Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002671-TA|BGIBMGA002671-PA|IPR001247|Exoribonuclease
(277 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP103... 323 3e-87
UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36... 301 1e-80
UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;... 183 4e-45
UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core eudicotyledo... 182 1e-44
UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1 con... 177 3e-43
UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma j... 161 1e-38
UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;... 151 1e-35
UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1... 145 9e-34
UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;... 136 4e-31
UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7... 136 8e-31
UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;... 132 1e-29
UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum pe... 127 3e-28
UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4; envir... 124 3e-27
UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7 pro... 123 4e-27
UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;... 118 1e-25
UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 118 2e-25
UniRef50_UPI000051ACB2 Cluster: PREDICTED: similar to Exosome co... 116 9e-25
UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2... 115 2e-24
UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;... 114 2e-24
UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga maq... 110 4e-23
UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;... 108 1e-22
UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75 prot... 107 2e-22
UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;... 107 2e-22
UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:... 106 7e-22
UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1; ... 103 4e-21
UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2; Cryp... 103 4e-21
UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37... 103 7e-21
UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome co... 102 9e-21
UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome co... 102 1e-20
UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8... 101 3e-20
UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome co... 100 5e-20
UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1; ... 100 5e-20
UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,... 99 1e-19
UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|R... 97 3e-19
UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1; ... 97 3e-19
UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40... 97 3e-19
UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP4... 97 6e-19
UniRef50_A7DRS4 Cluster: 3' exoribonuclease; n=1; Candidatus Nit... 96 8e-19
UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;... 94 3e-18
UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of str... 93 5e-18
UniRef50_Q4PHF3 Cluster: Putative uncharacterized protein; n=1; ... 92 2e-17
UniRef50_Q10205 Cluster: Putative exosome complex exonuclease RR... 92 2e-17
UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein NCU003... 91 2e-17
UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1 con... 91 4e-17
UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75 prot... 89 9e-17
UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5; Plas... 87 5e-16
UniRef50_O74918 Cluster: Putative exosome complex exonuclease RR... 87 5e-16
UniRef50_Q4T221 Cluster: Chromosome undetermined SCAF10362, whol... 82 2e-14
UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3; ... 81 3e-14
UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;... 81 3e-14
UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p... 80 5e-14
UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1 con... 79 1e-13
UniRef50_A7TJI7 Cluster: Putative uncharacterized protein; n=1; ... 76 9e-13
UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative; ... 75 2e-12
UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologu... 73 6e-12
UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1... 72 1e-11
UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_A2ZJR3 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal ... 71 2e-11
UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45, puta... 69 2e-10
UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_A2F1F8 Cluster: Putative uncharacterized protein; n=1; ... 67 5e-10
UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative; ... 66 7e-10
UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_A2R0H9 Cluster: Contig An12c0290, complete genome; n=1;... 66 9e-10
UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1... 64 4e-09
UniRef50_Q12277 Cluster: Exosome complex exonuclease RRP42; n=5;... 63 6e-09
UniRef50_O60124 Cluster: Putative exosome complex exonuclease RR... 63 9e-09
UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative; ... 62 2e-08
UniRef50_Q0UMF7 Cluster: Putative uncharacterized protein; n=2; ... 60 6e-08
UniRef50_Q6C9I2 Cluster: Yarrowia lipolytica chromosome D of str... 59 1e-07
UniRef50_Q59LD7 Cluster: Potential exosome component Rrp42p; n=4... 58 2e-07
UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1 con... 58 3e-07
UniRef50_Q8X054 Cluster: Related to rRNA processing protein; n=4... 56 1e-06
UniRef50_Q5KFI0 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_Q0ULD2 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A5DMN2 Cluster: Putative uncharacterized protein; n=1; ... 53 9e-06
UniRef50_Q74ML0 Cluster: NEQ111; n=1; Nanoarchaeum equitans|Rep:... 51 3e-05
UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, wh... 51 4e-05
UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=... 50 5e-05
UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45, pu... 48 2e-04
UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein, put... 48 3e-04
UniRef50_A5ATT2 Cluster: Putative uncharacterized protein; n=1; ... 47 6e-04
UniRef50_A1C6Z1 Cluster: 3' exoribonuclease family protein (Rrp4... 46 8e-04
UniRef50_A6RAF2 Cluster: Putative uncharacterized protein; n=1; ... 46 0.001
UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella ve... 46 0.001
UniRef50_A1CMV2 Cluster: 3' exoribonuclease family protein; n=5;... 46 0.001
UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep: ... 45 0.002
UniRef50_A1DL29 Cluster: 3' exoribonuclease family protein; n=3;... 43 0.010
UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homol... 42 0.017
UniRef50_Q2H4W8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.017
UniRef50_UPI0000D569CA Cluster: PREDICTED: similar to CG8025-PA;... 42 0.023
UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1; ... 42 0.023
UniRef50_Q4QCR0 Cluster: RNasePH-like protein (Exosome associate... 41 0.030
UniRef50_Q7SEX2 Cluster: Putative uncharacterized protein NCU031... 41 0.030
UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;... 41 0.040
UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal ... 40 0.052
UniRef50_Q22RD5 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_A0D415 Cluster: Chromosome undetermined scaffold_37, wh... 40 0.069
UniRef50_UPI00015B4338 Cluster: PREDICTED: similar to exosomal 3... 40 0.091
UniRef50_A5C744 Cluster: Putative uncharacterized protein; n=1; ... 40 0.091
UniRef50_Q8PTT8 Cluster: Probable exosome complex exonuclease 1;... 40 0.091
UniRef50_A7RQ94 Cluster: Predicted protein; n=1; Nematostella ve... 39 0.16
UniRef50_UPI0000498B51 Cluster: exosome complex exonuclease; n=1... 38 0.21
UniRef50_A6SAV5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_A2RVK7 Cluster: At4g27490; n=7; Magnoliophyta|Rep: At4g... 38 0.37
UniRef50_Q9Z3R1 Cluster: L-2,4-diaminobutyrate decarboxylase; n=... 37 0.64
UniRef50_Q8G447 Cluster: PnpA; n=37; Bacteria|Rep: PnpA - Bifido... 36 0.85
UniRef50_Q5CWV7 Cluster: Archeo-eukaryotice exosomal RNAse PH; n... 36 0.85
UniRef50_Q74CS9 Cluster: Polyribonucleotide nucleotidyltransfera... 36 1.1
UniRef50_Q9RU11 Cluster: Ribonuclease PH; n=2; Deinococcus|Rep: ... 36 1.1
UniRef50_Q6P0I8 Cluster: Exosome complex exonuclease MTR3; n=1; ... 36 1.1
UniRef50_Q7QU07 Cluster: GLP_108_37210_36425; n=1; Giardia lambl... 36 1.5
UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2; Thermoplasmatales... 36 1.5
UniRef50_Q9ZAE1 Cluster: Polynucleotide phosphorylase; n=13; Bac... 35 2.0
UniRef50_Q0S208 Cluster: Polyribonucleotide nucleotidyltransfera... 35 2.0
UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein ECU06_... 35 2.0
UniRef50_Q5KWI5 Cluster: Ribonuclease PH; n=82; Bacteria|Rep: Ri... 35 2.0
UniRef50_Q4T603 Cluster: Chromosome undetermined SCAF9013, whole... 35 2.6
UniRef50_Q0J6M3 Cluster: Os08g0296900 protein; n=6; Oryza sativa... 35 2.6
UniRef50_Q4N9J5 Cluster: Long-chain fatty acid CoA ligase, putat... 35 2.6
UniRef50_A5DQA4 Cluster: Putative uncharacterized protein; n=1; ... 35 2.6
UniRef50_UPI00004991B7 Cluster: predicted protein; n=1; Entamoeb... 34 4.5
UniRef50_Q08VK2 Cluster: Ribonuclease PH; n=2; Proteobacteria|Re... 34 4.5
UniRef50_Q1HQF7 Cluster: Exosomal 3'-5' exoribonuclease complex ... 34 4.5
UniRef50_Q9UXC2 Cluster: Probable exosome complex exonuclease 1;... 33 6.0
UniRef50_Q7VIL0 Cluster: Polyribonucleotide nucleotidyltransfera... 33 7.9
UniRef50_A7I002 Cluster: Polyribonucleotide nucleotidyltransfera... 33 7.9
UniRef50_Q5C2I8 Cluster: SJCHGC06449 protein; n=1; Schistosoma j... 33 7.9
UniRef50_Q9Y223 Cluster: Bifunctional UDP-N-acetylglucosamine 2-... 33 7.9
>UniRef50_Q29QQ9 Cluster: IP10364p; n=8; Endopterygota|Rep: IP10364p
- Drosophila melanogaster (Fruit fly)
Length = 296
Score = 323 bits (793), Expect = 3e-87
Identities = 147/231 (63%), Positives = 185/231 (80%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
MA + LS EK +I+HGV++DFR DGRS DYRPM+LET +VS+ASGSARLRLANTDILV
Sbjct: 1 MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILV 60
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
G+KTEID P P P+ GK+EFFVDCSANATPEFEGRGG +LA + ++Q AY S AF+
Sbjct: 61 GVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFN 120
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
+ LC++ G+QCWKLY+DILILECGGNL DAVSLA KAALFNT++P V A ++D G DL
Sbjct: 121 YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDL 180
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGIT 231
+SD+PYD + + + PLLVT+CKIG+ +VDPSAEEE CS +S++V ++
Sbjct: 181 IISDNPYDCTRIGIETVPLLVTVCKIGDYVLVDPSAEEEVCSTVSMVVSVS 231
>UniRef50_Q15024 Cluster: Exosome complex exonuclease RRP42; n=36;
Eumetazoa|Rep: Exosome complex exonuclease RRP42 - Homo
sapiens (Human)
Length = 291
Score = 301 bits (739), Expect = 1e-80
Identities = 141/241 (58%), Positives = 183/241 (75%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
MA + LS EKV+IVHGVQED R DGR DYR +E+ETDVVS+ SGSAR++L +TDILV
Sbjct: 1 MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV 60
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
G+K E+ TPK +KP+ G +EFFVDCSA+ATPEFEGRGG++L + I+NT+ R +++ + D
Sbjct: 61 GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD 120
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
LK LCI + CW LYVD+L+LECGGNLFDA+S+A KAALFNTRIP V+ L + G+ D+
Sbjct: 121 LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDI 180
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCAD 240
+LSDDPYD L V + P +VTLCKIG + VVD + +EE+CS+ SL+V +T C
Sbjct: 181 ELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR 240
Query: 241 K 241
K
Sbjct: 241 K 241
>UniRef50_UPI0000E49695 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 336
Score = 183 bits (446), Expect = 4e-45
Identities = 85/159 (53%), Positives = 112/159 (70%)
Query: 11 KVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPK 70
K+ + ++D RSDGR+ + YR ELE VVS+ SGSARL+L+NT +LVG+K E+ P
Sbjct: 151 KMMLRDFTRDDLRSDGRTCLSYRNFELECGVVSNTSGSARLKLSNTQVLVGVKAEMGPPN 210
Query: 71 PDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGK 130
P P G IEFFVD SANA+P+F GRGG+ LA+ ISN + Y + + D K LC++ G+
Sbjct: 211 PLNPSRGGIEFFVDFSANASPKFAGRGGDELAAEISNMLGLVYKNKKMLDYKSLCVIAGQ 270
Query: 131 QCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVK 169
W LY DI++LECGGNL DA++LA KAAL+NTR L K
Sbjct: 271 CVWTLYADIVVLECGGNLLDAIALAVKAALYNTRYMLSK 309
>UniRef50_Q9SSE1 Cluster: MLP3.20 protein; n=5; core
eudicotyledons|Rep: MLP3.20 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 297
Score = 182 bits (442), Expect = 1e-44
Identities = 102/248 (41%), Positives = 144/248 (58%), Gaps = 22/248 (8%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS E+ FI G+ +D R+DGR + YRP+ +ET V+ A+GSAR+R+ TD++ +K E
Sbjct: 3 LSLGEQHFIKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVRIGGTDVIASVKAE 62
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQA------- 118
I P +PD GK+ F+DCS A P F GRGGE L+S ++ +QR ++
Sbjct: 63 IGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGLQSS 122
Query: 119 ---------FDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPL-- 167
+L L I EGK CW LY+D L++ GNL DA+ A KAAL NT IP
Sbjct: 123 IHVLVPGAGINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVN 182
Query: 168 VKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEES--CSVIS 225
V A + D ++ +SD+ Y +F D S P++VTL K+G +VD +AEEES S +S
Sbjct: 183 VSAEVADDEQPEIDISDEEY-LQF-DTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVS 240
Query: 226 LIVGITGN 233
+ V TG+
Sbjct: 241 ISVNRTGH 248
>UniRef50_Q2QT85 Cluster: 3' exoribonuclease family, domain 1
containing protein, expressed; n=2; Oryza sativa
(japonica cultivar-group)|Rep: 3' exoribonuclease
family, domain 1 containing protein, expressed - Oryza
sativa subsp. japonica (Rice)
Length = 284
Score = 177 bits (431), Expect = 3e-43
Identities = 94/245 (38%), Positives = 139/245 (56%), Gaps = 7/245 (2%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS EK FI G+ +D R+DGR + +R + +ET V+ A+GSAR+RL T+++ +K E
Sbjct: 4 LSEGEKHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQANGSARVRLGATEVIATVKAE 63
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAY-----HSSQAFD 120
+ P PD GK+ FVDCS A P FEGRG E ++ + +QR + A D
Sbjct: 64 LGKPSILHPDKGKVSIFVDCSPTAAPMFEGRGSEEFSAELCVALQRCLLGGKSGAGAAID 123
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L L +V+GK CW LY+D L++ GNL DA++ A K AL +T IP V L + +
Sbjct: 124 LSSLIVVDGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSDTGIPKVNVSLSATTDEEP 183
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEES--CSVISLIVGITGNSKSYC 238
+++ +F D S P++VTL K+G+ +VD ++EEES S +S+ V G +
Sbjct: 184 EVNVSDEEFLQFDTSSVPVIVTLTKVGKHYIVDATSEEESQMSSAVSVSVNRHGQIRGLT 243
Query: 239 ADKGA 243
GA
Sbjct: 244 KRGGA 248
