSSVSEQRDLLYQE----QIQSSIKDMENVFRKNE 448
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 28.3 bits (60), Expect = 0.51
Identities = 32/148 (21%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 3 DNEMYLSRTLERLAGNALSKDSEP---DIGAAFFKFAVVTKELSALMKTLMQNINNIVMF 59
+NE + L++LA LSKD +P + F +V + +A+M L +N +
Sbjct: 377 ENEHGIKGKLKQLAEIKLSKDGKPFENEFNIKSFNRNLVKR--AAVMAKLQRNQLEEEL- 433
Query: 60 PVDSLLKGDLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIAD 119
+ K ++G K + + P ++A D E K ++EK + + E L E +
Sbjct: 434 KAKGIYKPTIQGEKEEEEDPLERARNDAE-KIRQLEKASGNASDEGELNDEEEVISSSNT 492
Query: 120 EMEKERRLFQLQMCEVNLQSIFSKTKEK 147
K + ++ + +V +++ ++ K +
Sbjct: 493 PSTKAKTTNKVIISDVIIEATQAEPKRR 520
>SPBC25B2.10 |||Usp |Schizosaccharomyces pombe|chr 2|||Manual
Length = 307
Score = 27.1 bits (57), Expect = 1.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 62 DSLLKGDLRGVK-GDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAE 116
+S G GV G+L RP + SKD + + + +K S + +RS +S E
Sbjct: 3 ESAPAGSKEGVSFGNLPRPEPRTSKDQQKLSISTDVKKPSHSAPVTPVRSARSSME 58
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 26.6 bits (56), Expect = 1.5
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 81 DKASKDYESKYLKIEKEKKSQAKEAGL--IRSEVTSAEIADEMEKER 125
D++ + S +LK K +K +AK AGL +R E +S E +DE E R
Sbjct: 127 DESERSGPSSFLK--KPEKEEAKPAGLKFLRGE-SSEESSDEEEGRR 170
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 26.6 bits (56), Expect = 1.5
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 57 VMFPVDSLLKGDLRGVKGDLKRP-FDKASKDYESKYLKIEKEKKSQAKE 104
V+ P ++ ++ GV+ KR + + KD + K EK +K +AK+
Sbjct: 407 VVAPAAPTVEAEVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKK 455
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 2.0
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 49 LMQNINNIVMFPVDSLLKG-DLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGL 107
L++ I +IV P D+ LKG D K L + +K K KEK S++ +
Sbjct: 59 LLERIKDIVQRPTDTQLKGQDSNHKKASLTETKTEKAKVKPKAKKKNSKEKISKSSKQDE 118
Query: 108 IRSEVTSAEIA 118
+++V ++
Sbjct: 119 HKTDVHKESVS 129
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 26.2 bits (55), Expect = 2.0
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 78 RPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKERRL 127
+ DK +KDYE+K + E K AK+ + S+ A + +++ E ++
Sbjct: 808 KKLDKNTKDYETKRWEAEVRAKQSAKKPAKL-SKDQQALVDAQLDAEAKI 856
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 26.2 bits (55), Expect = 2.0
Identities = 15/57 (26%), Positives = 23/57 (40%)
Query: 68 DLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKE 124
D +K KR FD KD+ S + + K + +I S + E+ M E
Sbjct: 868 DTGSIKIPAKRSFDTIDKDFRSSNIPFADKIKEDGGDKNVISSIHITTELPKSMPVE 924
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 26.2 bits (55), Expect = 2.0
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 33 FKFAVVTKELSALMKTLMQNINNIVMFPVDSLLKGDLR 70
F F ++ KE L + +NI +I +F +DSLL DLR
Sbjct: 555 FPFRLI-KEFLNLRLSCAENITSISLFTIDSLL-DDLR 590
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 2.0
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 36 AVVTKELSALMKTLMQNINNIVMFPVDSLLKGDLRGVKGDLKRPFDKASKDYESKYLKIE 95
+VV L ++ T +N I FPV + L+ ++ G+ L FD + Y++ + K+E
Sbjct: 1000 SVVNIPLLSIKTTAQRNCTLIGFFPVINRLESEILGIFESLLFHFD-SILGYQNYWKKVE 1058
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 25.8 bits (54), Expect = 2.7
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 69 LRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEA 105
+ G + DLK K KD E++ LK+E+ +KS + A
