GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002670-TA|BGIBMGA002670-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
         (332 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    26   0.44 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    26   0.44 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    26   0.44 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           25   0.77 

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 12/23 (52%), Positives = 12/23 (52%)

Query: 74  TRRNQNNHQVITNGNVNSIRNSN 96
           TR N NN    TN N N   NSN
Sbjct: 124 TRGNNNNTPSATNNNTNFNNNSN 146


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
          ortholog protein.
          Length = 471

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 12/23 (52%), Positives = 12/23 (52%)

Query: 74 TRRNQNNHQVITNGNVNSIRNSN 96
          TR N NN    TN N N   NSN
Sbjct: 72 TRGNNNNTPSATNNNTNFNNNSN 94


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.8 bits (54), Expect = 0.44
 Identities = 12/23 (52%), Positives = 12/23 (52%)

Query: 74  TRRNQNNHQVITNGNVNSIRNSN 96
           TR N NN    TN N N   NSN
Sbjct: 255 TRGNNNNTPSATNNNTNFNNNSN 277


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 62  SRNGAN-NQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 100
           + NG N N +W     N N +   +     + RNS  +GN
Sbjct: 378 NNNGNNSNNHWRKNNPNDNRNNTSSRAQGETSRNSKNSGN 417


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.319    0.139    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,206
Number of Sequences: 317
Number of extensions: 3886
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 4
length of query: 332
length of database: 114,650
effective HSP length: 57
effective length of query: 275
effective length of database: 96,581
effective search space: 26559775
effective search space used: 26559775
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)