>UniRef50_Q5DA97 Cluster: SJCHGC04772 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04772 protein - Schistosoma
japonicum (Blood fluke)
Length = 277
Score = 161 bits (392), Expect = 1e-38
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 7/230 (3%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
M +LLS E+ +++ G++ R DGR +YRP+E+ET+++SHA+GSA +R+ T I+
Sbjct: 1 MDTVLLSDLERFYLIQGIEVGCRMDGRGPSEYRPLEIETNILSHATGSASIRIGETFIVC 60
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
+K E+ P + + G+IE V+C AT +G LA + T+Q Y S+ +
Sbjct: 61 CVKMEVGKPSLTRLNEGRIEINVECYPTATYRCNEKGASELAERLKTTLQSTY-QSEFIN 119
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L LCI G+QCW +Y+D+LILE GNL DA SL KAAL N + L D
Sbjct: 120 LNSLCIQRGRQCWVIYIDLLILEGAGNLLDASSLVIKAALLNA--TQSNSFLSSVFRNDT 177
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSV--ISLIV 228
SD + + + PL VT+ KIG ++D + EEE+CS+ +SL++
Sbjct: 178 NTSDT--EIQNCNEDMLPLFVTVHKIGNAYIIDATKEEEACSLSRLSLVI 225
>UniRef50_O26778 Cluster: Probable exosome complex exonuclease 2;
n=2; Methanobacteriaceae|Rep: Probable exosome complex
exonuclease 2 - Methanobacterium thermoautotrophicum
Length = 271
Score = 151 bits (367), Expect = 1e-35
Identities = 86/220 (39%), Positives = 123/220 (55%), Gaps = 7/220 (3%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R DGRS ++R + +ET V+S A GS+R++L NT I+VG+K +I P PD P+MG I
Sbjct: 25 RIDGRSLHEFRDISIETGVISKAEGSSRVKLGNTQIIVGVKPQIGEPFPDTPEMGVILTN 84
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
+ A+P FE + + +S + R S+ DL++LCI+EG + W L++D+ I+
Sbjct: 85 SELLPMASPTFEPGPPDERSVELSRVVDRCIRESRMIDLEKLCIIEGSKVWMLFLDLHII 144
Query: 143 ECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVT 202
+ GNLFDA LAT AAL +TRIP A + DG V + P L V L+ T
Sbjct: 145 DYDGNLFDAAVLATVAALLDTRIP--AAEVEDGEVVINREKMQP-----LPVNRKALMCT 197
Query: 203 LCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKG 242
KIG + V+DPS EEE + +G+T KG
Sbjct: 198 FAKIGNEIVLDPSLEEEDILTARISIGVTEEGSICAMQKG 237
>UniRef50_UPI0000498B14 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 145 bits (352), Expect = 9e-34
Identities = 81/239 (33%), Positives = 126/239 (52%), Gaps = 9/239 (3%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS E FI G++ + R+DGR+NI +R ++ E V+ A+GS RL L T+++VG+K E
Sbjct: 4 LSQPEINFIKEGIKTNIRTDGRANIQFREIKCEKGVIDQANGSVRLCLGKTEVVVGVKCE 63
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ P P+ G+ V T R E + I +++ A L++LC
Sbjct: 64 LGEPSVLTPESGRYNVLVKQVGTMT----SRDVE-IEKMILVSLENAGKDM----LQELC 114
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD 185
+++GK CW +YVD++++E GN+ D LA +AAL NT IP+V + D V + + D
Sbjct: 115 VLKGKLCWIIYVDVVVVEDDGNVMDCTGLAVRAALLNTLIPIVNVISGDSDTVQVDIDKD 174
Query: 186 PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKGAS 244
FK S PL V+L + ++ + DPS EE C+ + IT N K KG +
Sbjct: 175 NVQFKKFKPESVPLCVSLIQFEKEFIADPSKVEEKCNGSEITTAITSNGKVCGIQKGGN 233
>UniRef50_Q8TGX5 Cluster: Probable exosome complex exonuclease 2;
n=9; Archaea|Rep: Probable exosome complex exonuclease 2
- Methanosarcina acetivorans
Length = 266
Score = 136 bits (330), Expect = 4e-31
Identities = 84/249 (33%), Positives = 133/249 (53%), Gaps = 17/249 (6%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
++++ +K +I + + + R DGR D+R ++LET+V+ A GSA++ L NT +LVG+K
Sbjct: 7 IIATLKKDYIYNLMIKGKRQDGRGFKDFRDLKLETNVIVKAEGSAKVTLGNTQVLVGVKL 66
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
+ TP PD D G I ++ + A+PEFE A ++ + R S A D+K+L
Sbjct: 67 QTGTPFPDSQDEGVIITNLELNPIASPEFEPGPPREEAIEMARVVDRGIRESGAIDIKKL 126
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
CI G+ W +++D+ +L GN+ DA LA AAL T +P N L +
Sbjct: 127 CITVGESVWIVFIDVHVLNDDGNIIDASCLAAIAALMTTMVP----------NEQQGLGE 176
Query: 185 D-PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEES-CSVISLIVGITGNSKSYCADKG 242
D P K + VG +T+ KIG K +VDPS +EE+ C IV + S + G
Sbjct: 177 DVPLAMKEMPVG-----ITIAKIGSKLMVDPSLDEEAVCETKLTIVSSSDGSVAGMQKMG 231
Query: 243 ASNITDVDI 251
S +T+ ++
Sbjct: 232 ISPLTEAEL 240
>UniRef50_O45424 Cluster: Putative uncharacterized protein exos-7;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein exos-7 - Caenorhabditis elegans
Length = 312
Score = 136 bits (328), Expect = 8e-31
Identities = 98/286 (34%), Positives = 151/286 (52%), Gaps = 28/286 (9%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLA-NTDILVGIKT 64
LS EK+F++ G + + R+DGRS D+R + LE V+S +GS R++L TD+L GIK
Sbjct: 5 LSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLAGIKL 64
Query: 65 EIDT--PKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD-- 120
E+++ + +K I F VD SANA+ +F G+GG+ A +S Q AY S+A D
Sbjct: 65 ELESYDAETEKEPKQPINFNVDFSANASSQFAGKGGDEYAEELSAAFQAAY--SKALDIM 122
Query: 121 --LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 178
L + + +G + WK+ VDI +L+ G++ DA+S+A AL + P DGG V
Sbjct: 123 PNLAKTQLADGYR-WKINVDISVLQWDGSVSDAISIAIIGALSDLEFPEGDVAPDDGGKV 181
Query: 179 DLQLS---------DDPYDFKF--LDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLI 227
+ L D+ LDV PLL+T+ KIG +VD + EEE C L+
Sbjct: 182 RIVLKRPKVAGNVRDENVQVAMWKLDVMRCPLLLTISKIGTANLVDCTPEEECCIRSQLL 241
Query: 228 VGITGNSKSYCADKGASNITDVDIKCSTISMNGPGSLAPKTLKNAI 273
VG+ AD +N + D+ C + G G L ++++ +
Sbjct: 242 VGLAA-----IADSSENNEPNYDVTC--VKQVGGGLLEMESIQEML 280
>UniRef50_Q8U0M0 Cluster: Probable exosome complex exonuclease 2;
n=8; Euryarchaeota|Rep: Probable exosome complex
exonuclease 2 - Pyrococcus furiosus
Length = 277
Score = 132 bits (318), Expect = 1e-29
Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 6/207 (2%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
+I++ ++E R D R DYRP+E+E V+ A GSA ++L NT +LVGIK + P PD
Sbjct: 14 YILNLLKEKKRIDDRGFEDYRPIEVEVGVIEKAEGSALVKLGNTQVLVGIKATLGEPFPD 73
Query: 73 KPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQC 132
P+MG + V+ A+P FE + A ++ + R S+A +L+++ I GK
Sbjct: 74 TPNMGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESRALNLEKMVIAPGKIV 133
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFL 192
+++D+ +L+ GNL DA+ + AAL N R+P V + G V++ +P L
Sbjct: 134 RVVFIDVHVLDHDGNLMDAIGIGAIAALLNARVPKV-LYNEETGEVEILEEKEP-----L 187
Query: 193 DVGSAPLLVTLCKIGEKCVVDPSAEEE 219
V P+ VT KIG VVDP+ EEE
Sbjct: 188 PVEKIPISVTFAKIGNYLVVDPTLEEE 214
>UniRef50_A1RXQ5 Cluster: 3' exoribonuclease; n=1; Thermofilum
pendens Hrk 5|Rep: 3' exoribonuclease - Thermofilum
pendens (strain Hrk 5)
Length = 272
Score = 127 bits (307), Expect = 3e-28
Identities = 86/277 (31%), Positives = 136/277 (49%), Gaps = 13/277 (4%)
Query: 2 AGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVG 61
A + S +K I+ + + R DGR YR + LE ++ A GSAR+ L +T ++ G
Sbjct: 4 ARTFVPSVKKEVILASLAKGERLDGRKADQYREIRLEKGIIGKADGSARVFLGSTQVIAG 63
Query: 62 IKTEIDTPKPDKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFD 120
+K I TP PD P+ G + S A+P FE G GE ++ + R + S++ D
Sbjct: 64 VKLAIGTPFPDAPNEGVQIVNAELSPVASPFFEPGPPGEE-DIELARVVDRGFRSAKVVD 122
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L +L I+ +CW LY+DI L+ GNL DA LA AL +T++P + + +
Sbjct: 123 LAKLSIIPSAKCWTLYIDIYPLDHDGNLVDAAGLAALLALLDTKLPRTS---VQENKIAV 179
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCAD 240
DP L + + + VT+ KIGE VVDP+ EEE + + GIT +
Sbjct: 180 LDEKDP-----LPINTLVVYVTVAKIGEYLVVDPTLEEELTADAKITFGITERGEICAIQ 234
Query: 241 KG--ASNITDVDIKCSTISMNGPGSLAPKTLKNAIHQ 275
K S D ++ +++ +L + +K A+ Q
Sbjct: 235 KSGEGSFRPDEVLRARDMALKASSTLF-EAIKKAVEQ 270
>UniRef50_Q64CA6 Cluster: TRNA nucleotidyltransferase; n=4;
environmental samples|Rep: TRNA nucleotidyltransferase -
uncultured archaeon GZfos24D9
Length = 260
Score = 124 bits (298), Expect = 3e-27
Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
++ K ++ +++ R+DGR +D+R + +E D++ A GS R+++ +T +LVG+K
Sbjct: 5 VIEDIRKDYVYDLIEKGKRADGRGFLDFRDIIVERDLIKKADGSTRVQIGDTVVLVGVKV 64
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
E P PD P+ G + + A+PEFE + ++ + R S+ DL++L
Sbjct: 65 EPGAPFPDTPNKGILMTNAELVPLASPEFESGPPNEDSIELARVVDRGIRGSETIDLEKL 124
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
CI EG++ W +++DI L+ GNL DA +L +L N IP + L G LQ+ D
Sbjct: 125 CIEEGEKVWMVFIDIHTLDNDGNLVDAAALGAITSLLNVTIPYERYGLT--GEDTLQIRD 182
Query: 185 DPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISL-IVGITGNSKSYCADKGA 243
P+ VT+ +IG +VDP+ EES + L ++ S S G+
Sbjct: 183 ------------TPVAVTVVEIGGNLLVDPNVYEESAATSKLTVISNADGSISGLQKSGS 230
Query: 244 SNITDVDI 251
+ +T+ I
Sbjct: 231 TGLTEEKI 238
>UniRef50_UPI0000E4A2CF Cluster: PREDICTED: similar to Exosc7
protein, partial; n=2; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to Exosc7 protein,
partial - Strongylocentrotus purpuratus
Length = 209
Score = 123 bits (297), Expect = 4e-27
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 1/148 (0%)
Query: 101 LASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAAL 160
+ S+ S + + ++Q D K LC++ G+ W LY DI++LECGGNL DA++LA KAAL
Sbjct: 22 VVSNTSGSARLKLSNTQMLDYKSLCVIAGQCVWTLYADIVVLECGGNLLDAIALAVKAAL 81
Query: 161 FNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEES 220
+NTRIPLV G D+ +S +P+DF LD + P+LVT+ +G +VD + EEE+
Sbjct: 82 YNTRIPLVTVHKDMDGTEDIDVSSNPHDFVTLDTKNLPVLVTVTMVGSGHIVDATLEEEA 141
Query: 221 CSVISLIVGITGNSK-SYCADKGASNIT 247
CS+ ++ + KG+ ++T
Sbjct: 142 CSMACIVAAVNKEGAIDGMVKKGSGSLT 169
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDIL 59
+D RSDGR+ + YR ELE VVS+ SGSARL+L+NT +L
Sbjct: 1 DDLRSDGRTCLSYRNFELECGVVSNTSGSARLKLSNTQML 40
>UniRef50_Q9UXC0 Cluster: Probable exosome complex exonuclease 2;
n=5; Sulfolobaceae|Rep: Probable exosome complex
exonuclease 2 - Sulfolobus solfataricus
Length = 275
Score = 118 bits (285), Expect = 1e-25
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 9/244 (3%)
Query: 10 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 69
+K IV ++ R DGR DYRP+ + D A GSA ++L T +L G K EID P
Sbjct: 15 KKESIVSLFEKGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKP 74
Query: 70 KPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEG 129
D P+ G + V+ A FE + A ++ + R+ S+A DL +L I G
Sbjct: 75 YEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPG 134
Query: 130 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDF 189
K W +++D+ +L+ GGN+ DA +LA+ AAL+NT++ V+ + + ++
Sbjct: 135 KSVWTVWLDVYVLDYGGNVLDACTLASVAALYNTKVYKVE---QHSNGISVNKNE---VV 188
Query: 190 KFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSK---SYCADKGASNI 246
L + + +++ K+ + VVDP +EES + T + K + KG+ ++
Sbjct: 189 GKLPLNYPVVTISVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGKGSMSL 248
Query: 247 TDVD 250
D+D
Sbjct: 249 QDID 252
>UniRef50_Q6L224 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 260
Score = 118 bits (283), Expect = 2e-25
Identities = 78/250 (31%), Positives = 125/250 (50%), Gaps = 18/250 (7%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
++S ++ I++ ++ R DGR D+R +++ + + ASGSA + L T ++ G+K
Sbjct: 8 VISGLKRDMILNSIKRGKRLDGRGLNDFRDIKIFENYIPKASGSAMVELGRTKVVAGVKI 67
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQ 123
E P PD PD G + ++ A P FE G GE A S + R S+ D+ +
Sbjct: 68 EEGEPFPDTPDQGVMALNIEMLPMAFPTFEAGPPGEE-AIEYSRVVDRGIRESKMIDVTR 126
Query: 124 LCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLS 183
L I G + W +++DI I+ GN+ DA ++A AAL N +P + GG
Sbjct: 127 LVIEPGTKVWMVFIDIDIINYAGNIIDASTIAAVAALRNAIVPASRI----GGE------ 176
Query: 184 DDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKG- 242
DFK L V + P+ VT+ KIG++ V+DP EEE S + + + + + KG
Sbjct: 177 ----DFK-LPVNANPVSVTMAKIGDELVIDPDLEEEQVSNGRITITMAEDDHIHAIQKGD 231
Query: 243 ASNITDVDIK 252
T DI+
Sbjct: 232 VGEFTMEDIR 241
>UniRef50_UPI000051ACB2 Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP42 (Ribosomal RNA-processing
protein 42) (Exosome component 7) (p8), partial; n=1;
Apis mellifera|Rep: PREDICTED: similar to Exosome
complex exonuclease RRP42 (Ribosomal RNA-processing
protein 42) (Exosome component 7) (p8), partial - Apis
mellifera
Length = 150
Score = 116 bits (278), Expect = 9e-25
Identities = 51/95 (53%), Positives = 68/95 (71%)
Query: 141 ILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLL 200
IL+CGGNLFDAV +A KAAL +T IP + +DGG D++LSDDPYD LD + P++
Sbjct: 1 ILQCGGNLFDAVGIAVKAALNSTEIPKITTATLDGGEPDIELSDDPYDCIQLDTSNYPII 60
Query: 201 VTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSK 235
VTLCKIG+ ++DP+ EEE CS S+I+ + N K
Sbjct: 61 VTLCKIGDNYIIDPTLEEEVCSASSIIMSVLPNGK 95
>UniRef50_Q2NEX4 Cluster: Putative exosome complex, exonuclease 2
subunit; n=1; Methanosphaera stadtmanae DSM 3091|Rep:
Putative exosome complex, exonuclease 2 subunit -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 265
Score = 115 bits (276), Expect = 2e-24
Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 8 STEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEID 67
S EKVF + + + R D R +YR + ++T+ + A GSA + + T ++VG+K ++
Sbjct: 9 SKEKVFDL--LNQGKRIDDRKFSEYRNISIKTNYIGKADGSAMVSIGCTTVIVGVKAQMT 66
Query: 68 TPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIV 127
TP + P+ G I + A A+ FE A IS + RA S DL +LC++
Sbjct: 67 TPFNNAPNSGIIITNTELLAIASRNFEYGPPNKFAVEISRVVDRAIRESPVVDLDKLCVI 126
Query: 128 EGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPY 187
EG + WKL++D+ I++ GN+ DA L AL T+IP +V+ ++ D
Sbjct: 127 EGSKSWKLHIDMYIVDFDGNIMDAACLGAICALLTTKIPTAT-------SVNGEIVIDEE 179
Query: 188 DFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCA 239
+ L + + +L T+ KI + +VDPS EE S+ G + S CA
Sbjct: 180 NLTPLPIKNRSILCTVVKINNQLIVDPSKIEEILMDSSVSFGFREDG-SLCA 230
>UniRef50_Q9YC05 Cluster: Probable exosome complex exonuclease 2;
n=4; Desulfurococcales|Rep: Probable exosome complex
exonuclease 2 - Aeropyrum pernix
Length = 276
Score = 114 bits (275), Expect = 2e-24
Identities = 67/221 (30%), Positives = 113/221 (51%), Gaps = 6/221 (2%)
Query: 33 RPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANATPE 92
R +++ET ++ A GSA ++L T ++ G+K + P D P+ G + + A+P
Sbjct: 38 RNVKIETGIIEKAEGSALVKLGKTQVIAGVKAGVGAPFKDTPNQGVLTVHAEFVPLASPV 97
Query: 93 FEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAV 152
FE + A ++ + R+ A DL+ L I G++ W L+VD+ I++ GNLFDA
Sbjct: 98 FEPGPPDENAIELARVVDRSLREVGAVDLESLVIRPGEKVWVLWVDLYIIDHDGNLFDAS 157
Query: 153 SLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVV 212
LAT A L R+P + + G + + + + K V + + VT KI VV
Sbjct: 158 MLATMAVLLTARLPRYEE--SETGEIIISKEGEGEELK---VKTRVVTVTTAKIDRYIVV 212
Query: 213 DPSAEEESCSVISLIVGITGNSKSYCADK-GASNITDVDIK 252
DP+ EEE+ S + L+ + N + K G ++T+ DI+
Sbjct: 213 DPNIEEEAVSDVRLVTAVDENGRIVGLQKTGMGSLTEADIE 253
>UniRef50_A3H8A6 Cluster: 3' exoribonuclease; n=1; Caldivirga
maquilingensis IC-167|Rep: 3' exoribonuclease -
Caldivirga maquilingensis IC-167
Length = 279
Score = 110 bits (264), Expect = 4e-23
Identities = 69/206 (33%), Positives = 104/206 (50%), Gaps = 7/206 (3%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
+ E R D R I R + + V+ A GSA + L NT ++ GIK E+ P D P+ G
