BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002670-TA|BGIBMGA002670-PA|IPR000734|Lipase,
IPR013818|Lipase, N-terminal
(332 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 33 0.28
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 32 0.65
Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical pr... 31 1.5
X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein. 31 1.5
X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein. 31 1.5
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 31 1.5
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 31 1.5
X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein. 30 2.6
AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical ... 30 2.6
L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 4.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical ... 29 4.6
AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical ... 29 4.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 4.6
Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical pr... 29 6.1
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 6.1
U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical pr... 28 8.0
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 33.1 bits (72), Expect = 0.28
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Query: 64 NGANNQYWLFTRRNQNNHQVITNGNVNSIRNSNYNGN 100
NG NN Y N N Q N N N+ N+NYN N
Sbjct: 60 NGYNNNY----NNNNNQQQQFYNNNNNNYNNNNYNNN 92
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 260 QPGCRVSTCSHSRAYELYASTVRHNR 285
Q G VSTCSHS YE Y S NR
Sbjct: 1199 QYGVDVSTCSHSMHYECYRSLAEANR 1224
>Z81449-9|CAB03760.3| 700|Caenorhabditis elegans Hypothetical
protein C46F11.1b protein.
Length = 700
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 99 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 153
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>Z81449-8|CAI70399.1| 705|Caenorhabditis elegans Hypothetical
protein C46F11.1a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 99 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 153
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>X64415-2|CAA45761.1| 700|Caenorhabditis elegans unc-93 protein.
Length = 700
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 99 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 153
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 557 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 609
>X64415-1|CAA45760.1| 705|Caenorhabditis elegans unc-93 protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 99 GNLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNG 153
G +PLFV G N V M+ P A + +V G+A+G++NT +NG
Sbjct: 562 GRMPLFVF--GAVVNLLMIVTLMVWPLNAADTQIFYVVAAMWGMADGVWNTQING 614
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.5
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 6/140 (4%)
Query: 183 GFSLGAHVVG--NAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLL 240
GF G G N G GG N TG G GG+ G+ T G
Sbjct: 17 GFGSGGGFGGGNNGGSGFGGGKNGGTGF--GGGNTGGSGFGGGNTGGSGFGGGKTGGSGF 74
Query: 241 GIFDRIAHGDFYPNGGRNPQPGCRVSTCSHSRAYELYASTVRHNRFVGRXXXXXXXXXXX 300
G + G + G +P G S S A + S + + F G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGAS-SGFGGSTATSGFGSGEKSSAF-GGSGGFGGSATGF 132
Query: 301 XXSGGTFNMGNAVFGKRGNG 320
GG+F GN+ FG+ G+G
Sbjct: 133 GSGGGSFGGGNSGFGEGGHG 152
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 30.7 bits (66), Expect = 1.5
Identities = 37/140 (26%), Positives = 49/140 (35%), Gaps = 6/140 (4%)
Query: 183 GFSLGAHVVG--NAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLL 240
GF G G N G GG N TG G GG+ G+ T G
Sbjct: 17 GFGSGGGFGGGNNGGSGFGGGKNGGTGF--GGGNTGGSGFGGGNTGGSGFGGGKTGGSGF 74
Query: 241 GIFDRIAHGDFYPNGGRNPQPGCRVSTCSHSRAYELYASTVRHNRFVGRXXXXXXXXXXX 300
G + G + G +P G S S A + S + + F G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGAS-SGFGGSTATSGFGSGEKSSAF-GGSGGFGGSATGF 132
Query: 301 XXSGGTFNMGNAVFGKRGNG 320
GG+F GN+ FG+ G+G
Sbjct: 133 GSGGGSFGGGNSGFGEGGHG 152
>X66104-1|CAA46899.1| 557|Caenorhabditis elegans esterase protein.
Length = 557
Score = 29.9 bits (64), Expect = 2.6
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 88 NVNSIRN--SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLA 143
NV + RN S + P+ V +HG + +S L + D V+ +++R
Sbjct: 102 NVFTPRNASSEFKNGRPVMVYIHGGGYELCASSDFCAYSLSGTLPLKDVVVVSINYRLGV 161
Query: 144 NGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPN 203
G T N P GNF +W W + H+ F + V G+ AGG
Sbjct: 162 FGFLTTGDNVCP------GNFGLW-DQTLALKWVQKHISSFGGDPNCVTVFGQSAGGAST 214
Query: 204 RVTGLDP 210
+ L P
Sbjct: 215 DLLSLSP 221
>AF016437-2|AAB65887.1| 554|Caenorhabditis elegans Hypothetical
protein F13H6.3 protein.
Length = 554
Score = 29.9 bits (64), Expect = 2.6
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 88 NVNSIRN--SNYNGNLPLFVIVHG--WNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLA 143
NV + RN S + P+ V +HG + +S L + D V+ +++R
Sbjct: 102 NVFTPRNASSEFKNGRPVMVYIHGGGYELCASSDFCAYSLSGTLPLKDVVVVSINYRLGV 161
Query: 144 NGLYNTAVNGVPSVGQFLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPN 203
G T N P GNF +W W + H+ F + V G+ AGG
Sbjct: 162 FGFLTTGDNVCP------GNFGLW-DQTLALKWVQKHISSFGGDPNCVTVFGQSAGGAST 214
Query: 204 RVTGLDP 210
+ L P
Sbjct: 215 DLLSLSP 221
>L14730-1|AAB37563.2| 351|Caenorhabditis elegans Hypothetical
protein C13G5.2 protein.