Sbjct: 226 MNGKEDDLK----KREKDLENRLLKVEEHEKSLNERA 258
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 85 KDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKERRL 127
K E K + E+E++ + +EA + E AE+ + ++E RL
Sbjct: 252 KMLEEKRAREEEEQRIREEEARIAEEEKRLAEVEEARKEEARL 294
>SPBP23A10.12 |||FRG1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 245
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 3 DNEMYLSRTLERLAGNALSKDSEPDIGAAF 32
DN SR LE +AG LS D + + AF
Sbjct: 194 DNPTIHSRQLESMAGRKLSTDEKKTLKKAF 223
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 25.8 bits (54), Expect = 2.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 91 YLKIEKEKKSQAKEAGLIRSEVTSAEIADE 120
YL EK + + +E+ RSE E+ADE
Sbjct: 891 YLHDEKTRDTLTRESPAFRSEEAVVEVADE 920
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 2.7
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 62 DSLLKGDLRGVKGDLKRPFDKASKDYESKYLKIEKEKK 99
+ L GDL GV D DK +Y+S+ +E ++K
Sbjct: 142 EELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEK 179
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 25.4 bits (53), Expect = 3.6
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 85 KDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEMEKERRL 127
KD+ + L +EK QA G+ S+ T AEI D M+ + L
Sbjct: 171 KDFYASMLD-RQEKIHQAAVEGVQNSKKTGAEIGDAMKGQDTL 212
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 25.0 bits (52), Expect = 4.7
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 76 LKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVT--SAEIADEMEKERR 126
L PFD ++D E+K +K EKE Q ++ +SE+T S ++ ++ +K R+
Sbjct: 81 LLEPFD--AEDNEAKKMKREKEILRQQRQKR--KSELTQLSQKVKEKFKKMRK 129
>SPAC13A11.02c |erg11||sterol 14-demethylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 495
Score = 24.6 bits (51), Expect = 6.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 81 DKASKDYESKYLKIEKEKKSQAKEAG 106
D+A K + YLKI K+++S + G
Sbjct: 230 DRAHKIMQKTYLKIIKDRRSSTENPG 255
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 24.2 bits (50), Expect = 8.2
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 63 SLLKGDLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAKEAGLIRSEVTSAEIADEME 122
S LKG + +K L+ ++ +++ + Y + + +A+EA RS SA++ E
Sbjct: 218 STLKG--QALKKTLEDTWNNLTEEEKKPYHEGLLAAREKAREARRRRSAQNSAKLEKEKA 275
Query: 123 KERR 126
KE++
Sbjct: 276 KEKQ 279
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.2 bits (50), Expect = 8.2
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 12/114 (10%)
Query: 45 LMKTLMQNINNIVMFPVDSLLKGDLRGVKGDLKRPFDKASKDYESKYLKIEKEKKSQAK- 103
L++ +Q N FP L +LR + + +D E LK E +K+ +K
Sbjct: 790 LLQANLQVYNEFRTFPWAKLFF-NLRPLLSSTQNDKQLKKRDAEIIELKYELKKQQNSKS 848
Query: 104 --EAGLIRSE--------VTSAEIADEMEKERRLFQLQMCEVNLQSIFSKTKEK 147
E L+ + + + E A ++KE L + Q N++ FS+TK++
Sbjct: 849 EVERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQERLANIEDSFSETKQQ 902
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.130 0.342
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,147
Number of Sequences: 5004
Number of extensions: 21349
Number of successful extensions: 87
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 68
Number of HSP's gapped (non-prelim): 29
length of query: 147
length of database: 2,362,478
effective HSP length: 67
effective length of query: 80
effective length of database: 2,027,210
effective search space: 162176800
effective search space used: 162176800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 50 (24.2 bits)
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