Sbjct: 21 ISEGKRPDDRQLISMRDLTIRVGVIKTADGSALVNLGNTKVIAGIKFELGKPFEDTPNEG 80
Query: 78 KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYV 137
+ ++ A P FE + A I+ + RA S L+ L I+ GK + ++V
Sbjct: 81 NLIVNLETPPLAAPTFEPGPPDENAIEIARIIDRALRHSNYIPLRDLVIIPGKSVYSMWV 140
Query: 138 DILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD-PYDFKFLDVGS 196
DI +L GNL D+ LA +A+ N ++P ++DG NV L S P + ++ +
Sbjct: 141 DIYVLNHDGNLIDSSMLAAVSAIANAQVP---RAIIDGENVKLDKSTKIPLN---INPQN 194
Query: 197 APLLVTLCKIGEKCVVDPSAEEESCS 222
PL VT KI + +VDP+ EEE S
Sbjct: 195 MPLTVTYYKIDKYLIVDPTLEEEVMS 220
>UniRef50_Q2TZL0 Cluster: Exosomal 3'-5' exoribonuclease complex;
n=8; Eurotiomycetidae|Rep: Exosomal 3'-5'
exoribonuclease complex - Aspergillus oryzae
Length = 292
Score = 108 bits (260), Expect = 1e-22
Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 12/236 (5%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS E+ FI++ ++ED R DGR +RP+ + G +++L T ++V I +E
Sbjct: 7 LSIAERDFILNALREDVRLDGRQADQFRPLNVS---FGEEYGHVKVQLGKTSLIVRISSE 63
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQL 124
+ P D+P G ++ +A +P +E GR G+ L + +SN + R S A D + L
Sbjct: 64 VTKPHDDRPFDGIFTIALELTAMGSPAWENGRQGD-LETYVSNVLDRVIRHSNALDTESL 122
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
C+++G CW + D+ I GNL DA + A L + R P A++ D G V + D
Sbjct: 123 CVLKGVSCWNVRADVHITNYDGNLIDAACIGVMAGLQHFRRP--DAVVKD-GQVIVYGVD 179
Query: 185 DPYDFKFLDVGSAPLLVTLCKI--GEKCVVDPSAEEESCSVISLIVGITGNSKSYC 238
+ L++ PL VT G++ +VD + +EE S +++G+ N+ C
Sbjct: 180 ERVPVA-LNITHKPLSVTFHTFDEGKRVIVDATRKEEQASEADVVMGL-NNAGDVC 233
>UniRef50_UPI0000E45C6E Cluster: PREDICTED: similar to SCL75
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to SCL75 protein - Strongylocentrotus
purpuratus
Length = 437
Score = 107 bits (258), Expect = 2e-22
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 9/227 (3%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS+ E+ FI+ ++E R DGR DYR ++E V G + + +T IL + E
Sbjct: 4 LSNLEEDFILKAIEESKRLDGRQPYDYRRTKIEFGV---ERGCCMVHMGDTRILAQVSCE 60
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ PK ++P+ G++ ++ S A+ FE + ++ ++R S+A D++ LC
Sbjct: 61 VVEPKENRPNEGQLFVNLELSPMASTTFEAGRLSDYGIELNRLLERTVKDSRAVDVESLC 120
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD 185
IV G++ WK+ +D+ +L GN+ D+ LA AAL + R P V + G +V + D
Sbjct: 121 IVAGEKVWKIRLDVHVLNHDGNILDSACLAALAALSHFRRPDVTVI---GESVTIHSPQD 177
Query: 186 PYDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCSVISLIVGI 230
D L+V P+ VT G++ +VDP+ +EE +++VG+
Sbjct: 178 -RDPVPLNVHHIPVCVTFAFYHKGKRLLVDPTEKEEKVMEGTMVVGM 223
>UniRef50_Q8ZVN0 Cluster: Probable exosome complex exonuclease 2;
n=4; Pyrobaculum|Rep: Probable exosome complex
exonuclease 2 - Pyrobaculum aerophilum
Length = 274
Score = 107 bits (258), Expect = 2e-22
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 10/254 (3%)
Query: 22 FRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEF 81
+R DGR R +E+ VV A GSA ++L T ++ G+K + P PD PD G +
Sbjct: 28 YRVDGRGPEQTRNVEINVGVVKTADGSAEVKLGKTHVVAGVKVGLGQPFPDAPDEGVLVV 87
Query: 82 FVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILI 141
+ +A+P E + A ++ + R D K+L VEG + + L++D+ +
Sbjct: 88 NAEVLPHASPYTEVGPPDEFAIELARVVDRGIRHCGYVDFKKLA-VEGGKAYVLWIDLYV 146
Query: 142 LECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD-PYDFKFLDVGSAPLL 200
+ GNL D +LA+ AAL NT++P+V + + G V L ++ P +D+ AP+
Sbjct: 147 INDDGNLIDVANLASVAALKNTQLPVV--VKDEAGVVKLDRNNKAPLP---VDISKAPIA 201
Query: 201 VTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKGASNITDVDIKCS-TISMN 259
V++ KIG +DP+ EEE S+ I K A K T +I+ + +++
Sbjct: 202 VSVGKIGNVLFLDPTFEEE-LSLDGRITFTFSEDKIVAAQKTLGYFTQSEIEAALNLALR 260
Query: 260 GPGSLAPKTLKNAI 273
G L + LK+A+
Sbjct: 261 GRDRLL-EALKSAL 273
>UniRef50_Q7Q0D9 Cluster: ENSANGP00000011759; n=2; Culicidae|Rep:
ENSANGP00000011759 - Anopheles gambiae str. PEST
Length = 274
Score = 106 bits (254), Expect = 7e-22
Identities = 67/241 (27%), Positives = 116/241 (48%), Gaps = 7/241 (2%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
++ + R DGR + RP+ + DV+ A GSA +++ NT ++ GIK E+ TP P G
Sbjct: 19 LENNIRPDGRELEELRPLAISFDVIKSADGSAIVKVGNTTVVCGIKAELATPNALAPRHG 78
Query: 78 KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYV 137
+ VD S ++P + + A S ++ A +++ DL+QLCI GK W LY
Sbjct: 79 FLVPNVDLSPVSSPSYRPGPPCDEAQVYSQSVADAISNARCIDLQQLCISPGKLVWCLYC 138
Query: 138 DILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD-DPYDFKFLDVGS 196
D++ L+ G + DA +A AA ++P ++ N D + ++ D L V
Sbjct: 139 DLVCLDHDGCVLDAAIIALVAAFHTVKLPTIQY------NSDTEETEADTSRLLPLTVDC 192
Query: 197 APLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKGASNITDVDIKCSTI 256
P+ + + + + DP+ EEE + +L V ++ S+ G + +K T
Sbjct: 193 VPVTTSFVMVAGRLIADPTTEEEKLASTTLTVTVSDGKMSFFNQSGGDPMDSRTLKKCTD 252
Query: 257 S 257
S
Sbjct: 253 S 253
>UniRef50_Q54VM4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 324
Score = 103 bits (248), Expect = 4e-21
Identities = 51/117 (43%), Positives = 72/117 (61%)
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD 185
IV GK W LYVD ++L+ GNLFDA+S+A ++AL NTRIP VKA+ + + ++SDD
Sbjct: 171 IVSGKYYWTLYVDAIVLDSDGNLFDALSIACRSALQNTRIPRVKAIQGEYEEITFEVSDD 230
Query: 186 PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKG 242
P D L + + P+ VTL KIG + V+D + +EE C L VG+ + KG
Sbjct: 231 PEDTLSLSIDNVPICVTLTKIGNQFVIDTTLQEELCMNARLTVGVNSLANICSIQKG 287
Score = 96.3 bits (229), Expect = 8e-19
Identities = 51/125 (40%), Positives = 78/125 (62%), Gaps = 8/125 (6%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
+S +E +FI GV+ + RSDGR+ +DYR +ET + HA+GSAR++L+ T++LVG+K E
Sbjct: 4 ISPSESLFIQQGVENNIRSDGRNRVDYRNFAIETGEIIHANGSARVKLSQTEVLVGVKAE 63
Query: 66 ID------TPKPDKPDMGK-IEFFVDCSANATPEFEGRGGENLASSISNTMQRAY-HSSQ 117
I T + D K + F V+C +A+PEFEG+G E L +S ++R Y H +
Sbjct: 64 ITHIQSEITSNLQQSDTSKRLVFSVNCCPSASPEFEGKGSEFLNIELSKQLERLYSHPNV 123
Query: 118 AFDLK 122
+LK
Sbjct: 124 IKNLK 128
>UniRef50_A3FQP8 Cluster: Exoribonuclease PH, putative; n=2;
Cryptosporidium|Rep: Exoribonuclease PH, putative -
Cryptosporidium parvum Iowa II
Length = 295
Score = 103 bits (248), Expect = 4e-21
Identities = 80/259 (30%), Positives = 131/259 (50%), Gaps = 24/259 (9%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
+S +EK+F+ GV + R+DGR D+RP+ + DV+S A+GS+R+R DI+V +K
Sbjct: 20 ISDSEKLFLEDGVDQGIRNDGRDLTDFRPIVIALDVISTANGSSRIRNDELDIIVAVKVS 79
Query: 66 IDTPKPDKPDMGKIEF---FVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLK 122
+ I F +D +N P F E+ + I+N ++ + FDL
Sbjct: 80 F-LNNLFFFIIALILFSSNIMDKISNVAPSFTE---EDYSFYITNIVKDMCFKN--FDLS 133
Query: 123 QLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLV---KALLMDGGNVD 179
+L I+E K W +Y+D IL GGN+ D V++A AL TRIP + ++ N D
Sbjct: 134 KLTILENKLYWNIYIDATILSFGGNMVDWVTIAIHTALRTTRIPKIHVSPSISTKENNKD 193
Query: 180 LQLSDDP-----YDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNS 234
+ + P F F D+ P +++ I K + D + +E+ CS I+ ++ NS
Sbjct: 194 VSYTVSPSVCSGTPFPFQDI---PFIISAGCIRGKVIWDMNMQEQICS--KTIIALSINS 248
Query: 235 KSYCA--DKGASNITDVDI 251
K C +K SN D+++
Sbjct: 249 KGECVAMNKVYSNTLDLNL 267
>UniRef50_Q96B26 Cluster: Exosome complex exonuclease RRP43; n=37;
Eumetazoa|Rep: Exosome complex exonuclease RRP43 - Homo
sapiens (Human)
Length = 276
Score = 103 bits (246), Expect = 7e-21
Identities = 70/238 (29%), Positives = 113/238 (47%), Gaps = 9/238 (3%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
++E+ R DGR ++R + +S A GSA ++L NT ++ G+K E P D PD G
Sbjct: 18 LKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVICGVKAEFAAPSTDAPDKG 77
Query: 78 KIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLY 136
+ VD + F G GE A S + +SQ + LCI GK W LY
Sbjct: 78 YVVPNVDLPPLCSSRFRSGPPGEE-AQVASQFIADVIENSQIIQKEDLCISPGKLVWVLY 136
Query: 137 VDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGS 196
D++ L+ GN+ DA + A AAL N ++P V + + ++ L Y L++ +
Sbjct: 137 CDLICLDYDGNILDACTFALLAALKNVQLPEV-TINEETALAEVNLKKKSY----LNIRT 191
Query: 197 APLLVTLCKIGEK-CVVDPSAEEESCSVISLIVGITGNSKSYCADK-GASNITDVDIK 252
P+ + + +VDP+ EEE + +L + + K C K G S +T ++
Sbjct: 192 HPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGKLCCLHKPGGSGLTGAKLQ 249
>UniRef50_UPI000051A59D Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP43 (Ribosomal RNA-processing
protein 43) (Exosome component 8) (p9) (Opa-interacting
protein 2); n=3; Endopterygota|Rep: PREDICTED: similar
to Exosome complex exonuclease RRP43 (Ribosomal
RNA-processing protein 43) (Exosome component 8) (p9)
(Opa-interacting protein 2) - Apis mellifera
Length = 281
Score = 102 bits (245), Expect = 9e-21
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 7/223 (3%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKI 79
+D R DGR + +RP+ + ++HA SA ++ NT I+ GIK+E+ PK + P+ G I
Sbjct: 20 QDVRPDGRQFLSFRPISVNISSITHADSSAIFKIGNTTIVCGIKSELAVPKAESPECGYI 79
Query: 80 EFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDI 139
++ +P+F + A I+ ++ +S A DLK+LC+ +GK W LY D+
Sbjct: 80 VPNIELPPLCSPKFRPGPPSDQAQVITKLVENILRNSAAIDLKELCVYKGKLVWVLYCDL 139
Query: 140 LILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPL 199
+ + G++ DA A A L +P + ++ G+V + + +F + + P+
Sbjct: 140 VCINYDGSIIDACIGALTATLNTLTLPEI-FYNVETGHVSI---NSTKRIRF-PIKALPV 194
Query: 200 LVTLCKIGEKCVV-DPSAEEESCSVISLIVGITGNSKSYCADK 241
+T + ++ DP+ +EES + L + + K C K
Sbjct: 195 SITFAIFDNQLLIADPTDDEESLCLGKLTI-VMNEEKICCIHK 236
>UniRef50_UPI0000DB70B0 Cluster: PREDICTED: similar to exosome
component 9; n=1; Apis mellifera|Rep: PREDICTED: similar
to exosome component 9 - Apis mellifera
Length = 396
Score = 102 bits (244), Expect = 1e-20
Identities = 68/231 (29%), Positives = 115/231 (49%), Gaps = 8/231 (3%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
M +LLS+ EK F+ V++ R DGRS ++ RP+++ + GS + L T ++
Sbjct: 1 MKEILLSNCEKNFVNKSVEQGIRLDGRSLLEARPVKI---YFASNWGSCMVLLGQTRVIA 57
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
+ +I PK +P+ G + V+ + A F+ ++ IS +++ Y S+ D
Sbjct: 58 QVTCDIQQPKTSRPNEGMLHINVELNPMAAQHFDSGRQSEISILISRQLEKCYQDSKCID 117
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L+ LCI+ K+ W L VDI ++ GNL D S+AT AAL + P V + +G ++ +
Sbjct: 118 LESLCIIADKKVWNLRVDINVINHDGNLIDCASIATLAALSHFHRPDVTS---NGEDIIV 174
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKI-GEKCVVDPSAEEESCSVISLIVGI 230
+ D L + P+ V+ V+DP+ EE V L +GI
Sbjct: 175 HPFSEK-DPLPLTLYHYPVCVSFITFESGNTVMDPTYLEERIGVAQLTLGI 224
>UniRef50_Q9M209 Cluster: Nucleolar autoantigen-like protein; n=8;
Magnoliophyta|Rep: Nucleolar autoantigen-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 438
Score = 101 bits (241), Expect = 3e-20
Identities = 67/233 (28%), Positives = 113/233 (48%), Gaps = 10/233 (4%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
L+ E F+ +Q + R DGR DYR + ++ GS+ ++L T ++ + +
Sbjct: 11 LTVNESKFVETALQSELRVDGRGLYDYRKLTIK---FGKEYGSSEVQLGQTHVMGFVTAQ 67
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQL 124
+ P D+P+ G + F + S A P FE GR GE+ A + + R S+A D + L
Sbjct: 68 LVQPYKDRPNEGSLSIFTEFSPMADPSFEPGRPGES-AVELGRIIDRGLRESRAVDTESL 126
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
C++ GK W + +D+ IL+ GGNL DA ++A AAL R P +G V + +
Sbjct: 127 CVLAGKMVWSVRIDLHILDNGGNLVDAANIAALAALMTFRRPDCTVGGENGQEVIIHPLE 186
Query: 185 DPYDFKFLDVGSAPLLVT--LCKIGEKCVVDPSAEEES--CSVISLIVGITGN 233
+ + + P+ T G V+DP+ EE+ C +++ V G+
Sbjct: 187 EREPLPLI-IHHLPIAFTFGFFNKGNIVVMDPTYVEEAVMCGRMTVTVNANGD 238
>UniRef50_UPI0000D55D29 Cluster: PREDICTED: similar to Exosome
complex exonuclease RRP45 (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a...; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to Exosome complex exonuclease RRP45
(Exosome component 9) (Polymyositis/scleroderma
autoantigen 1) (Autoantigen PM/Scl 1)
(Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome associated a... - Tribolium castaneum
Length = 389
Score = 100 bits (239), Expect = 5e-20
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 10/237 (4%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
L+++ E+ F++ + E R DGRS ++RP+EL+ GS + L NT +L
Sbjct: 8 LITNCERKFLMKCLSEWRRLDGRSFDEFRPLELK---FGKQWGSCYVSLGNTKVLAQTSC 64
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
EI PK +P G + ++ + A P FE L+ ++ +++ S+A DL+ L
Sbjct: 65 EIQQPKSSRPSEGILNINIELNPLAAPHFEAGRQSELSVQLNRLLEKCVKDSKAVDLESL 124
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
CI ++ W L VDI +L GN+ D S+A A+L + R P V DG + S
Sbjct: 125 CIKTNEKVWALKVDINVLNHEGNILDCASIAMLASLTHFRRPDVTC---DGEEFIIH-SY 180
Query: 185 DPYDFKFLDVGSAPLLVTLCKI--GEKCVVDPSAEEESCSVISLIVGITGNSKSYCA 239
D + P+ +T GE + DPS EE + L +G+ G K CA
Sbjct: 181 QQRDPIPTVIHHYPVCITYAIFNGGEYILADPSLLEEGSADAMLTIGLNG-FKELCA 236
>UniRef50_A0RXU0 Cluster: RNase PH-related exoribonuclease; n=1;
Cenarchaeum symbiosum|Rep: RNase PH-related
exoribonuclease - Cenarchaeum symbiosum
Length = 270
Score = 100 bits (239), Expect = 5e-20
Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 14/240 (5%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R DGR + R + +ET+ + A GSAR+ L TD++ G+K + D P PD D G
Sbjct: 24 RIDGRRLDEPRKLTIETNAIPKAEGSARVHLGRTDVVTGVKVQPDRPFPDVGDRGIFICT 83
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
+ A P+ E ++ + R S DL +L +++ K ++ D ++
Sbjct: 84 AEILPLAHPDVETGPPSPAVIELARVVDRGIRESGMVDLSKLVLLKDKSVIGIFADSSVI 143
Query: 143 ECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVT 202
+ GNLFDA S A AA+ ++P K + D V ++ + P + V + P+ VT
Sbjct: 144 DVDGNLFDACSYAATAAILTAKLP--KWEIQDEAPVRIE-GETP-----VPVTTIPVSVT 195
Query: 203 LCKIGEKCVVDPSAEEESCSVISLIVGITGNSK-SYCA-DKGA-SNITDVD-IKCSTISM 258
+ KI +VDP+ +E +V+ + IT NS + CA KG S T + +KC IS+
Sbjct: 196 MAKINGHILVDPNQDE--WAVMDARITITTNSDGNICALQKGGNSGFTHAELVKCGEISV 253
>UniRef50_Q00YJ4 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp42; n=2; Ostreococcus|Rep: Exosomal 3'-5'
exoribonuclease complex, subunit Rrp42 - Ostreococcus
tauri
Length = 314
Score = 99.1 bits (236), Expect = 1e-19
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 24/244 (9%)
Query: 10 EKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 69
++ + GV +D R DGR R + + VV +A+GS + L T + ++ ++
Sbjct: 4 DRAYARDGVADDCREDGRGRATRRALRMAIGVVPNANGSCAVTLGETSCVAAVRCDVTAI 63
Query: 70 KP-DKPDMGKIEFFVDCSANATPEFEGRG---GENLAS-----------SISNTMQRAYH 114
+ + D+G I VD S+ AT GR GE L +S+ RA
Sbjct: 64 EAWEASDVGAIVLRVDASSIATTR-AGRAAAVGETLRRRLESVVAGRERGVSDASGRASG 122
Query: 115 SSQ------AFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLV 168
S DL+ LC+ G+ W L VD + G++ DA+S+A + AL +T+IP V
Sbjct: 123 SGVDAWDGGGIDLRSLCVRPGRARWTLAVDAVCACDRGSMLDALSVAVRGALADTKIPKV 182
Query: 169 KALLM--DGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISL 226
+ + DG +L++ DDP +DV ++ T KIG+ VVD + EEE+C+ S+
Sbjct: 183 SLVGVGSDGEGGELEIDDDPDACTRVDVSRCGVVATTTKIGKHGVVDATDEEEACAEASM 242
Query: 227 IVGI 230
VG+
Sbjct: 243 SVGV 246
>UniRef50_Q9ZUI4 Cluster: T2K10.14 protein; n=10; Magnoliophyta|Rep:
T2K10.14 protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 302
Score = 97.5 bits (232), Expect = 3e-19
Identities = 66/170 (38%), Positives = 84/170 (49%), Gaps = 10/170 (5%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
F + E R DGR R + +VS A GSA ++ +T +L I+ E+ TP D
Sbjct: 27 FFERHLSESLRPDGRQLGKARDTIVNLGLVSTADGSALAKIGSTTMLAAIRMEVMTPSTD 86
Query: 73 KPDMG--KIEFFVD--CSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVE 128
PD G IEF + CS P GR E A IS + SS DLK+LC+V
Sbjct: 87 SPDEGCIAIEFHMPPICSPTVRP---GRPAE-AAPVISKRLSDTILSSGMIDLKELCLVS 142
Query: 129 GKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 178
GK W Y+DI L+ G LFDA LA AA N +IP+V L D G +
Sbjct: 143 GKAAWMGYLDIYCLDADGALFDAALLAAVAAFSNLQIPIV--ALNDNGRI 190
>UniRef50_Q55BJ2 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 526
Score = 97.5 bits (232), Expect = 3e-19
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 17/279 (6%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
++S EK F++ +++ R DGR D R +++E + G ++L T + I
Sbjct: 4 VISKNEKDFVLSSIEKLQRIDGRGVNDMRAIKIE---FGKSYGVVEVQLGKTRVFTAITC 60
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
+I PKP++P+ G F D S ++ + S + +++ S+A D + L
Sbjct: 61 DIVEPKPERPNEGFYIFNTDISPMSSVSVNVNQPNPMESELGRIIEKGLKDSRAIDTEAL 120
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
CI+ G + W + + I +L+ GNL D S++ AL + R P V + G + + D
Sbjct: 121 CIISGSKVWSIKIAIHVLDDCGNLLDCASISVMTALIHFRKPDVTVI---GNDATIHSLD 177
Query: 185 DPYDFKFLDVGSAPLLVTLCKI-GEKCVVDPSAEEESC--SVISLIVGITGNSKSYC-AD 240
+ L + P+ +T E +VDP +EES +S V I K C
Sbjct: 178 EREPVP-LSIHHTPISITFGFFPNEIMIVDPDTKEESVMDGKLSFFVNI---HKEICGVS 233
Query: 241 KGASNITDVD--IKCSTISMNGPGSLAPKTLKNAIHQGM 277
KG T +D +KCS I++ + + ++ +IH+ +
Sbjct: 234 KGGGTSTTIDQVLKCSKIAVIKAAEITLQ-IRESIHENL 271
>UniRef50_Q06265 Cluster: Exosome complex exonuclease RRP45; n=40;
Eumetazoa|Rep: Exosome complex exonuclease RRP45 - Homo
sapiens (Human)
Length = 439
Score = 97.5 bits (232), Expect = 3e-19
Identities = 71/257 (27%), Positives = 123/257 (47%), Gaps = 13/257 (5%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS+ E+ F++ ++E R DGR DYR + + G + L T +L + E
Sbjct: 6 LSNCERRFLLRAIEEKKRLDGRQTYDYRNIRISFGT---DYGCCIVELGKTRVLGQVSCE 62
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ +PK ++ G + F ++ S A P FE +L ++ M+R +S+ D + LC
Sbjct: 63 LVSPKLNRATEGILFFNLELSQMAAPAFEPGRQSDLLVKLNRLMERCLRNSKCIDTESLC 122
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD 185
+V G++ W++ VD+ +L GN+ DA S+A AL + R P V + G V L ++
Sbjct: 123 VVAGEKVWQIRVDLHLLNHDGNIIDAASIAAIVALCHFRRPDVS---VQGDEVTLYTPEE 179
Query: 186 PYDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADKGA 243
D L + P+ V+ + G +VDP+ EE + L+V + C + +
Sbjct: 180 -RDPVPLSIHHMPICVSFAFFQQGTYLLVDPNEREERV-MDGLLVIAMNKHREICTIQSS 237
Query: 244 SNI---TDVDIKCSTIS 257
I D ++CS I+
Sbjct: 238 GGIMLLKDQVLRCSKIA 254
>UniRef50_UPI00006610C8 Cluster: Exosome complex exonuclease RRP45
(EC 3.1.13.-) (Exosome component 9)
(Polymyositis/scleroderma autoantigen 1) (Autoantigen
PM/Scl 1) (Polymyositis/scleroderma autoantigen 75 kDa)
(PM/Scl-75) (P75 polymyositis-scleroderma overlap
syndrome-associated autoa; n=1; Takifugu rubripes|Rep:
Exosome complex exonuclease RRP45 (EC 3.1.13.-) (Exosome
component 9) (Polymyositis/scleroderma autoantigen 1)
(Autoantigen PM/Scl 1) (Polymyositis/scleroderma
autoantigen 75 kDa) (PM/Scl-75) (P75
polymyositis-scleroderma overlap syndrome-associated
autoa - Takifugu rubripes
Length = 336
Score = 96.7 bits (230), Expect = 6e-19
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 3/166 (1%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS++E+ F++ + E R DGR DYR +++ G + L T ++ + E
Sbjct: 6 LSNSERDFLLKAIAEKKRLDGRQTYDYRRIKVSFGA---DYGCCFVELGETRVMAQVSCE 62
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ PK +P+ G + F ++ S A+P FE L+ ++ ++R +S+ D + LC
Sbjct: 63 LVAPKESRPNEGILFFNIELSPMASPAFEAGRQSELSVKLNRQLERCLRNSKCIDTESLC 122
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKAL 171
+V G++ W++ VD+ +L GNL DA S+A AL + R P V ++
Sbjct: 123 VVSGEKVWQIRVDVHLLNHDGNLMDAASIAAITALSHFRRPDVSSV 168
>UniRef50_A7DRS4 Cluster: 3' exoribonuclease; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: 3' exoribonuclease -
Candidatus Nitrosopumilus maritimus SCM1
Length = 272
Score = 96.3 bits (229), Expect = 8e-19
Identities = 77/267 (28%), Positives = 136/267 (50%), Gaps = 15/267 (5%)
Query: 14 IVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDK 73
I+ +++ R DGR+ + R + +ET+ + A+GSAR+RL +T+++ G+K + D P PD
Sbjct: 15 ILELLEQGKRVDGRALDESREVSIETNAIPKANGSARVRLGDTEVVCGVKIQPDRPFPDT 74
Query: 74 PDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQC 132
D G + + P E G G + ++ + R S D+ QL I + K
Sbjct: 75 GDKGLFICTAELLPLSHPTVETGPPGPEVI-ELARVVDRGIRESHMIDVSQLVIEKDKSV 133
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFL 192
++ D ++++ GNLFDA S A AAL +++ P K +D + + + D +
Sbjct: 134 IGVFADNVVVDYDGNLFDACSYAATAALLSSKSP--KWNWVD--DAPALVEGEEVD---V 186
Query: 193 DVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCA-DKGASN--ITDV 249
+ + P+ VT+ KIG +VDP+ +E + S+ + I + + + CA KG + D
Sbjct: 187 PITTIPVSVTMGKIGNHIIVDPNGDEWA-SMDARITITSDSDGNICALQKGGDDGFTQDE 245
Query: 250 DIKCSTISMNGPGSLAPKTLKNAIHQG 276
++C IS+ G+ + LK A QG
Sbjct: 246 IVQCGEISVR-VGAKIREKLK-AAQQG 270
>UniRef50_Q5KMZ6 Cluster: Opa-interacting protein OIP2, putative;
n=1; Filobasidiella neoformans|Rep: Opa-interacting
protein OIP2, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 297
Score = 94.3 bits (224), Expect = 3e-18
Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 6/184 (3%)
Query: 32 YRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANATP 91
+R + + T +S A GSA +R+ +T ++ G+K E+ P + P G + +D A ++P
Sbjct: 73 WRQVSINTGSISTAHGSALVRMGDTTMVCGVKAEVGEPDAEAPGEGFVVPNIDLPALSSP 132
Query: 92 EFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDA 151
+F+ + A + SN + SS+ L L I GK W LY+D++ + GN FDA
Sbjct: 133 KFKPGPPGDEAQTYSNWLYELLVSSKTIPLSSLLIAPGKAAWVLYIDVVCINYDGNAFDA 192
Query: 152 VSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCV 211
LA AAL NTR+P KA+ D + + Y L +G PL + I E+C
Sbjct: 193 AVLAVMAALRNTRLP--KAVYDDDTQRTICSRTERYP---LSLGRMPLACSF-GIFERCH 246
Query: 212 VDPS 215
PS
Sbjct: 247 PPPS 250
>UniRef50_Q6CFB7 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 299
Score = 93.5 bits (222), Expect = 5e-18
Identities = 56/174 (32%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
++S ++ F+ ++ R DGRS + RPME+ G L + T ++V I
Sbjct: 1 MISINDRKFLTEALKVSKRLDGRSMEEQRPMEV---TFGSQFGHVELTMGKTKVVVRISA 57
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
EI P +P G D + A+P FE IS +++A S A DL+ L
Sbjct: 58 EITKPNERRPFEGIFVVHTDIGSMASPIFENNHQSEQEIMISQVVEKAVRRSGALDLESL 117
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNV 178
CIV GK+CW++ D+ L+ G L DA A A L++ + P V +DGG V
Sbjct: 118 CIVAGKKCWEIRADVHYLDFDGGLVDATCAAVMAGLYHFKKPDVD---VDGGAV 168
>UniRef50_Q4PHF3 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 379
Score = 91.9 bits (218), Expect = 2e-17
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 25/199 (12%)
Query: 1 MAGLLLSSTEKVFIVHGVQED--FRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDI 58
MA +LS ++ F + G+ D RSDGR + +R +++ET V + A+GS+R+ L T+I
Sbjct: 1 MAPQVLSRSQGDFFLRGLTSDPPQRSDGRDLLAFRSLDVETGVAAQANGSSRITLGGTEI 60
Query: 59 LVGIKTEIDTPKPDKPD---------------------MGKIEFFVDCSANATPEFEGRG 97
L GIK E+ + D D MG+I+ VD S + F+ +
Sbjct: 61 LCGIKAEVRSFGDDSDDEDEEAEFRTQDELELASESRKMGRIKCSVDYSQSLIHSFDSKS 120
Query: 98 GENLASSISNTMQRAYHS-SQAFDLKQLCIVEGKQCWKLYVDILILEC-GGNLFDAVSLA 155
++L+ S+S+ + + S L+QL I+ + W +Y+D+L+ GGNLFDA A
Sbjct: 121 LDSLSISLSSMVNSTFSPRSCPLPLQQLLIIANAKHWTIYIDLLVNSLSGGNLFDAAFAA 180
Query: 156 TKAALFNTRIPLVKALLMD 174
+A ++TR+P+ + + +
Sbjct: 181 IFSAFYDTRVPVTRGVAFE 199
>UniRef50_Q10205 Cluster: Putative exosome complex exonuclease
RRP43; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP43 - Schizosaccharomyces
pombe (Fission yeast)
Length = 270
Score = 91.9 bits (218), Expect = 2e-17
Identities = 51/158 (32%), Positives = 82/158 (51%)
Query: 9 TEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDT 68
T + ++ H + +D RSDGRS ++R + + + +S A+GSA +R + GIK EI
Sbjct: 21 TPEQYLSHLLNQDVRSDGRSVSEFREIVINDNCISTANGSAIIRAGENVFVCGIKAEIAE 80
Query: 69 PKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVE 128
P + P+ G I ++ S + +F+ +LA +S + + S +L+ LCI E
Sbjct: 81 PFENSPNEGWIVPNLELSPLCSSKFKPGPPSDLAQVVSQELHQTLQQSNLINLQSLCIFE 140
Query: 129 GKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
K W LY DI+ L G+ FD A AAL ++P
Sbjct: 141 KKAAWVLYADIICLNYDGSAFDYAWAALFAALKTVKLP 178
>UniRef50_Q7RZN0 Cluster: Putative uncharacterized protein
NCU00334.1; n=7; Pezizomycotina|Rep: Putative
uncharacterized protein NCU00334.1 - Neurospora crassa
Length = 297
Score = 91.5 bits (217), Expect = 2e-17
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 7 SSTEKVFIVHGVQ-EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
S+ EK F++ +Q E R DGR YRP+EL G A + L T IL E
Sbjct: 8 SANEKAFLLKALQDEQIRLDGREFDQYRPLEL---TFGDEYGVANVSLGKTKILAKASAE 64
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ P D+P G + S A P FE +S +++ S A D + LC
Sbjct: 65 VTVPFADRPLDGIFTIATELSPMAAPHFEVNRPTETEVLLSRLLEKTVRRSGALDTESLC 124
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
+V G++CW + VD+ +L GNL DA A AAL + R P
Sbjct: 125 LVAGQKCWSVRVDVHVLSHDGNLTDAACFAVVAALRHFRKP 165
>UniRef50_Q23PW9 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1
containing protein - Tetrahymena thermophila SB210
Length = 776
Score = 90.6 bits (215), Expect = 4e-17
Identities = 56/216 (25%), Positives = 100/216 (46%), Gaps = 7/216 (3%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
+LS E F++ G++ + R DGR +D R +++ + + G + + +T I+
Sbjct: 448 VLSQNESDFVLSGLENEIRLDGRKLMDSRNIKV---IFGNNVGEIEVLIGDTHIITKTTA 504
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGG-ENLASSISNTMQRAYHSSQAFDLKQ 123
EI PK +KP+ G ++F VD S+ + + ++ I +++ S+A D++
Sbjct: 505 EIIQPKQEKPNEGSLKFNVDLSSMQDEQQPNNVNIKKYSNEIQKLLEKIIKGSKAIDMES 564
Query: 124 LCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLS 183
LCIV K+ W + VD ++ GGNL DA+ L+ +L + R P V + + +
Sbjct: 565 LCIVTNKRVWSINVDSSVVSNGGNLIDAIYLSVIISLLHFRKPYVSVEQQSNIKIHTEKN 624
Query: 184 DDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEE 219
P + + P K V DP EE
Sbjct: 625 PQPLSIHHIPI---PFTFAFFKKSTLLVSDPLVLEE 657
>UniRef50_UPI00015B5DF5 Cluster: PREDICTED: similar to SCL75
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to SCL75 protein - Nasonia vitripennis
Length = 412
Score = 89.4 bits (212), Expect = 9e-17
Identities = 67/233 (28%), Positives = 105/233 (45%), Gaps = 12/233 (5%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
M +S EK F+ +Q D R DGR+ ++ RP+++ G + L T
Sbjct: 1 MKETFISICEKNFVNKAIQTDTRIDGRTLLEPRPLKINFGT---NWGCCVVSLGQTRAAA 57
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
+ +I PK +P+ G + V+ + A FE A+ I+ ++++ S+ D
Sbjct: 58 QVSCDIQQPKASRPNEGMLHVNVELNPLAAQHFESGRQSEAAALINRQLEKSLKESRCVD 117
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L+ LCIV K+ W + VD+ I+ GNL D S+A AAL + P V + G V +
Sbjct: 118 LESLCIVADKKVWNIRVDVSIINHDGNLIDCASIAALAALMHFHRPDVTS---TGEEVII 174
Query: 181 Q--LSDDPYDFKFLDVGSAPLLVTLCKI-GEKCVVDPSAEEESCSVISLIVGI 230
DP L + P+ ++ K VVDPS EE L +GI
Sbjct: 175 HPFTEKDPLP---LTLYHHPVCISFITFENGKTVVDPSYLEERVGAAILTLGI 224
>UniRef50_Q4YPT7 Cluster: Exoribonuclease PH, putative; n=5;
Plasmodium|Rep: Exoribonuclease PH, putative -
Plasmodium berghei
Length = 281
Score = 87.0 bits (206), Expect = 5e-16
Identities = 56/231 (24%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
+I G+ + R DGR+ + YR +E+ ++ A GS+ + +++ GIK + P+
Sbjct: 6 YIEEGINSNIRVDGRTLLTYRTIEINKSILVSADGSSSVMNEENNVICGIKLSLLPPEQH 65
Query: 73 KPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQC 132
D G + +DC A+ + + +SI + D K+LC++ K
Sbjct: 66 SIDEGFVNLQIDCPASVASNRIKKEHLQIMTSIIYDL----CIKNNIDKKKLCVLPSKFV 121
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKA-LLMDGGNVDLQLSDDPYDFKF 191
W + +++++L GG L D +S+A AL + IP+VKA +D N+ Y+ +
Sbjct: 122 WGIDINVMVLNGGGGLLDIISIAIYVALNDMNIPVVKAPKKIDELNMFHNTKSKEYELEI 181
Query: 192 LD-------VGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSK 235
++ + P+ +++ +I K + D S EE +V +T + K
Sbjct: 182 VENEKLPFPCENIPICISIGEINNKYIYDMSKIEEELVENVFVVAVTSSGK 232
>UniRef50_O74918 Cluster: Putative exosome complex exonuclease
RRP45; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP45 - Schizosaccharomyces
pombe (Fission yeast)
Length = 291
Score = 87.0 bits (206), Expect = 5e-16
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 9/229 (3%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
S K F+++ +++ R DGR D+R +E++ G + +T ++ I TEI
Sbjct: 8 SLNNKEFVLNSLEKGLRLDGRQLSDFRSLEIQ---FGKEYGQVDVSFGHTRVMARITTEI 64
Query: 67 DTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCI 126
P D+P G + + A FE + IS +++A S A D + LCI
Sbjct: 65 TKPYTDRPFDGIFSITTELTPLAYSAFEAGRVSDQEIVISRLIEKAVRRSNALDTESLCI 124
Query: 127 VEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDP 186
+ G++CW + + + GNL DA +A AAL + R P L + G V + ++
Sbjct: 125 ISGQKCWHVRASVHFINHDGNLVDAACIAVIAALCHFRRP---ELTVVGEEVTVHPVEER 181
Query: 187 YDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCSVISLIVGITGN 233
L + P+ VT GE +VD + EEE S+ + + N
Sbjct: 182 VPVP-LSILHMPICVTFSFFNNGELAIVDATLEEEDLCNGSMTITLNKN 229
>UniRef50_Q4T221 Cluster: Chromosome undetermined SCAF10362, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF10362,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 75
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
MA + +S EKV+++HG+++D R DGR DYR ME+ETDVVS+ GSA++ L +T +LV
Sbjct: 1 MATVEVSEAEKVYVLHGIRDDLRVDGRGCEDYRHMEIETDVVSNTDGSAKVTLGHTVVLV 60
Query: 61 GIKTEIDTPK 70
GIKTEI K
Sbjct: 61 GIKTEIGKTK 70
>UniRef50_A7ARR1 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 267
Score = 81.4 bits (192), Expect = 2e-14
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 12/229 (5%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
FI + + + R DGR D + +E +V + A GSA++ L +T ++ I + +P +
Sbjct: 3 FIRNALAANCRLDGRRLDDNPKILIEPNVSTGAHGSAKVILDDTVVITTIMFHVTSPNTN 62
Query: 73 KPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQC 132
P+ G +E + + + + I +Q +H Q F+ K LCI+ G+
Sbjct: 63 SPEEGNVEITLGSPFTLEDSDISQKRDERMAHILEMLQ--FHK-QLFNRKLLCILSGQYV 119
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMD-------GGNVDLQLSDD 185
W + + +L+ GG + DAVS+A A+ +P ++ ++ D NV L+ +
Sbjct: 120 WTMRIHTTVLQRGGGVMDAVSVAVICAMLTVSVPNIRGVIKDELESSRTATNVRLRTMEG 179
Query: 186 -PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGN 233
D + L P+LVT+ +IGE V + EE +C+ L V + N
Sbjct: 180 YNTDIEKL-AREIPVLVTVARIGESHVWSVNQEEAACADGFLTVAVFPN 227
>UniRef50_Q20128 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 434