Length = 351
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 208 LDPAGPRWGGNNQALNRNAGAYV-EAIHTDGGLLGIFDR 245
L+P+G + G AL+RNA YV + +L IFD+
Sbjct: 100 LEPSGHGFRGGIAALSRNASHYVISTVGRSSNILNIFDK 138
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 62 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 116
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/59 (35%), Positives = 24/59 (40%), Gaps = 7/59 (11%)
Query: 62 SRNGANNQYWLFTRRNQNNHQVITNGNVNSIRNSN----YNGNLPLFVIVHGWNSNGNS 116
SRN N W +N NN+ N +N N N YNGN WNS NS
Sbjct: 151 SRNDGENDDWNNGDQNNNNNFNSKNNRMNKYGNRNDGDDYNGN---GNNQDNWNSGSNS 206
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 29.1 bits (62), Expect = 4.6
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 8/61 (13%)
Query: 167 WLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNA 226
W N GGGNWG G G + G G GG R G G R GG R
Sbjct: 72 WGNNGGGGNWG-----GNGGGGNGGGGRGGGGGGGGGRGGG---GGGRGGGGGGGGGRGG 123
Query: 227 G 227
G
Sbjct: 124 G 124
>AL132952-7|CAB61139.2| 670|Caenorhabditis elegans Hypothetical
protein Y51H4A.7 protein.
Length = 670
Score = 29.1 bits (62), Expect = 4.6
Identities = 21/62 (33%), Positives = 25/62 (40%)
Query: 160 FLGNFLVWLINNGGGNWGRVHLIGFSLGAHVVGNAGRQAGGRPNRVTGLDPAGPRWGGNN 219
F G V L N GG WG V GF + +A R+A G N W GN
Sbjct: 577 FRGATWVALHNGGGVGWGDVINGGFGIVLDGSSDAARRAEGMLNWDVPNGVTRRSWSGNA 636
Query: 220 QA 221
+A
Sbjct: 637 KA 638
>AL033514-4|CAA22094.2| 827|Caenorhabditis elegans Hypothetical
protein Y75B8A.3 protein.
Length = 827
Score = 29.1 bits (62), Expect = 4.6
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 88 NVNSIRNSNYNGNLPLFVIVHGWNSNGNSAVNTMIRPAL---LAVSDCNVIVVDWRGLAN 144
NV + + N N NL + V++ G N N + + L V+ + +R A
Sbjct: 121 NVYTPQAGNTNANLSVLVLIDGSNGFSNGGCDQNQEKGIISNLVQRQIVVVTMQYRIGAL 180
Query: 145 GLYNTAVNGVPSVGQFLGNF--LVWL---INNGGGNWGRVHLIGFSLGAHVV 191
G + T N V S L + W+ I N GGN ++ + G GA V
Sbjct: 181 GFFTTYTNSVQSNLGMLDQVQAMRWIKTEIVNFGGNPNQITVAGQDDGACAV 232
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 29.1 bits (62), Expect = 4.6
Identities = 29/77 (37%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 170 NNGGGNWGR-VHLIGFSLGAH--VVGNAGRQAGGRPN---RVTGLDPAGPR--WGGNNQA 221
NNGGG WGR G G + GN G GGR + G G R WGGNN
Sbjct: 51 NNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNN-- 108
Query: 222 LNRNAGAYVEAIHTDGG 238
N G + + DGG
Sbjct: 109 -NGGGGNWGGGGNNDGG 124
>Z71185-6|CAI46563.1| 286|Caenorhabditis elegans Hypothetical
protein C35A5.10 protein.
Length = 286
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 86 NGNVNSIRNSNYNGNL-PLFVIVHGWNSNGNSAVNTMI 122
N N N N+NYNGN P G+N+ G VN +
Sbjct: 121 NNNYNPYINNNYNGNYNPYGTSNGGYNAYGTIPVNVNV 158
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 6.1
Identities = 36/140 (25%), Positives = 48/140 (34%), Gaps = 6/140 (4%)
Query: 183 GFSLGAHVVG--NAGRQAGGRPNRVTGLDPAGPRWGGNNQALNRNAGAYVEAIHTDGGLL 240
GF G G N G GG N TG G GG+ G+ G
Sbjct: 17 GFGSGGGFGGGNNGGSGFGGGKNGGTGF--GGGNTGGSGFGGGNTGGSGFGGGKAGGSGF 74
Query: 241 GIFDRIAHGDFYPNGGRNPQPGCRVSTCSHSRAYELYASTVRHNRFVGRXXXXXXXXXXX 300
G + G + G +P G S S A + S + + F G
Sbjct: 75 GGGNTCGSGFGGGSTGGSPYGGAS-SGFGGSTATSGFGSGEKSSAF-GGSGGFGGSATGF 132
Query: 301 XXSGGTFNMGNAVFGKRGNG 320
GG+F GN+ FG+ G+G
Sbjct: 133 GSGGGSFGGGNSGFGEGGHG 152
>U23529-4|AAK39164.2| 545|Caenorhabditis elegans Hypothetical
protein C15B12.4 protein.
Length = 545
Score = 28.3 bits (60), Expect = 8.0
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 112 SNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVPSV 157
S+GNS+VN M + + S V+ +D G Y A NG+ V
Sbjct: 289 SDGNSSVNLMSNTNIESDSGLGVVHIDGAGQGTDNYVVASNGLKFV 334
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.139 0.448
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,618,255
Number of Sequences: 27539
Number of extensions: 398392
Number of successful extensions: 768
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 747
Number of HSP's gapped (non-prelim): 35
length of query: 332
length of database: 12,573,161
effective HSP length: 82
effective length of query: 250
effective length of database: 10,314,963
effective search space: 2578740750
effective search space used: 2578740750
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -