Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002671-TA|BGIBMGA002671-PA|IPR001247|Exoribonuclease
(277 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024331-1|ABC86393.1| 296|Drosophila melanogaster IP10364p pro... 323 2e-88
AE013599-2161|AAF58076.3| 296|Drosophila melanogaster CG8395-PA... 323 2e-88
AY089277-1|AAL90015.1| 412|Drosophila melanogaster AT07738p pro... 80 3e-15
AE014298-2479|AAF48665.2| 412|Drosophila melanogaster CG9606-PA... 80 3e-15
AE014297-3007|AAF55894.2| 200|Drosophila melanogaster CG15503-P... 31 1.7
>BT024331-1|ABC86393.1| 296|Drosophila melanogaster IP10364p
protein.
Length = 296
Score = 323 bits (793), Expect = 2e-88
Identities = 147/231 (63%), Positives = 185/231 (80%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
MA + LS EK +I+HGV++DFR DGRS DYRPM+LET +VS+ASGSARLRLANTDILV
Sbjct: 1 MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILV 60
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
G+KTEID P P P+ GK+EFFVDCSANATPEFEGRGG +LA + ++Q AY S AF+
Sbjct: 61 GVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFN 120
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
+ LC++ G+QCWKLY+DILILECGGNL DAVSLA KAALFNT++P V A ++D G DL
Sbjct: 121 YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDL 180
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGIT 231
+SD+PYD + + + PLLVT+CKIG+ +VDPSAEEE CS +S++V ++
Sbjct: 181 IISDNPYDCTRIGIETVPLLVTVCKIGDYVLVDPSAEEEVCSTVSMVVSVS 231
>AE013599-2161|AAF58076.3| 296|Drosophila melanogaster CG8395-PA
protein.
Length = 296
Score = 323 bits (793), Expect = 2e-88
Identities = 147/231 (63%), Positives = 185/231 (80%)
Query: 1 MAGLLLSSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILV 60
MA + LS EK +I+HGV++DFR DGRS DYRPM+LET +VS+ASGSARLRLANTDILV
Sbjct: 1 MAYVALSEAEKTYILHGVEDDFRCDGRSRRDYRPMDLETGLVSNASGSARLRLANTDILV 60
Query: 61 GIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFD 120
G+KTEID P P P+ GK+EFFVDCSANATPEFEGRGG +LA + ++Q AY S AF+
Sbjct: 61 GVKTEIDVPNPLTPEFGKLEFFVDCSANATPEFEGRGGSDLAQELILSLQNAYESPLAFN 120
Query: 121 LKQLCIVEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDL 180
+ LC++ G+QCWKLY+DILILECGGNL DAVSLA KAALFNT++P V A ++D G DL
Sbjct: 121 YRTLCLIPGQQCWKLYIDILILECGGNLHDAVSLAAKAALFNTKLPRVTATMLDAGITDL 180
Query: 181 QLSDDPYDFKFLDVGSAPLLVTLCKIGEKCVVDPSAEEESCSVISLIVGIT 231
+SD+PYD + + + PLLVT+CKIG+ +VDPSAEEE CS +S++V ++
Sbjct: 181 IISDNPYDCTRIGIETVPLLVTVCKIGDYVLVDPSAEEEVCSTVSMVVSVS 231
>AY089277-1|AAL90015.1| 412|Drosophila melanogaster AT07738p
protein.
Length = 412
Score = 80.2 bits (189), Expect = 3e-15
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
S E+ F+ V+++ R DGR + + R +EL GS + + +T +L + E+
Sbjct: 13 SKPERSFVQLAVKQNQRLDGRRSNESRDVEL---TFGKDWGSVAVSMGDTKVLAQVTCEM 69
Query: 67 DTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCI 126
P +P+ GKI V A + + + +++ ++R + SS++ DL+ LC+
Sbjct: 70 GPPALSRPNEGKIHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCV 129
Query: 127 VEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQL-SDD 185
K W + V++ +L GNL+DA ++AT AAL + R P V DG +L++
Sbjct: 130 AVEKHVWCIRVNVNVLNHDGNLYDASTIATLAALMHFRRPDV--WYKDG---ELRIFKKK 184
Query: 186 PYDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCS 222
+F L P+ VT C K + ++DP+ EE+ +
Sbjct: 185 EREFIPLLFHHYPVSVTYCVYKSSVQPILDPTLLEENAA 223
>AE014298-2479|AAF48665.2| 412|Drosophila melanogaster CG9606-PA
protein.
Length = 412
Score = 80.2 bits (189), Expect = 3e-15
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 7 SSTEKVFIVHGVQEDFRSDGRSNIDYRPMELETDVVSHASGSARLRLANTDILVGIKTEI 66
S E+ F+ V+++ R DGR + + R +EL GS + + +T +L + E+
Sbjct: 13 SKPERSFVQLAVKQNQRLDGRRSNESRDVEL---TFGKDWGSVAVSMGDTKVLAQVTCEM 69
Query: 67 DTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSISNTMQRAYHSSQAFDLKQLCI 126
P +P+ GKI V A + + + +++ ++R + SS++ DL+ LC+
Sbjct: 70 GPPALSRPNEGKIHLNVYLGGVAFLDEAHTTHDQRSLKLNSLLERTFRSSRSIDLESLCV 129
Query: 127 VEGKQCWKLYVDILILECGGNLFDAVSLATKAALFNTRIPLVKALLMDGGNVDLQL-SDD 185
K W + V++ +L GNL+DA ++AT AAL + R P V DG +L++
Sbjct: 130 AVEKHVWCIRVNVNVLNHDGNLYDASTIATLAALMHFRRPDV--WYKDG---ELRIFKKK 184
Query: 186 PYDFKFLDVGSAPLLVTLC--KIGEKCVVDPSAEEESCS 222
+F L P+ VT C K + ++DP+ EE+ +
Sbjct: 185 EREFIPLLFHHYPVSVTYCVYKSSVQPILDPTLLEENAA 223
>AE014297-3007|AAF55894.2| 200|Drosophila melanogaster CG15503-PA
protein.
Length = 200
Score = 31.1 bits (67), Expect = 1.7
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 60 VGIKTEIDTPKPDKPDMGKIEFFVDCSANATPEFEGRGGENLASSIS 106
V IK ++ + DKP+MG ++ FVD S N + + G GG N++ +I+
Sbjct: 29 VPIKDDLLSKCEDKPEMGYLDAFVDLS-NFSRK-RGPGGVNISGNIT 73
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.317 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,141,595
Number of Sequences: 52641
Number of extensions: 597298
Number of successful extensions: 1145
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1141
Number of HSP's gapped (non-prelim): 5
length of query: 277
length of database: 24,830,863
effective HSP length: 84
effective length of query: 193
effective length of database: 20,409,019
effective search space: 3938940667
effective search space used: 3938940667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 61 (28.7 bits)
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