Score = 81.0 bits (191), Expect = 3e-14
Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 14/245 (5%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
+++ EK I+ ++ R D RS ++R ++L VV G+A + NT ++ + E
Sbjct: 6 VTNCEKAVILEALKIGKRFDFRSLEEFRDVKL---VVGAEVGTAICTIGNTKVMAAVSAE 62
Query: 66 IDTPKPDKPDMGKIEFFVDCS--ANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQ 123
I P +P G I VD S AN E + G + + + ++ S+ D++
Sbjct: 63 IAEPSSMRPHKGVINIDVDLSPMANYANEHDRLGSKGM--ELIRLLELIIRDSRCIDVEA 120
Query: 124 LCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLS 183
LCI GK+ WK+ VD+ IL+ G+L D LA AL + R P V L + +
Sbjct: 121 LCIRAGKEIWKIRVDVRILDEDGSLLDCACLAAITALQHFRRPNV-TLEPHHTLIYSEYE 179
Query: 184 DDPYDFKFLDVGSAPLLVT--LCKIGEKCVVDPSAEEESCSVISLIVGITGNSKSYCADK 241
P L++ P+ T L G+ V+DP+ +E +C S++V + CA
Sbjct: 180 KAPVP---LNIYHMPICTTIGLLDKGQIVVIDPTDKETACLDGSIVVA-CNKRREVCALH 235
Query: 242 GASNI 246
++N+
Sbjct: 236 QSTNL 240
>UniRef50_Q05636 Cluster: Exosome complex exonuclease RRP45; n=9;
Saccharomycetales|Rep: Exosome complex exonuclease RRP45
- Saccharomyces cerevisiae (Baker's yeast)
Length = 305
Score = 81.0 bits (191), Expect = 3e-14
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
+S++E FI+ +++++R DGRS +R +E+ G +++ NT + I +
Sbjct: 7 ISASESKFILEALRQNYRLDGRSFDQFRDVEI---TFGKEFGDVSVKMGNTKVHCRISCQ 63
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRG--GENLASSISNTMQRAYHSSQAFDLKQ 123
I P D+P G + S A +FE GE+ S ++++ S A D++
Sbjct: 64 IAQPYEDRPFEGLFVISTEISPMAGSQFENGNITGEDEVLC-SRIIEKSVRRSGALDVEG 122
Query: 124 LCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
LCIV G +CW + D+ L+C G DA +A A L + + P
Sbjct: 123 LCIVAGSKCWAVRADVHFLDCDGGFIDASCIAVMAGLMHFKKP 165
>UniRef50_Q8T4A9 Cluster: AT07738p; n=2; Sophophora|Rep: AT07738p -
Drosophila melanogaster (Fruit fly)
Length = 412
Score = 80.2 bits (189), Expect = 5e-14
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
S E+ F+ V+++ R DGR + + R +EL GS + + +T +L + E+
Sbjct: 13 SKPERSFVQLAVKQNQRLDGRRSNESRDVEL---TFGKDWGSVAVSMGDTKVLAQVTCEM 69
Query: 67 DTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCI 126
P +P+ GKI V A + + + +++ ++R + SS++ DL+ LC+
Sbjct: 70 GPPALSRPNEGKIHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCV 129
Query: 127 VEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQL-SDD 185
K W + V++ +L GNL+DA ++AT AAL + R P V DG +L++
Sbjct: 130 AVEKHVWCIRVNVNVLNHDGNLYDASTIATLAALMHFRRPDV--WYKDG---ELRIFKKK 184
Query: 186 PYDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCS 222
+F L P+ VT C K + ++DP+ EE+ +
Sbjct: 185 EREFIPLLFHHYPVSVTYCVYKSSVQPILDPTLLEENAA 223
>UniRef50_A7AUY6 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Babesia bovis|Rep: 3'
exoribonuclease family, domain 1 containing protein -
Babesia bovis
Length = 196
Score = 79.0 bits (186), Expect = 1e-13
Identities = 50/158 (31%), Positives = 84/158 (53%), Gaps = 4/158 (2%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R DGR++I +P ++ + +++ G+ + L +T + V + +EI P + P G + F
Sbjct: 34 RLDGRTSI--QPRKIHVEQLANP-GNVIVSLGDTIVFVAVSSEIVPPNVEHPTEGIVTFS 90
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
V+ S + +E ++ IS +++ Y S D++ LCIV K W L V+I IL
Sbjct: 91 VELSPMCSLNYEPGKASDVEQEISYAIEKIYKDSGIIDVESLCIVSRKHVWCLRVNIHIL 150
Query: 143 ECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
+ GNL DA ++A AL + R P + L DG +DL
Sbjct: 151 QNDGNLLDATNIAVFKALMSYRKPDTQ-LNGDGMRLDL 187
>UniRef50_A7TJI7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 266
Score = 76.2 bits (179), Expect = 9e-13
Identities = 61/227 (26%), Positives = 114/227 (50%), Gaps = 16/227 (7%)
Query: 6 LSSTEKVFIVHGVQE--DFRSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILVGI 62
LS EK ++ + R DGR +RP+E+ TD + +++GS+R+ ++ ++ +V +
Sbjct: 3 LSVAEKSYLYDSLSAFPAIRPDGRKPYQFRPIEISTDFLPNSNGSSRIIASDGSECIVSV 62
Query: 63 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYH-SSQAFDL 121
K+++ D D+ K+E VD + R + SI++ + + ++ D
Sbjct: 63 KSKVIDHTIDNDDLIKVE--VDIAGQ-------RDDSAVVESINSLLSKVLKPNADTLDT 113
Query: 122 KQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQ 181
+L + + K +KLYVD+L+L N +S A +AL T +P + + D +L
Sbjct: 114 SKLQLTK-KYSFKLYVDVLVLSSYSNPISLISFAIYSALSTTTLPKLVSGFDDLEVEELP 172
Query: 182 LSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIV 228
D YD L++ S PL+ L +G+ ++DP++ E + LIV
Sbjct: 173 TFHD-YDLVNLELKS-PLVFLLALVGDNLLIDPASNEYEVANNGLIV 217
>UniRef50_A5K2Q0 Cluster: Exosome complex exonuclease, putative;
n=4; Plasmodium|Rep: Exosome complex exonuclease,
putative - Plasmodium vivax
Length = 518
Score = 75.4 bits (177), Expect = 2e-12
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 10/220 (4%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
+++ R DGR D R + + + H G+ + + +T ++ I +EI P +P+ G
Sbjct: 15 LKKKLRLDGRKFEDSRNISIYF-LGEH--GNVEVSIGHTKVICKITSEIVKPFDKRPNEG 71
Query: 78 KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYV 137
I+ +D + + + I N ++R SS +L+ LCI+ K+ W L V
Sbjct: 72 IIKVNLDIDSFTNVNDNSQISDECLE-IKNLIERILKSSNLLNLESLCIIPHKKVWCLLV 130
Query: 138 DILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSA 197
+I+++E GNL+D+ L+ + L + R + + GN+ ++ + Y L + +
Sbjct: 131 NIIVIENDGNLYDSCYLSAYSGLVHYRNN--EVTVDSSGNIIIEEGETNY--TPLSIHNT 186
Query: 198 PLLVTLCKIG--EKCVVDPSAEEESCSVISLIVGITGNSK 235
P+L T + C++DPS EE L V + N K
Sbjct: 187 PILTTFAYFNCEDICLIDPSIHEEEFMSSKLSVALNKNGK 226
>UniRef50_Q4UI91 Cluster: Exosome ribonuclease PH (Rrp42 homologue),
putative; n=2; Theileria|Rep: Exosome ribonuclease PH
(Rrp42 homologue), putative - Theileria annulata
Length = 268
Score = 73.3 bits (172), Expect = 6e-12
Identities = 57/237 (24%), Positives = 105/237 (44%), Gaps = 13/237 (5%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
F+ + + R DGR + + ++ S A GS+++ + + + I +P+
Sbjct: 3 FVKSAISSNLRLDGRKFEQLYSLNIIPNISSIAHGSSQVTFGDNIVQTTVNFSIVSPEDS 62
Query: 73 KPDMGKIEFFVDCSANATPEFEGRG-GENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQ 131
PD G +D + T FE + + N + DLK LCI+ G+
Sbjct: 63 TPDEG----IIDLTITGTNIFENSELSQRNYEILCNILYDLEFQHAFLDLKSLCILPGQL 118
Query: 132 CWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMD------GGNVDLQLSDD 185
CW + + +++ GG + DA+S+ ++L + +P V+ + D N+ L+LS D
Sbjct: 119 CWNIRIHSTVVKRGGCVIDALSIGVLSSLMCSDVPDVEVMFRDELESYQRSNLQLKLSLD 178
Query: 186 PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCS--VISLIVGITGNSKSYCAD 240
V PL+ ++ K+ + + + EEE CS +S+ V TG S A+
Sbjct: 179 KNKIISQLVERFPLITSVGKVSKNYLWGMTREEELCSDGTMSVAVDKTGKCLSVKAN 235
>UniRef50_Q59X53 Cluster: Potential exosome component Rrp45p; n=1;
Candida albicans|Rep: Potential exosome component Rrp45p
- Candida albicans (Yeast)
Length = 337
Score = 72.1 bits (169), Expect = 1e-11
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNI-------DYRPMELETDVVSHASGSARLRLANTDI 58
LS +K +++ ++ + R +N +RP++++ + GS L L T +
Sbjct: 5 LSLNQKNYLIQALKSNIRLSTSTNTGGSRKFNQFRPIDIKLSNTRY--GSVELSLGKTKV 62
Query: 59 LVGIKTEIDTPKPDKPDMG------KIEFFVDCSANATPEFEGRGGENLASSISNTMQRA 112
+V I + I P D+P G +I + +N T + + I+ + RA
Sbjct: 63 MVNITSRITEPYQDRPFEGIMTINCEIPNHIKLQSNDTTNNNNDNEDEFINLINRALDRA 122
Query: 113 YHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
S A DL+ LCI+ G++ W+L +D+ +L GNL D+ LA AL + + P
Sbjct: 123 IRRSNAVDLENLCIIAGEKVWELIIDLQVLNYDGNLIDSGCLAIITALLDFKKP 176
>UniRef50_Q4P345 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 332
Score = 71.7 bits (168), Expect = 2e-11
Identities = 42/145 (28%), Positives = 72/145 (49%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R DGR +R + +S A GS+ +R+ NT + IK E+ TP+ +P G +
Sbjct: 31 REDGRPLAAFRDATITLGSISTADGSSFVRIGNTSCIAAIKAEVATPQLSRPREGYLIPN 90
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
V+ A + +F+ + A +++ + +SS D + LCI + W LY+DI +
Sbjct: 91 VELPAVCSSKFKPGAPGDEAQVLTSRLLALLNSSNLLDRQLLCIQDAIAVWCLYLDISFI 150
Query: 143 ECGGNLFDAVSLATKAALFNTRIPL 167
GN DA LA +AL +++ +
Sbjct: 151 CFDGNAMDAAVLAAVSALSDSKFAI 175
>UniRef50_A2ZJR3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 385
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 132 CWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKF 191
CW LY+D L++ GNL DA++ A K AL +T IP V L + + ++ +F
Sbjct: 250 CWDLYIDGLVVSSDGNLLDALAGAIKVALSDTGIPKVNVSLSATTDEEPEVDVSDEEFLQ 309
Query: 192 LDVGSAPLLVTLCKIGEKCVVDPSAEEES--CSVISLIVGITG 232
D S P++VTL K+G+ +VD ++EEES S +S+ V G
Sbjct: 310 FDTSSVPVIVTLTKVGKHYIVDATSEEESQMSSAVSVSVNRHG 352
Score = 38.7 bits (86), Expect = 0.16
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASG 47
LS EK FI G+ +D R+DGR + +R + +ET V+ G
Sbjct: 4 LSEGEKHFIRGGIAQDLRTDGRRRLQFRAISVETGVIPQVFG 45
>UniRef50_Q5CYG9 Cluster: RRP45-like archaeo-eukaryotic exosomal
rnase, PH domain; n=2; Cryptosporidium|Rep: RRP45-like
archaeo-eukaryotic exosomal rnase, PH domain -
Cryptosporidium parvum Iowa II
Length = 432
Score = 71.3 bits (167), Expect = 2e-11
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 22/240 (9%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
FIV + R DGR+ +YR +++ ++ G + + T +L +K+E+ P +
Sbjct: 28 FIVSVREYGLRLDGRTMNEYRNVKIN---LNKNYGEVEVNIGRTHVLSVVKSELVAPSQE 84
Query: 73 KPDMGKIEFFVDC---SANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEG 129
+ G I F VD S N T L + I+N ++R + A D + LCI+ G
Sbjct: 85 RSSEGFISFTVDIGPLSINPTSHAFRHNRTTLGTEIANYIERILKETGAIDTEILCILSG 144
Query: 130 KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRI------PLVKALLMDG-GNVDLQL 182
W + +I +L GNLFDA +AT + L + R +K +G G D Q
Sbjct: 145 VCVWSVKCEIHVLFDDGNLFDACLMATLSGLKHYRYNEIDVDSFLKKSKCEGFGERDYQR 204
Query: 183 SDD---PYDFKFLDVGSAPLLVTL----CKIGEKCVVDPSAEEESCSVISLIVGITGNSK 235
++ + +V PL +++ K G +VDP+++EES S I+ I+ N K
Sbjct: 205 LENTIRKLEMIPFNVHHFPLSISIGYINGKEGLSYIVDPNSDEESIS--DTIIHISINDK 262
>UniRef50_Q5KKS4 Cluster: Exosome complex exonuclease rrp45,
putative; n=1; Filobasidiella neoformans|Rep: Exosome
complex exonuclease rrp45, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 281
Score = 68.5 bits (160), Expect = 2e-10
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 8 STEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEID 67
S + F++ + E R DGR + R + + G RL T IL + I
Sbjct: 9 SVQNEFLLAALAEGKRLDGRLPLQMRDVHY---IFGDELGCVECRLGKTAILAQVSATIV 65
Query: 68 TPKPDKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDLKQLCI 126
P+ D+P G + + A+ +E GR G++ I ++++ ++A D + LCI
Sbjct: 66 KPRDDRPYEGFLLINSEIGPMASSVYENGRPGDDEVM-IGRLLEKSIRRTEAIDREALCI 124
Query: 127 VEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKAL 171
+ G++ W+L + + L GNL D +LA AAL + R P V+ +
Sbjct: 125 LAGEKVWQLRLTLHFLSDSGNLLDCAALAGMAALKHFRKPDVEVI 169
>UniRef50_Q54CU6 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 293
Score = 67.3 bits (157), Expect = 4e-10
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 19/242 (7%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI-DTPKPDKPDMGKIE- 80
R DGRS D R + T ++ A GS+ +++ +T ++ G++ E+ + P DK +
Sbjct: 22 RPDGRSLDDIRKTTISTGSITTADGSSFVKIGSTSVVCGVRAEVGEKPSIDKSKFSTLNV 81
Query: 81 -----FFVDCSAN--ATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCW 133
F++ + F ++A S+ + + + + + EGK W
Sbjct: 82 HENKNIFINIELGPICSNTFSSSKPSDIAMSLCSRLNSLINRLEIPETDYYFDEEGKALW 141
Query: 134 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLD 193
LYVD+ L+ GN++DA L+ +AL N ++P K ++ N D D + L+
Sbjct: 142 YLYVDVYCLDYDGNIYDAAVLSIISALKNVKLP--KGII---ENNDEFYKDLESPQRKLN 196
Query: 194 VGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNS-KSYC--ADKGASNITDVD 250
+ + ++ I + + DPS +EE S S + IT N C G S I+ +
Sbjct: 197 IQHYLIPLSFSVIDDYILADPSLDEEKLS--SGTINITYNELNEICLLLSSGTSLISKTN 254
Query: 251 IK 252
+K
Sbjct: 255 LK 256
>UniRef50_A5DZH2 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 341
Score = 67.3 bits (157), Expect = 4e-10
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 3/162 (1%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
L++ EK F+ ++ R +GRS + R + + + G + +T + V I
Sbjct: 7 LTANEKHFLHTALKSQLRLNGRSLMQLRDISIYLSPTEY--GYVEVSFGSTKLSVRISAS 64
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEG-RGGENLASSISNTMQRAYHSSQAFDLKQL 124
I P D+P G + S A+ +F+ R + IS ++++ S A DL+ L
Sbjct: 65 ITKPYEDRPFEGIFVINSEISPMASLKFDTTRSQQQDEVLISRIIEKSIRRSNALDLENL 124
Query: 125 CIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
CI+ G+QCW++ D+ G + D AT AL + + P
Sbjct: 125 CIIAGEQCWEITADLNFWNYDGGMIDIGCFATMLALSHFKKP 166
>UniRef50_A2F1F8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 263
Score = 66.9 bits (156), Expect = 5e-10
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 18/236 (7%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLAN----- 55
M L LS E+ F + + R DGR + R E+E + + + S ++ +
Sbjct: 1 MQTLTLSPGERTFQCEMLARNMRMDGREFLQSRTHEIELNPLPLSPSSCKVIKGHGYSNT 60
Query: 56 TDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGEN--LASSISNTMQRAY 113
T+++V I TE+ + EF D S + P G E+ + I T++
Sbjct: 61 TEVIVSINTEVALNE-------HAEF--DLSVKSLPGAFGPNLEDAEICQVIKTTIKHFL 111
Query: 114 HSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLM 173
+S+ + Q + WK+Y+D+LIL+ G +++A L ++ L N P +
Sbjct: 112 VNSEVLEPNQFILFNSPYSWKIYIDVLILKAAGGVYEASMLGIESCLQNITFPALIVTPG 171
Query: 174 DGGN-VDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIV 228
+ N + + + + V P L T +K ++DP+ E + SV SLIV
Sbjct: 172 ESANELHFDIDESKKAEHLIKVEKIPKLYTFAAYQDKLIIDPTPAEVT-SVQSLIV 226
>UniRef50_Q8ID62 Cluster: Exosome complex exonuclease, putative;
n=1; Plasmodium falciparum 3D7|Rep: Exosome complex
exonuclease, putative - Plasmodium falciparum (isolate
3D7)
Length = 477
Score = 66.5 bits (155), Expect = 7e-10
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 15/222 (6%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
++++ R DGR+ D R + + G + + T ++ I +EI P K G
Sbjct: 15 IKKNIRLDGRTFEDSRNVCIN---FLKDYGHVEISIGFTKVICKITSEIVKPHDRKLKEG 71
Query: 78 --KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKL 135
KI +D + E L I N + R +S + + LCI+ GK+ W +
Sbjct: 72 ILKINLDIDNFIEDNENSDNMSDECL--EIKNIIDRVLKTSNIINFESLCIIPGKKVWCI 129
Query: 136 YVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVG 195
++I+++E GNL DA L+ L + + V+ + N D+ + + ++ L +
Sbjct: 130 CINIMVIENDGNLTDACYLSAYCGLVHFKNHQVRVI----KNGDIIIDKEEINYSPLSIL 185
Query: 196 SAPLLVTLCKIGEK--CVVDPSAEEES--CSVISLIVGITGN 233
++P++ T E C++DP EE S IS+ + GN
Sbjct: 186 NSPIVTTFAYYEEHDVCLIDPCLHEEEFMSSKISIALNKNGN 227
>UniRef50_Q4PFY5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 327
Score = 66.5 bits (155), Expect = 7e-10
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
S TE F+V + + R DGRS + R +++ G+ + + T + ++ +
Sbjct: 10 SETESDFVVSCLSDGVRPDGRSFLSTRDVDIS---FGEELGNCTVAIKGTRVSTCVRATL 66
Query: 67 DTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASS------ISNTMQRAYHSSQAFD 120
P+ D+P G ++ D S A E++ GG +S+ + +A ++A D
Sbjct: 67 MPPRSDRPYEGFLQITTDISPMAGIEYDSTGGGANSSARAREVLFDRLIDKAVRRTEAVD 126
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
+ LC+V G+Q W +++ + +L G DA L + +L + R P + +G V L
Sbjct: 127 REALCVVAGEQVWNVHLTVHLLSDTGAALDAAVLCSMLSLRHFRRP--DYSIENGNQVRL 184
Query: 181 QLSDDPYDFKFLDVGSAPLLVT 202
D+ L + PL VT
Sbjct: 185 YSLDERVPVP-LAIHHTPLCVT 205
>UniRef50_A2R0H9 Cluster: Contig An12c0290, complete genome; n=1;
Aspergillus niger|Rep: Contig An12c0290, complete genome
- Aspergillus niger
Length = 285
Score = 66.1 bits (154), Expect = 9e-10
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 19 QEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGK 78
Q R++GR+ +R T ++H +GSA +R+ T + G E++ P+ D+ + +
Sbjct: 40 QPSIRANGRAPSQFRVTSANTGSLTHTNGSAVVRVGGTTAVCGDDAEVEDPE-DETHIQQ 98
Query: 79 IEFFV---DCSANATPEF-EGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWK 134
+ V S P F G LA S+S+ + HS++ L++ E K W
Sbjct: 99 LNLLVPNLSLSTGCAPGFVPGAPPSALAQSLSHKILNLLHSTK---LEK----EIKAFWV 151
Query: 135 LYVDILILECGGNLFDAVSLATKAALFNTRIP 166
LY+DI+I+ GN FDA + AAL +T++P
Sbjct: 152 LYIDIMIISLAGNPFDAAWASVLAALRDTKLP 183
>UniRef50_UPI000049A2AB Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 265
Score = 64.1 bits (149), Expect = 4e-09
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 14/246 (5%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
+Q+ R D R ++R E V GS + N+ L E P +PD G
Sbjct: 8 LQKGIRIDARRLDEFR----EVSFVCREPGSVETHIGNSKALGECVVEPVCPGRSRPDQG 63
Query: 78 KIEFFVDCSANATPEF-EGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLY 136
V+ A P F + RG +L I ++R S++A D+ L I+ GK WK+
Sbjct: 64 IFNIRVNFLEMANPNFYDSRGPRDLIE-IGKVVERGLLSTRAIDVDGLVIIRGKLVWKIT 122
Query: 137 VDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGS 196
V + I+ GNL D VS+ +AL + + + + G +V + ++ L +
Sbjct: 123 VCVHIINDCGNLMDLVSITAISALLTA---VRREVQICGTDVKILTPEERKPVP-LAIHH 178
Query: 197 APLLVTLCKIGEKCV--VDPSAEEESCSVISLIVGITGNSKSYCADKGASNIT-DVDIKC 253
P+ V+ I E V +DPS EES L + I + K + I+ V KC
Sbjct: 179 IPITVSF-GITESGVPLLDPSEREESVCKSHLTIAINKEGEVCAVQKSGTPISMKVIQKC 237
Query: 254 STISMN 259
+++
Sbjct: 238 CDTALS 243
>UniRef50_Q12277 Cluster: Exosome complex exonuclease RRP42; n=5;
Saccharomycetales|Rep: Exosome complex exonuclease RRP42
- Saccharomyces cerevisiae (Baker's yeast)
Length = 265
Score = 63.3 bits (147), Expect = 6e-09
Identities = 54/226 (23%), Positives = 109/226 (48%), Gaps = 16/226 (7%)
Query: 6 LSSTEKVFIVHGVQE--DFRSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILVGI 62
LS EK ++ + R DGR +RP+E+ TD + ++GS+R+ ++ ++ +V I
Sbjct: 3 LSVAEKSYLYDSLASTPSIRPDGRLPHQFRPIEIFTDFLPSSNGSSRIIASDGSECIVSI 62
Query: 63 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLK 122
K+++ + ++ VD + R + +I++ + + S D
Sbjct: 63 KSKVVDHHVENE---LLQVDVDIAGQ-------RDDALVVETITSLLNKVLKSGSGVDSS 112
Query: 123 QLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQL 182
+L + + K +K++VD+L++ + +S A +AL +T +P + + D +L
Sbjct: 113 KLQLTK-KYSFKIFVDVLVISSHSHPVSLISFAIYSALNSTYLPKLISAFDDLEVEELPT 171
Query: 183 SDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIV 228
D YD LD+ + PL+ L +G ++DP+A E + LI+
Sbjct: 172 FHD-YDMVKLDI-NPPLVFILAVVGNNMLLDPAANESEVANNGLII 215
>UniRef50_O60124 Cluster: Putative exosome complex exonuclease
RRP42; n=1; Schizosaccharomyces pombe|Rep: Putative
exosome complex exonuclease RRP42 - Schizosaccharomyces
pombe (Fission yeast)
Length = 299
Score = 62.9 bits (146), Expect = 9e-09
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANT-DILVGIKTEIDTPKPDKPDMGKIEF 81
R+DGRS RP+ + DV+ +GSAR++ A++ +I++G+K E+ P+ GK
Sbjct: 23 RNDGRSIDQLRPLSGQVDVLPGTNGSARVKWASSVEIVIGVKAEVGDATPEG---GKYVA 79
Query: 82 FVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILI 141
V+ S + + + R + + S +++ +Q ++ LK + W ++VD ++
Sbjct: 80 SVEISPSVS--IQNRETDEIPSFLTSALQDLLNALAVDYLK----FTPSKAWIIHVDAVV 133
Query: 142 LECGG---NLFDAVSLATKAALFNTRIPLVKALLMDG---GNVDLQLSDDPYDFKFLDVG 195
+ N+ A+SLA AL TR+P + + G+ + S++ YD
Sbjct: 134 ILSSSPYENILSALSLAAYLALQTTRLPKISTPNVTDITIGSTKYEPSEE-YDVDSEWEN 192
Query: 196 SAPL--------LVTLCKIGEKCVVDPSAEEESCSVISLIVGI 230
+ PL ++ + I + +VDP+ EE S + ++ +G+
Sbjct: 193 ALPLQGLELMSVIILVSSIDQVIIVDPTIEESSVAQVTYAIGV 235
>UniRef50_Q4UFY0 Cluster: Exosome complex exonuclease, putative;
n=2; Theileria|Rep: Exosome complex exonuclease,
putative - Theileria annulata
Length = 322
Score = 61.7 bits (143), Expect = 2e-08
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMG 77
++ R DGRS Y + ++ D G++ + NT I + EI P ++P+ G
Sbjct: 28 LKNGLRIDGRSLDSYLYVSVDFD---GPPGNSLISFGNTVIFTCVSQEIVEPNSERPNEG 84
Query: 78 KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYV 137
+ F V+ S + G+ + ++ ++ + S DL+ LCI GKQ L V
Sbjct: 85 FLFFNVETSFTSECYEPGKTTDQ-EHNLIYFLENMFKESSCLDLETLCITSGKQVLALRV 143
Query: 138 DILILECGGNLFDAVSLATKAALFNTRIPLVK 169
+ +L+ GNL A S + A+L + R PL++
Sbjct: 144 YVHVLQDDGNLLSACSFSALASLLHYRKPLME 175
>UniRef50_Q0UMF7 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 356
Score = 60.1 bits (139), Expect = 6e-08
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 28/229 (12%)
Query: 31 DYRPMELETDVVSHASGSARLRLAN-TDILVGIKTEIDTPKPDKPDMGKIEFF------V 83
D+R M E DV+ A+GSAR+ L + T+ LVG+K E++ P +P +G E V
Sbjct: 39 DFRSMRAEYDVLPGANGSARIALEDGTEALVGVKAEVE-KTPQRPSLGLHEDAEMRDPDV 97
Query: 84 DCSA----NA----TPEFEG-RGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWK 134
D SA NA + E G R ++L +++ ++ + +S +LK + + WK
Sbjct: 98 DESAGKGQNAWLDMSVEVPGFREDDSLPVFLASMLKESLLASG--ELKDRLYINRRFHWK 155
Query: 135 LYVDILILECGGNL-FDAVSLATKAALFNTRIPLVKA------LLMDGGNVDLQLSDDPY 187
LY+DIL+L + +S+ T AL T +P +K+ L D + + L
Sbjct: 156 LYIDILLLSPPLSYPLALLSMTTHLALLTTLLPALKSEQDEDPLFNDDWDAAVPLYPKNK 215
Query: 188 DFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGITGNSKS 236
K D P+++ +G + DP EE + + L + T S S
Sbjct: 216 GKKLSD--KPPVIILAMAVGPNIIFDPCKEELAVADAVLAIACTNTSSS 262
>UniRef50_Q6C9I2 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 312
Score = 59.3 bits (137), Expect = 1e-07
Identities = 56/223 (25%), Positives = 102/223 (45%), Gaps = 28/223 (12%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANT-DILVGIKTEIDTPKPDKPDMGKIEF 81
R D R +RP++ + + +GSAR+R ++ + +VG+K ++ ++ +E
Sbjct: 22 RPDAREPNQFRPVDAAQNFLPATNGSARIRTSDGGECIVGVKAKV-VKNSSVDELIAVEV 80
Query: 82 FVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILI 141
+D + +P L +S +Q SS D +L + +KL++D L+
Sbjct: 81 DIDDIRDDSP---------LPKLLSAVLQTLILSS--IDTNRLRLTRSNYAFKLHIDALV 129
Query: 142 LECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVG------ 195
L + VSLA AL TR+PL+ + D + ++ + D ++ G
Sbjct: 130 LSHTSFPLNLVSLAIFLALKCTRLPLLVSSANDEEHEEVPVFSDDWEESLALCGGEILAN 189
Query: 196 ---------SAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVG 229
+ PL+ +L +G +VDP+ EEES S + LI+G
Sbjct: 190 NSGSEAISWTPPLVFSLAVVGNNILVDPTHEEESVSDLGLIMG 232
>UniRef50_Q59LD7 Cluster: Potential exosome component Rrp42p; n=4;
Saccharomycetales|Rep: Potential exosome component
Rrp42p - Candida albicans (Yeast)
Length = 330
Score = 58.0 bits (134), Expect = 2e-07
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 30/250 (12%)
Query: 6 LSSTEKVFIVHGVQED--FRSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILVGI 62
LS EK ++ + + R D RS YRP+ +T + ++GSAR+R + ++ +V +
Sbjct: 27 LSPAEKSYLYDSLTQQPIIRPDLRSIHQYRPLVAKTSFLPGSNGSARVRTEDGSECIVSV 86
Query: 63 KTE---IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAF 119
K++ I + ++ G VD + + NL ++N +Q+ + F
Sbjct: 87 KSKVVLISEEEEEQQQQGHNLIEVDIDIVGHRD-DSNYVANLKFQLTNLLQQNF----PF 141
Query: 120 DLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVD 179
++ +L K +KLY+D +I+ +S+A AL TR+PL+ + + D +
Sbjct: 142 EVLKLT---SKYTFKLYIDCIIISHSCYPLSLISIANYLALKTTRLPLLISDVNDEEIAE 198
Query: 180 L-QLSDDPYDFKFLD----------VGSA-----PLLVTLCKIGEKCVVDPSAEEESCSV 223
L SDD + K + GS+ P+ +T+ IG+ ++DPS EEE
Sbjct: 199 LPTFSDDWENAKLIQDYHLNANTRKGGSSTKFQPPIFITIGVIGKNLILDPSFEEEQVLE 258
Query: 224 ISLIVGITGN 233
LI+ N
Sbjct: 259 NGLIISFYNN 268
>UniRef50_Q24GF7 Cluster: 3' exoribonuclease family, domain 1
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: 3' exoribonuclease family, domain 1
containing protein - Tetrahymena thermophila SB210
Length = 270
Score = 57.6 bits (133), Expect = 3e-07
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 13/138 (9%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANT--DILVGIKTEIDTPK 70
FI G + + R DGR N R ++T + A+GS+ + L + +I GIK EI
Sbjct: 12 FIRDGFKINIRGDGRKNDQSREYLIQTGQLKQANGSSFISLNDNSVNIYTGIKVEIGETD 71
Query: 71 PDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAY-----HSSQAFDLKQLC 125
D+ GKI ++ SA T + R EN +S NT+ + Q K LC
Sbjct: 72 NDE---GKIILKIE-SAQRTEQ--NRDQENHINSDKNTLIYLEALLNKYLIQNICKKSLC 125
Query: 126 IVEGKQCWKLYVDILILE 143
IVE K+CW L +D+ ILE
Sbjct: 126 IVEKKKCWILNIDVFILE 143
>UniRef50_Q8X054 Cluster: Related to rRNA processing protein; n=4;
Pezizomycotina|Rep: Related to rRNA processing protein -
Neurospora crassa
Length = 391
Score = 56.0 bits (129), Expect = 1e-06
Identities = 69/280 (24%), Positives = 124/280 (44%), Gaps = 34/280 (12%)
Query: 4 LLLSSTEKVFIVHGVQ--EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILV 60
+LLS E ++ + R DGRS +RP+ ET ++ +GSAR+ A+ T+ +V
Sbjct: 7 VLLSPAELAYLHASLSLTPPIRPDGRSPTQFRPLVAETGILPGTNGSARICFADGTEAIV 66
Query: 61 GIKTEIDTPK-----PDKPDMGKIEFFVDCSAN-----------ATPEFEGRGGENLASS 104
G+K E++ + P + + + +D + N T E G ++ +
Sbjct: 67 GVKAEVERTRTRHDFPSLDESAEDDDDLDDNQNEVIKGDNDWVEMTVEIPGYRDDDAGTV 126
Query: 105 ISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNL-FDAVSLATKAALFNT 163
+ M + K+L I + + WKLY+DIL++ + +SL T AL
Sbjct: 127 FLSAMLSEALLADGEFTKRLWINQ-RFHWKLYLDILLISPPLSYPLPLLSLTTHLALLAA 185
Query: 164 RIPLVKALLMDGGNVDLQLSDDPYDF-KFLDVGS-----------APLLVTLCKIGEKCV 211
R+P +K+ + D + PY + + + GS P+ + + +G +
Sbjct: 186 RLPRLKSEGDEDPLFDDDWAAAPYLYPRPSEKGSKATAPAPAAARPPVTLLVMAVGNNII 245
Query: 212 VDPSAEEESCSVISLIVGITGNSKSYCADKGASNITDVDI 251
DPS EE + + ++L V + G S S +S T +DI
Sbjct: 246 FDPSKEELAVADVALAVSV-GESSSSTTSTTSSKPTAMDI 284
>UniRef50_Q5KFI0 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 332
Score = 54.4 bits (125), Expect = 3e-06
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 5/155 (3%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE-IDTPKPDKPDMGKIEF 81
R+D R RP+++ V A+GS++++L T+++ GIK E ID D K
Sbjct: 28 RNDARPLFASRPIQISYGVFPQANGSSQVKLGETEVVCGIKLEVIDITGQQIKDQEKWRT 87
Query: 82 FVDCSANATPE-FEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDIL 140
V+ + TP+ F +L S++S + S + L I+ K+ ++ ++ +
Sbjct: 88 KVE--VDVTPQAFPSISAPSL-SALSTHLTSIVTSHFIPSIPALPILPNKKYFQPHLHLT 144
Query: 141 ILECGGNLFDAVSLATKAALFNTRIPLVKALLMDG 175
+L GN+ A+ LA +AA + ++P K + G
Sbjct: 145 VLSSSGNIPSALILAARAAFADLKVPKTKVISWAG 179
>UniRef50_Q0ULD2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 368
Score = 54.0 bits (124), Expect = 4e-06
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 40/217 (18%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI----DTP--------- 69
R++ RS +R + T ++HA+GSA +RL NT ++ G++ EI D P
Sbjct: 75 RANARSAHAFRRPGINTGSLTHANGSAVVRLGNTSVVCGVRAEILKEADIPGTNDFSSAI 134
Query: 70 -KPDKPDMGKIEFF------VDCSANATPE-FEGRGGENLASSISNTMQRAYHSSQAFDL 121
D D +I+ V+ S +TP G A S+ M+ SS+
Sbjct: 135 DSEDGDDAEEIDTLRLVVPNVELSTGSTPNHIPGNAPSTFAQSLITRMRSLLVSSRLLRA 194
Query: 122 KQLCIVEG----------------KQCWKLYVDILILECGGNLFDAVSLATKAALFNTRI 165
+ L I+ K W LY+D+ + G+ FDA L+ AAL +T++
Sbjct: 195 RDLRILYTPSANTEDVDEEPQTVVKGYWVLYIDVFFISIDGSAFDAAWLSLLAALRDTKL 254
Query: 166 PLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVT 202
P D + SDDP + K L++ P+ T
Sbjct: 255 P---RAWFDEEFEGILCSDDPVEAKTLELRGLPVPAT 288
>UniRef50_A5DMN2 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 314
Score = 52.8 bits (121), Expect = 9e-06
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 20/222 (9%)
Query: 4 LLLSSTEKVFIVHGVQE--DFRSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILV 60
L+LS E+ F+ + R D R++ +RP+E +T + ++GSAR+RL + ++ +V
Sbjct: 30 LMLSPAERSFLHDSLIRLPPIRPDRRADYQFRPLEAKTGFLPGSNGSARIRLMDGSECIV 89
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
+K+++ + IE VD S + R N S++ ++ + F
Sbjct: 90 SVKSKVVITALES---ALIECDVDISGH-------RDDSNYVSNLKYNLETVL--LENFP 137
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
L + K +KL++D +++ +SLA AL +R+PL+ + + D +
Sbjct: 138 TSCLNLT-SKYSYKLFIDCIVISHALYPLGLMSLACYLALKTSRLPLLISEVNDADIEEQ 196
Query: 181 QLSDDPYD----FKFLDVGSAPLLVTLCKIGEKCVVDPSAEE 218
D +D + P+ + IG + DPSAEE
Sbjct: 197 PTFSDDWDEARNLAEMQDFHPPISIVAGLIGSNILFDPSAEE 238
>UniRef50_Q74ML0 Cluster: NEQ111; n=1; Nanoarchaeum equitans|Rep:
NEQ111 - Nanoarchaeum equitans
Length = 218
Score = 51.2 bits (117), Expect = 3e-05
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
+I + + F D R ++YRP++++ D L L NT ++ G+ + P
Sbjct: 3 YIEQKLMDGFHIDNRPLLEYRPIKIKED-----QNRVWLSLGNTQVIAGLSISEEEPM-- 55
Query: 73 KPDMGKIEFFV--DCSANATPE-FEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEG 129
+ GK V D S A E F+G E ++ + RA SS A L++ I E
Sbjct: 56 --EKGKANLIVNADFSPIAGKEYFQGPPTEQ-DLILARLIDRALRSSNAIALEKHVIDEN 112
Query: 130 KQCWKLYVDILILECGGNLFDAVSLA 155
K Y+D+++LE GN+ DA LA
Sbjct: 113 K-VKSFYIDVIVLEDDGNILDASMLA 137
>UniRef50_A0D7R2 Cluster: Chromosome undetermined scaffold_40, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_40,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 984
Score = 50.8 bits (116), Expect = 4e-05
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 13 FIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPD 72
F++ + R DGR + R +++ +G+ L L T + +P P
Sbjct: 775 FVLEQLTLGKRIDGRDPLQLRM--IQSHFGPQITGAVELSLGETSV------SRMSPNPI 826
Query: 73 KPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQC 132
+P G ++F +D + L I +++ S+A D + LCI+ GK
Sbjct: 827 RPSEGFLKFHLDLQVLRDTGYM-HNPIKLDMEIEKYIEKVIKGSKALDTESLCILSGKNV 885
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFL 192
W + V++ ++ GNL DA+ L + + R P V ++ + G V+++ P L
Sbjct: 886 WSIDVNVALINNDGNLLDAMYLCCIFSQQHFRRPQV-SVSLQGVKVEVEKRLVP-----L 939
Query: 193 DVGSAPLLVT--LCKIGEKCVV--DPSAEEE 219
+ PL +T + ++ E+ ++ D EEE
Sbjct: 940 SIHHIPLSLTQAILELNEQTILLQDSCLEEE 970
>UniRef50_Q583T6 Cluster: Ribosomal RNA processing protein 45; n=2;
Trypanosoma brucei|Rep: Ribosomal RNA processing protein
45 - Trypanosoma brucei
Length = 363
Score = 50.4 bits (115), Expect = 5e-05
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 8/168 (4%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
+A L+ E F R D R+ R + +E ++S +R + +
Sbjct: 10 IASPALTQREVEFTKSAWLAGLRPDQRTAQQMREVSVEFPLLSR--DVVVVRCGGSVVTA 67
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDC--SANATPEFEGRGGENLASSISNTMQRAYHSSQA 118
I T + P P +P G + F V + +P +G +NL + + +R +
Sbjct: 68 AIATALVEPTPQRPKHGLLHFSVRRLHTERDSPAADGSTQKNLVAFL----ERLVRTGGV 123
Query: 119 FDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
D LC++ G++ W L VD+ I+ GN DA A A L + R P
Sbjct: 124 IDTAGLCVLPGQKVWSLTVDVTIMNDEGNCNDAAVWAVIALLMHHRRP 171
>UniRef50_Q4D743 Cluster: Ribosomal RNA processing protein 45,
putative; n=2; Trypanosoma cruzi|Rep: Ribosomal RNA
processing protein 45, putative - Trypanosoma cruzi
Length = 334
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 51 LRLANTDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQ 110
+R T + I E+ P P +P G I+F V E + ++ ++
Sbjct: 59 VRCGGTIVTAAIACELVEPFPYRPKHGIIDFSV---RQPYTERDSSAKTAELKKLTAFLE 115
Query: 111 RAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
R D + LC++ G++ W + VD+ +L GN+ D AT A L + R P
Sbjct: 116 RLIKGGGVVDTEGLCVLPGRRVWSISVDVTVLNDEGNVTDVAVWATVAVLLHYRRP 171
>UniRef50_A2DPV1 Cluster: Nucleolar autoantigen-like protein,
putative; n=1; Trichomonas vaginalis G3|Rep: Nucleolar
autoantigen-like protein, putative - Trichomonas
vaginalis G3
Length = 315
Score = 48.0 bits (109), Expect = 3e-04
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 107 NTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
N ++ + + A DL+ L I GK W+L +I+ILE G LF+A++LA L T++P
Sbjct: 97 NAVRDMFKMNNALDLESLVIQIGKLVWELKCEIVILENDGGLFEAMTLAVGCGLLATKLP 156
>UniRef50_A5ATT2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 105
Score = 46.8 bits (106), Expect = 6e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 120 DLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLV 168
+LK+L +V GK W Y+++ L+ G+L DA LA AA + RIP+V
Sbjct: 3 NLKELSLVSGKTAWMAYLEVYCLDAYGSLLDAALLAVVAAFSHLRIPVV 51
>UniRef50_A1C6Z1 Cluster: 3' exoribonuclease family protein
(Rrp42), putative; n=9; Pezizomycotina|Rep: 3'
exoribonuclease family protein (Rrp42), putative -
Aspergillus clavatus
Length = 391
Score = 46.4 bits (105), Expect = 8e-04
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILVGIKTEID 67
R DGRS+ +RP+ ETD++ +GSAR+ A+ T +VG+K E++
Sbjct: 36 RPDGRSSTQFRPLSAETDILPGTNGSARVGFADGTQAIVGVKAEVE 81
Score = 34.3 bits (75), Expect = 3.4
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 115 SSQAFDLKQLCIVEGKQCWKLYVDILILECGGNL-FDAVSLATKAALFNTRIPLVKA 170
+ A LK ++ + W+LY+D+L+L + +SL T AL +TR+P +K+
Sbjct: 159 AEMAGGLKGRLVINRRWHWRLYIDVLLLSQPLSYPLPLLSLTTHLALLSTRLPKLKS 215
>UniRef50_A6RAF2 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 337
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLAN-TDILVGIKTEI 66
R+DGR+ +RP+ ETD++ A+GSAR+ A+ T +VG+K EI
Sbjct: 36 RTDGRAATQFRPLTAETDILPGANGSARIGFADGTQAIVGVKAEI 80
>UniRef50_A7SQ50 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 225
Score = 45.6 bits (103), Expect = 0.001
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 14/182 (7%)
Query: 63 KTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLK 122
K E P D P+ G I VD +P F A +S + + ++ +L
Sbjct: 16 KKEFAEPAADVPNKGFIVPNVDLPPLCSPSFRPGPPSEHAQVLSTFIDNLI-TKRSMELL 74
Query: 123 QLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQL 182
Q W LY+D++ L+ GN+ DA +A AAL NTR+ V N + +
Sbjct: 75 QHAKY---LVWVLYIDLMCLDYDGNVADAAVIAMLAALQNTRLHTVTI------NEETE- 124
Query: 183 SDDPYDFK--FLDVGSAPLLVTLCKIGEKCV-VDPSAEEESCSVISLIVGITGNSKSYCA 239
+ +P + K L + S P+ VT + + DP+ EEE + + V +T N+K
Sbjct: 125 TPEPSENKDIHLKLKSMPVAVTFGIFDDDHIYCDPTDEEERLASGKVSVVMTTNNKVVAV 184
Query: 240 DK 241
K
Sbjct: 185 HK 186
>UniRef50_A1CMV2 Cluster: 3' exoribonuclease family protein; n=5;
Eurotiomycetidae|Rep: 3' exoribonuclease family protein
- Aspergillus clavatus
Length = 416
Score = 45.6 bits (103), Expect = 0.001
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 128 EGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPY 187
E K W LY+D++I+ GN FDA A AAL +T++P KA D N + SD
Sbjct: 237 EIKAFWVLYIDVMIISLAGNPFDAAWTAVLAALRDTKLP--KA-WWDIDNEMVVCSDAVA 293
Query: 188 DFKFLDVGSAPLLVTLC------KIGEKCVVDPSAEEE 219
+ + L + P+ + C G + V+ P AEEE
Sbjct: 294 EARKLSLRGMPIASSFCVFEADAAAGWRKVIVPDAEEE 331
Score = 34.7 bits (76), Expect = 2.6
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 19 QEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
Q R++GR+ +R T ++H +GSA +R+ +T + G++ E+
Sbjct: 45 QPSVRANGRATSQFRITSANTGSLTHTNGSAVVRIGDTAAVCGVRAEL 92
>UniRef50_Q01CP9 Cluster: Exosc8 protein; n=2; Ostreococcus|Rep:
Exosc8 protein - Ostreococcus tauri
Length = 294
Score = 45.2 bits (102), Expect = 0.002
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 8/142 (5%)
Query: 120 DLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP--LVK--ALLMDG 175
DL LCI G W+L +D+++L+ G DA A AAL + +P VK +++
Sbjct: 129 DLSDLCIERGVFAWRLMLDVVVLDDDGAAADAALSAAVAALRDVVLPEATVKRGKIVIGD 188
Query: 176 GNVDLQLSDDPY-DFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCS--VISLIVGITG 232
+ +DD L+V + P+ +T E +VDP+ EE+ S +S+++ G
Sbjct: 189 EEEGVDGADDGMRKGTPLNVRTTPVCLTTALYKEHLLVDPTHAEEALSECEVSVVLTEDG 248
Query: 233 NSKSYCADKGASNIT-DVDIKC 253
+ + G T D+ +KC
Sbjct: 249 MIRGVFKNGGEVEATEDILMKC 270
>UniRef50_A1DL29 Cluster: 3' exoribonuclease family protein; n=3;
Eurotiomycetidae|Rep: 3' exoribonuclease family protein
- Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 /
DSM 3700 / NRRL 181))
Length = 411
Score = 42.7 bits (96), Expect = 0.010
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 128 EGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPY 187
E K W LY+D++I+ GN FDA A AAL +T++P KA D N + S+
Sbjct: 232 EIKAFWVLYIDVMIISLAGNPFDAAWAAVLAALRDTKLP--KA-WWDVDNEMVVCSEAVS 288
Query: 188 DFKFLDVGSAPLLVTLCKI------GEKCVVDPSAEEE 219
+ L + P+ + C G + V+ P AEEE
Sbjct: 289 EAHKLSLRGMPVASSFCVFEADAASGWRKVIIPDAEEE 326
Score = 36.3 bits (80), Expect = 0.85
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 19 QEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
Q R++GR+ +R T ++H +GSA +R+ +T + G++ EI
Sbjct: 45 QPSIRANGRATSQFRVTSANTGSLTHTNGSAVVRIGDTAAVCGVRAEI 92
>UniRef50_Q4QBI9 Cluster: Exosome complex exonuclease RRP45 homolog,
putative; n=3; Leishmania|Rep: Exosome complex
exonuclease RRP45 homolog, putative - Leishmania major
Length = 363
Score = 41.9 bits (94), Expect = 0.017
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R D R R +E++ ++S +++ NT I ++ P P +P G FF
Sbjct: 31 RPDQRDANQLRVVEIDFPLLSR--DVVQVKCGNTVATATISCDLVEPSPYRPKHG---FF 85
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
+ E + IS + R S + + LC++ G++ W + +++I+
Sbjct: 86 EVHARQLLNERDPLDQSKEIKRISMYLTRLL-SGSVLETESLCVIPGRRVWSIDAEVIIV 144
Query: 143 ECGGNLFDAVSLATKAALFNTRIP 166
GN D A AL + R P
Sbjct: 145 NNDGNAQDVAQWAVMTALQHVRRP 168
>UniRef50_Q2H4W8 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 210
Score = 41.9 bits (94), Expect = 0.017
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
R++GR + RP+ +T +SHA GS+ +RL +T +L G++ E+
Sbjct: 38 RTNGRGTQETRPLHAKTSSLSHAHGSSLVRLGDTTVLCGVRGEL 81
>UniRef50_UPI0000D569CA Cluster: PREDICTED: similar to CG8025-PA;
n=2; Endopterygota|Rep: PREDICTED: similar to CG8025-PA
- Tribolium castaneum
Length = 282
Score = 41.5 bits (93), Expect = 0.023
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP-KPDKPDMGKI 79
R+DGR++ ++R + L+T VVS A GSA + L T ++V + + P K D G+I
Sbjct: 42 RADGRTSTEHRKIFLKTGVVSQAKGSAYIELDQTKVIVSVFDPREIPNKTDYSSKGEI 99
>UniRef50_A2F1P7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 329
Score = 41.5 bits (93), Expect = 0.023
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 17/213 (7%)
Query: 6 LSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTE 65
LS+ E ++ R DGR + R + ++ ++ + G A ++L NT +
Sbjct: 3 LSNNEFEAYTLALKAGIRGDGRRFDESRKLIVQ-EITT--PGVANVQLGNTRVTAITTAR 59
Query: 66 IDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLC 125
+ P P G ++ N TP ++ A + + + S + + + LC
Sbjct: 60 LAMPALSTPKKGTHNIYI---FNDTPV-----QKSTAEAFQTYFRMIWKSCRILEDESLC 111
Query: 126 IVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDD 185
+ G++ W L ++I + G + +A A A+L + R P A N + S
Sbjct: 112 VKVGEKVWMLTTRLIIHDDDGGILEAGFAAILASLGSLRFPSFDA------NTGVLFSPL 165
Query: 186 PYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEE 218
+ + G +LVT+ +K V DP++ E
Sbjct: 166 HHRVHKIAFGVRAILVTVSFFEDKIVADPTSVE 198
>UniRef50_Q4QCR0 Cluster: RNasePH-like protein (Exosome associated
protein 1 (Rrp42 homologue), putative); n=2;
Leishmania|Rep: RNasePH-like protein (Exosome associated
protein 1 (Rrp42 homologue), putative) - Leishmania
major
Length = 406
Score = 41.1 bits (92), Expect = 0.030
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 135 LYVDILILEC-GGNLFDAVSLATKAALFNTRIPLVKALLM--DGGNVDLQLS-DDPYDFK 190
++VD+ +L+ GGNLF A++ A A L + R+P V DG V +++ PY +
Sbjct: 228 IHVDVHVLQSSGGNLFTAIAYAIHAVLRSLRLPAVTLHKAPGDGAGVSVEVDRSKPYR-Q 286
Query: 191 FLDVGSAPLL-VTLCKIGEKCVVDPSAEEE 219
+ PLL V L CVVDP+ EE
Sbjct: 287 AVSWTHMPLLCVLLVSPTGHCVVDPTLREE 316
>UniRef50_Q7SEX2 Cluster: Putative uncharacterized protein
NCU03159.1; n=6; Fungi/Metazoa group|Rep: Putative
uncharacterized protein NCU03159.1 - Neurospora crassa
Length = 357
Score = 41.1 bits (92), Expect = 0.030
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
R++GR+ + RP+ + T ++HA+GSA +R +T ++ G++ EI
Sbjct: 38 RTNGRAPHEARPVHIHTSSLAHANGSALVRTGDTTVVCGVRAEI 81
Score = 38.7 bits (86), Expect = 0.16
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 128 EGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
E K W LY+D+L + GN FDA A AAL +T++P
Sbjct: 197 ELKAYWVLYIDLLFVSFDGNPFDAAWTAVMAALRDTKLP 235
>UniRef50_Q4Q4S6 Cluster: Exosome-associated protein 2, putative;
n=4; Leishmania|Rep: Exosome-associated protein 2,
putative - Leishmania major
Length = 312
Score = 40.7 bits (91), Expect = 0.040
Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 119 FDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVK---ALLMDG 175
FDL QL I G+ CW L V +L+L G L A AAL +P ++ +++G
Sbjct: 167 FDLSQLSIYAGEACWVLKVSVLLLSVDGGLRAGSLHAALAALHKLHLPRIRLPNGDVIEG 226
Query: 176 GNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGE 208
V L F FL L+ I E
Sbjct: 227 RQVQLSCMPVACTFGFLAGAQVRLVADTTAIEE 259
>UniRef50_Q5CZ14 Cluster: RPR45-like archaeo-eukaryotic exosomal
RNAse PH; n=2; Cryptosporidium|Rep: RPR45-like
archaeo-eukaryotic exosomal RNAse PH - Cryptosporidium
parvum Iowa II
Length = 291
Score = 40.3 bits (90), Expect = 0.052
Identities = 39/173 (22%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHAS-GSARLRLANTDILVGIKTEIDTPKPDKPDM 76
+++ R DGR R +LE + +S ++ G+ +R+ N+ + +I D+
Sbjct: 19 LEQGVRCDGRKPEVCRNFKLELNELSSSNYGAVSVRIGNSSYIACCSPQIIHTGLDQESN 78
Query: 77 GKI-EFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCI-VEGKQC-W 133
I ++ S G N ++ +SN++ + S+ + + +GK+ W
Sbjct: 79 NAITNTRINVSLELPTICGFTGNPNHSNFVSNSITECLNDSRIINKEAFITKFQGKELHW 138
Query: 134 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDP 186
+ + ++ L GN D +A+ A+L NT +P K L+ D ++S DP
Sbjct: 139 LIDIKVVCLSYDGNPLDYTLIASIASLRNTILP--KNLVWDDDYNWFRISSDP 189
>UniRef50_Q22RD5 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 261
Score = 39.9 bits (89), Expect = 0.069
Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 6/107 (5%)
Query: 133 WKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFL 192
W++ +++ ++ GNL DA+ LA + LFN ++ +DG + L++ +D K L
Sbjct: 90 WEIKLNLRVVNNDGNLLDALLLAAQFELFNCQVNQTVVKTIDGA-LQLEIIEDKK--KHL 146
Query: 193 DVGSAPLLVTL-CKI--GEKCVVDPSAEEESCSVISLIVGITGNSKS 236
+ L + C + E +VDPS E+ S ++ V + N+KS
Sbjct: 147 EFNIEDFLYPVQCSLFQNEVIIVDPSNFEQEYSEANIQVISSLNNKS 193
>UniRef50_A0D415 Cluster: Chromosome undetermined scaffold_37, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_37,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 233
Score = 39.9 bits (89), Expect = 0.069
Identities = 52/218 (23%), Positives = 93/218 (42%), Gaps = 30/218 (13%)
Query: 5 LLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
+LS+ + FI G+ + RSDGR N + R +L + SGS + I GIK
Sbjct: 1 MLSTGQIEFIKGGIVVNIRSDGRKNNEVRETKLLRSHLICTSGSCKYE-GEITIYTGIKL 59
Query: 65 EIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQL 124
E+ D +I+ V E + A + ++ Y + D+ +L
Sbjct: 60 ELG-------DQSQIKINVSSMKRTNDE------KQKAQYLQELLESLYKT----DMSEL 102
Query: 125 CIVEGKQCWKLYVDILIL-ECGGNLFDAVSLATKAALFNTRIPLVKA---LLMDGGNVDL 180
+ G++ W L V++ +L + +A+ + A+ + +IP +K LL + +L
Sbjct: 103 KV--GQKGWVLVVEVFLLCQIDIAYLEAICTSIYEAMADLKIPTIKVTKNLLTEIEEYEL 160
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEE 218
Q ++ FK + + K+G + V D S EE
Sbjct: 161 QPNEPTKSFK------CDKIYVVGKVGTELVKDMSLEE 192
>UniRef50_UPI00015B4338 Cluster: PREDICTED: similar to exosomal 3-5
exoribonuclease complex subunit Rrp41-like protein; n=1;
Nasonia vitripennis|Rep: PREDICTED: similar to exosomal
3-5 exoribonuclease complex subunit Rrp41-like protein -
Nasonia vitripennis
Length = 284
Score = 39.5 bits (88), Expect = 0.091
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP-KPDKPDMGKIEF 81
R D R + + R M ++ VVS A GSA + + T ++ + P K G+I
Sbjct: 39 RVDSRKHKELRKMFIKLGVVSQAKGSAYIEMGQTKVICSAFDPREIPNKTSYSTQGEIFC 98
Query: 82 FVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILI 141
++ AT + +G + S MQRA + +C E +++ V L+
Sbjct: 99 EFKFASFATCKRKGHQQDTEEKEYSLIMQRALEPA-------VCRHEFPN-FQVDVYALV 150
Query: 142 LECGGNLFDAVSLATKAALFNTRIPLVKAL-LMDGGNVDLQLSDDPYD 188
L+ GG+ A + AL N +P+ + + G D L DP D
Sbjct: 151 LDNGGSALGAAIMGASLALANASVPMFGIVTAVTAGIYDDLLLLDPTD 198
>UniRef50_A5C744 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 674
Score = 39.5 bits (88), Expect = 0.091
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 64 TEIDTPKP-DKPDMGKIEFFVDCSANATPEFE-GRGGENLASSISNTMQRAYHSSQAFDL 121
TEID D D G I V +P GR E A +S + A SS +L
Sbjct: 356 TEIDPDFALDIKDGGSIAIEVCMPPICSPLVRPGRPVEE-APFVSKQLSDAILSSSMINL 414
Query: 122 KQLCIVEGKQCWKLYVDILILECGGNLFDAVS 153
K+L +V GK W Y+D+ L+ G+L A++
Sbjct: 415 KELSLVSGKAAWMAYLDVYCLDAYGSLDAAIA 446
>UniRef50_Q8PTT8 Cluster: Probable exosome complex exonuclease 1;
n=23; Archaea|Rep: Probable exosome complex exonuclease
1 - Methanosarcina mazei (Methanosarcina frisia)
Length = 493
Score = 39.5 bits (88), Expect = 0.091
Identities = 37/150 (24%), Positives = 64/150 (42%), Gaps = 10/150 (6%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGI--KTEIDTPKPDKPDMG 77
+ R DGR + RPM++E V+S A GS L ILVG+ E + + D
Sbjct: 14 DGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRRSQRADSA 73
Query: 78 KIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYV 137
I + + ++ + + G + IS S +AF+ + + K ++V
Sbjct: 74 VIRYRYNMASFSVEDRARPGPSRRSIEISKV------SREAFEPVIMAELFPKTAIDIFV 127
Query: 138 DILILECGGNLFDAVSLATKAALFNTRIPL 167
++L + G A A+ AL + IP+
Sbjct: 128 EVLQADAGTR--TAAINASSIALADAGIPM 155
>UniRef50_A7RQ94 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 268
Score = 38.7 bits (86), Expect = 0.16
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPK 70
R DGR + RPM L VVS A GSA + + NT ++ I + P+
Sbjct: 36 RQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPR 83
>UniRef50_UPI0000498B51 Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 238
Score = 38.3 bits (85), Expect = 0.21
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANT 56
E +R DGR + R E+E + +S A GSAR+R+ NT
Sbjct: 7 EGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNT 43
>UniRef50_A6SAV5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 189
Score = 38.3 bits (85), Expect = 0.21
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 128 EGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIP 166
E K W LY+DIL + GN DA A +AL N R+P
Sbjct: 34 EVKAFWTLYIDILFISLDGNPLDAAWAAVVSALRNVRLP 72
>UniRef50_A2RVK7 Cluster: At4g27490; n=7; Magnoliophyta|Rep:
At4g27490 - Arabidopsis thaliana (Mouse-ear cress)
Length = 256
Score = 37.5 bits (83), Expect = 0.37
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKP-DKPDMGKIEF 81
R DGR RP L+T VS ASGSA NT ++V + ++ K D+G++
Sbjct: 34 RPDGRGFHQCRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRESKKAMVYSDVGRLNC 93
Query: 82 FVDCSANATPEFEGRGGEN 100
V + A+P G+G ++
Sbjct: 94 NVSYTNFASPTL-GQGTDH 111
>UniRef50_Q9Z3R1 Cluster: L-2,4-diaminobutyrate decarboxylase; n=1;
Sinorhizobium meliloti|Rep: L-2,4-diaminobutyrate
decarboxylase - Rhizobium meliloti (Sinorhizobium
meliloti)
Length = 495
Score = 36.7 bits (81), Expect = 0.64
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 97 GGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLAT 156
G + L + I T+Q + +++A ++ + G + + G DA++L T
Sbjct: 378 GRDGLDALICQTLQNTHAAAEAVKTREYLSLAGPPSLSTVLFRYVSARGPKFADAITLKT 437
Query: 157 KAALFNTRIPLVKALLMDG 175
+AALFN I + ++DG
Sbjct: 438 RAALFNAGIAALATTVLDG 456
>UniRef50_Q8G447 Cluster: PnpA; n=37; Bacteria|Rep: PnpA -
Bifidobacterium longum
Length = 913
Score = 36.3 bits (80), Expect = 0.85
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
ED+R DGR D R + E D+V GSA + T IL G+ T
Sbjct: 343 EDYRIDGRGLRDIRTLSAEVDIVPRVHGSALFQRGETQIL-GVTT 386
>UniRef50_Q5CWV7 Cluster: Archeo-eukaryotice exosomal RNAse PH;
n=3; Cryptosporidium|Rep: Archeo-eukaryotice exosomal
RNAse PH - Cryptosporidium parvum Iowa II
Length = 303
Score = 36.3 bits (80), Expect = 0.85
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGI 62
R+D R + RP+ + T V+ +A GSA + NT +L GI
Sbjct: 47 RNDDRQFEELRPITIRTGVIENADGSAYFSIGNTKVLCGI 86
>UniRef50_Q74CS9 Cluster: Polyribonucleotide nucleotidyltransferase;
n=28; Proteobacteria|Rep: Polyribonucleotide
nucleotidyltransferase - Geobacter sulfurreducens
Length = 697
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 16 HGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVG--IKTEIDTPKPD 72
H +++ +R DGR RP+ +E ++ A GSA T LV + T ID + D
Sbjct: 306 HIIKDGYRIDGRDTTTIRPISIEVSMLPRAHGSALFTRGETQALVASTLGTSIDEQRID 364
>UniRef50_Q9RU11 Cluster: Ribonuclease PH; n=2; Deinococcus|Rep:
Ribonuclease PH - Deinococcus radiodurans
Length = 246
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 25 DGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKP 71
+GR + RP+ ++ V HA GSA L++ T+IL + + D P P
Sbjct: 10 EGRDALTPRPVSVQRGVNPHAPGSAHLKMGRTEILATVTLD-DKPAP 55
>UniRef50_Q6P0I8 Cluster: Exosome complex exonuclease MTR3; n=1;
Danio rerio|Rep: Exosome complex exonuclease MTR3 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 271
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/54 (35%), Positives = 27/54 (50%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDM 76
R R N D RP+ +VS A GSA + NT I+ + +T + D+ DM
Sbjct: 33 RQGVRGNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKETERRDETDM 86
>UniRef50_Q7QU07 Cluster: GLP_108_37210_36425; n=1; Giardia
lamblia ATCC 50803|Rep: GLP_108_37210_36425 - Giardia
lamblia ATCC 50803
Length = 261
Score = 35.5 bits (78), Expect = 1.5
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 21 DFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDK 73
+ R DGR +++R + + +S ++GS R RL TD++ + + P K
Sbjct: 4 ELRPDGREKLEHREPTVLFNCISTSTGSVRFRLGGTDLIASVYLDAPQNSPFK 56
>UniRef50_Q6L223 Cluster: Ribonuclease PH; n=2;
Thermoplasmatales|Rep: Ribonuclease PH - Picrophilus
torridus
Length = 239
Score = 35.5 bits (78), Expect = 1.5
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 10/184 (5%)
Query: 20 EDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPK-PDKPDMGK 78
+ R DGR+ + RP+ + T VV +A GSA + I+V + PK D
Sbjct: 10 DGLRLDGRAFNEMRPIRITTGVVDNADGSAYIEWGANKIVVAVYVREAYPKHAQNIDKAI 69
Query: 79 IEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVD 138
++ + + + E + G + IS + A S A +++L E +Y++
Sbjct: 70 VKARYNMAGFSVEERKRPGPDRRTMEISKLISEALES--AIMVERLPRAE----IDVYIE 123
Query: 139 ILILECGGNL--FDAVSLA-TKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVG 195
+L + G + A S+A A + +P+ G V L LS D ++ D+
Sbjct: 124 VLEADAGTRIASLTAASVAVADAGIPMKDLPVGCTAGKANGKVVLDLSKDEDNYGDADIP 183
Query: 196 SAPL 199
A L
Sbjct: 184 MAIL 187
>UniRef50_Q9ZAE1 Cluster: Polynucleotide phosphorylase; n=13;
Bacteria|Rep: Polynucleotide phosphorylase - Thermus
thermophilus
Length = 713
Score = 35.1 bits (77), Expect = 2.0
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDIL 59
++E R+DGR D RP+ +E DV+ A GSA T +L
Sbjct: 322 LEEGKRADGRGPKDLRPIWIEVDVLPRAHGSAVFTRGETQVL 363
>UniRef50_Q0S208 Cluster: Polyribonucleotide nucleotidyltransferase;
n=18; Actinomycetales|Rep: Polyribonucleotide
nucleotidyltransferase - Rhodococcus sp. (strain RHA1)
Length = 757
Score = 35.1 bits (77), Expect = 2.0
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKT 64
S T+K+ +++ FR DGR D R + E +V A GSA T IL G+ T
Sbjct: 341 SLTKKLVRQRILRDQFRIDGRGITDIRSLSAEVAIVPRAHGSALFERGETQIL-GVTT 397
>UniRef50_Q8SVE0 Cluster: Putative uncharacterized protein
ECU06_0390; n=1; Encephalitozoon cuniculi|Rep: Putative
uncharacterized protein ECU06_0390 - Encephalitozoon
cuniculi
Length = 218
Score = 35.1 bits (77), Expect = 2.0
Identities = 47/219 (21%), Positives = 88/219 (40%), Gaps = 26/219 (11%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFF 82
R D R + R +E+E S S + + + +L + P D+P G + F
Sbjct: 12 RFDNRKIEEARRLEVE-----RISNSCLVTMGASQLLTVFQKSTSRPYIDRPHEGIVSFS 66
Query: 83 VDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDILIL 142
V A ++E + N + + Y ++ DL+ LCI ++ +++D+ +L
Sbjct: 67 VSTGAK---KYE---------RLVNFLHKVYIKQKSIDLESLCIRLNEEVVLIHIDLRVL 114
Query: 143 ECGGNLFDAVSLATKAAL--FNTR---IPLVKALLMDGGNVDLQLSDDPY---DFKFLDV 194
G+++ + L R +P GG V S+D D+ + +
Sbjct: 115 SGDGSIYSLAISGVNSVLEALGVRMNYVPQCFFYCSIGGVVVTDPSEDEQNKGDWSCVVI 174
Query: 195 GSAPL-LVTLCKIGEKCVVDPSAEEESCSVISLIVGITG 232
+P +V L K+G +C V+ E S +V + G
Sbjct: 175 MKSPKEVVLLEKMGRECSVEAVLETVYKSAKDSVVEVPG 213
>UniRef50_Q5KWI5 Cluster: Ribonuclease PH; n=82; Bacteria|Rep:
Ribonuclease PH - Geobacillus kaustophilus
Length = 256
Score = 35.1 bits (77), Expect = 2.0
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTP 69
R+DGRS+ + RP+ + + HA GS + + +T ++ E P
Sbjct: 2 RADGRSSCELRPVHIHPHYMKHAEGSVLIEVGDTKVICTATVEEKVP 48
>UniRef50_Q4T603 Cluster: Chromosome undetermined SCAF9013, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF9013, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 276
Score = 34.7 bits (76), Expect = 2.6
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 23 RSDGRSN--IDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDM--GK 78
R+DGR D RP+ + + S A GSA + T +L + +T + D+ DM G+
Sbjct: 34 RADGRQREQADVRPVFVRCGLGSQAKGSAYMEAGATKLLCCVYGPRETERKDETDMRCGR 93
Query: 79 IEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVD 138
+ V + + PE RG S I + R + S L+ + ++ V
Sbjct: 94 LTADVRFAPFSCPE---RG-----SWIQGSQDRDFSSMLLESLQPAVCLHRYPRSQIEVH 145
Query: 139 ILILECGGNLFDAVSLATKAALFNTRIPLVKALL 172
+++LE GG++ AL + I + +L
Sbjct: 146 LVVLENGGSVLAHAVTCASVALADAGIQMYDLVL 179
>UniRef50_Q0J6M3 Cluster: Os08g0296900 protein; n=6; Oryza
sativa|Rep: Os08g0296900 protein - Oryza sativa subsp.
japonica (Rice)
Length = 831
Score = 34.7 bits (76), Expect = 2.6
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 31 DYRPME-LETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANA 89
DY E E + +G R D V +K EI T +P+ +GK ++ +D N
Sbjct: 258 DYEQSEKTELKINGQENGENRAGKEQFDCNVPVKQEIRTDQPEANGVGKHQYHMDDKENK 317
Query: 90 TPEFEGRGGENLASSISNTMQRA 112
+ EG+ G+ S ++RA
Sbjct: 318 GLDKEGKNGKPGKHSAGKKIRRA 340
>UniRef50_Q4N9J5 Cluster: Long-chain fatty acid CoA ligase,
putative; n=2; Theileria|Rep: Long-chain fatty acid CoA
ligase, putative - Theileria parva
Length = 691
Score = 34.7 bits (76), Expect = 2.6
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 150 DAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSDDPYDFKFLDVGSAPLLVTLCKIGEK 209
+A L +L T++PL +L++ +V +L ++PY+ KF+ L + G
Sbjct: 175 NAEKLFEVLSLSKTKLPLRNLVLVNSSSVSEKLVNNPYNLKFM------LWSDFLQKGMD 228
Query: 210 CVVDPS-AEEESCSVISLIVGITGNSK 235
+DP+ + +S ++IS G TG+ K
Sbjct: 229 TELDPTPGDPDSLNIISYTSGTTGSPK 255
>UniRef50_A5DQA4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1191
Score = 34.7 bits (76), Expect = 2.6
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 21 DFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIE 80
D +++ S +DY E+E+DV ++ + + NTD + E++T +K D GKI
Sbjct: 709 DTQNEAESKVDY---EVESDVDNNVKSNVENEVENTDEVENEIDELETEAGEKSDPGKI- 764
Query: 81 FFVDCSANATPEFEGRGGENL 101
+ SA+ T + G E L
Sbjct: 765 -VPESSASVTVQGIVAGDEGL 784
>UniRef50_UPI00004991B7 Cluster: predicted protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: predicted protein - Entamoeba
histolytica HM-1:IMSS
Length = 232
Score = 33.9 bits (74), Expect = 4.5
Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 37 LETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGR 96
++ +V+ + SA R+ NT I+ GI TEI D GK +++ + E +
Sbjct: 15 IKKNVIHNLKSSASYRIGNTQIICGISTEIVQMIQD----GKEPQYIEVEIKRSGLNEDK 70
Query: 97 GGENLASSISNTMQRAYHSSQAFDLKQLCIV--EGKQC---WKLYVDILILECGGNLFDA 151
+ SI ++ + F+ ++ +V E K+ K+++ I++ G++FD
Sbjct: 71 --SPMIESIPMWIEEVLNDKDLFENREKLLVSTEDKETSFYQKIHLVNYIIDDDGSVFDV 128
Query: 152 VSLATKAALFNTRIPLVKALLMDG 175
LA+ AL + +K + +DG
Sbjct: 129 AILASIKALLTLELQEMK-IGLDG 151
>UniRef50_Q08VK2 Cluster: Ribonuclease PH; n=2;
Proteobacteria|Rep: Ribonuclease PH - Stigmatella
aurantiaca DW4/3-1
Length = 276
Score = 33.9 bits (74), Expect = 4.5
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 8 STEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEID 67
S + F + + RS R +D RP+ L V HA GSA++ +T ++V E
Sbjct: 26 SAREAFSLSPEELPVRSFQRGVLDLRPVTLTPGVSRHAEGSAQVEFGHTRVIVTCSVEER 85
Query: 68 TP 69
P
Sbjct: 86 VP 87
>UniRef50_Q1HQF7 Cluster: Exosomal 3'-5' exoribonuclease complex
subunit Rrp41-like protein; n=3; Culicidae|Rep:
Exosomal 3'-5' exoribonuclease complex subunit
Rrp41-like protein - Aedes aegypti (Yellowfever
mosquito)
Length = 307
Score = 33.9 bits (74), Expect = 4.5
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDK 73
R GR + + R ++ VVS A GS L L NT ++V + + PK +K
Sbjct: 42 RKCGRKDNESRKYFMKLGVVSTAKGSTYLELGNTKVIVSVFDPREIPKQNK 92
>UniRef50_Q9UXC2 Cluster: Probable exosome complex exonuclease 1;
n=16; Archaea|Rep: Probable exosome complex exonuclease
1 - Sulfolobus solfataricus
Length = 248
Score = 33.5 bits (73), Expect = 6.0
Identities = 31/147 (21%), Positives = 60/147 (40%), Gaps = 10/147 (6%)
Query: 23 RSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGI--KTEIDTPKPDKPDMGKIE 80
R+DGR + R +++E V+ +A GSA + NT + + E+ PD +
Sbjct: 19 RTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKEMHPRHLSLPDRAVLR 78
Query: 81 FFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCIVEGKQCWKLYVDIL 140
+ +T E + +S ++ A S+ +L ++ ++ +IL
Sbjct: 79 VRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRTAID------VFTEIL 132
Query: 141 ILECGGNLFDAVSLATKAALFNTRIPL 167
+ G L +A AL + IP+
Sbjct: 133 QADAGSRLVSL--MAASLALADAGIPM 157
>UniRef50_Q7VIL0 Cluster: Polyribonucleotide nucleotidyltransferase;
n=4; root|Rep: Polyribonucleotide nucleotidyltransferase
- Helicobacter hepaticus
Length = 709
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
+Q R+DGR D RP+ ++T+++ A GS T LV
Sbjct: 316 LQSHIRADGRGLKDVRPISIQTNILPFAHGSVLFTRGQTQALV 358
>UniRef50_A7I002 Cluster: Polyribonucleotide nucleotidyltransferase;
n=1; Campylobacter hominis ATCC BAA-381|Rep:
Polyribonucleotide nucleotidyltransferase -
Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 /
NCTC 13146 /CH001A)
Length = 711
Score = 33.1 bits (72), Expect = 7.9
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 18 VQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
+ E R+DGR+ + RP+ +ET+++ +A GS T LV
Sbjct: 318 INERRRADGRALDEIRPISIETNILPNAHGSCLFTRGQTQALV 360
>UniRef50_Q5C2I8 Cluster: SJCHGC06449 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06449 protein - Schistosoma
japonicum (Blood fluke)
Length = 170
Score = 33.1 bits (72), Expect = 7.9
Identities = 33/156 (21%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 19 QEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEIDTPKPDKPDMGK 78
+ + R + R +++ +++ DV++ GSA +++ T ++ G+K ++ P+ + G
Sbjct: 18 ERNIRLEERDCLEFAEIDVTADVLTSCHGSALVKVGRTQVIAGVKVKV---IPENGNSGS 74
Query: 79 IEFFVDCSANATPEFEGRGGE-NLASSISNTMQR-----AYHSSQA----FDLKQLCIVE 128
I V+ + + A +S+T+QR A+ S ++ F L +
Sbjct: 75 IICNVEFAGLCHRGSRLNASQPKYAQWLSSTIQRLLNNFAFPSVESQLNIFSLNDSDMST 134
Query: 129 GKQCWKLYVDILILECGGNLFDAVSLATKAALFNTR 164
+ L +D+ +L G L DA A +L T+
Sbjct: 135 PVASYCLKLDLFVLHDDGCLLDACVPAALVSLCTTK 170
>UniRef50_Q9Y223 Cluster: Bifunctional UDP-N-acetylglucosamine
2-epimerase/N-acetylmannosamine kinase
(UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N-
acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine
diphosphate-N- acetylglucosamine-2-epimerase)
(UDP-GlcNAc-2-epimerase); N- acetylmannosamine kinase
(EC 2.7.1.60) (ManAc kinase)]; n=39; Deuterostomia|Rep:
Bifunctional UDP-N-acetylglucosamine
2-epimerase/N-acetylmannosamine kinase
(UDP-GlcNAc-2-epimerase/ManAc kinase) [Includes: UDP-N-
acetylglucosamine 2-epimerase (EC 5.1.3.14) (Uridine
diphosphate-N- acetylglucosamine-2-epimerase)
(UDP-GlcNAc-2-epimerase); N- acetylmannosamine kinase
(EC 2.7.1.60) (ManAc kinase)] - Homo sapiens (Human)
Length = 722
Score = 33.1 bits (72), Expect = 7.9
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 7/51 (13%)
Query: 134 KLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQLSD 184
+L DI+I+ G+ FDA++LAT AAL N RI L ++GG V + D
Sbjct: 101 RLKPDIMIVH--GDRFDALALATSAALMNIRI-----LHIEGGEVSGTIDD 144
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.317 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 313,840,821
Number of Sequences: 1657284
Number of extensions: 12913258
Number of successful extensions: 25518
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 25305
Number of HSP's gapped (non-prelim): 160
length of query: 277
length of database: 575,637,011
effective HSP length: 100
effective length of query: 177
effective length of database: 409,908,611
effective search space: 72553824147
effective search space used: 72553824147
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 72 (33.1 bits)
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