GeneModel BLAST Result against uniref50

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002667-TA|BGIBMGA002667-PA|undefined
         (145 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2S254 Cluster: DNA mismatch repair protein MutS; n=1; ...    31   7.3  
UniRef50_A0GNR3 Cluster: Cell divisionFtsK/SpoIIIE; n=1; Burkhol...    31   7.3  
UniRef50_UPI00015546BF Cluster: PREDICTED: similar to tRNA-nucle...    31   9.7  
UniRef50_A7S2M0 Cluster: Predicted protein; n=1; Nematostella ve...    31   9.7  

>UniRef50_Q2S254 Cluster: DNA mismatch repair protein MutS; n=1;
           Salinibacter ruber DSM 13855|Rep: DNA mismatch repair
           protein MutS - Salinibacter ruber (strain DSM 13855)
          Length = 908

 Score = 31.5 bits (68), Expect = 7.3
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 5   PECQLRRRRSSATSNIQLNLDVGYQVSEGQPAEDTPS---PSTAKVLAKRSSSAAFMEFK 61
           P+  + R R    +    +L+VG   ++G P+ED PS   PS   V AK+  + A  + +
Sbjct: 799 PDAVIARAREVLQNLESQHLEVGADEADGAPSEDPPSEDPPSGDGVRAKKGEADAVPDLE 858

Query: 62  NKQ 64
           + Q
Sbjct: 859 DSQ 861


>UniRef50_A0GNR3 Cluster: Cell divisionFtsK/SpoIIIE; n=1;
           Burkholderia phytofirmans PsJN|Rep: Cell
           divisionFtsK/SpoIIIE - Burkholderia phytofirmans PsJN
          Length = 1488

 Score = 31.5 bits (68), Expect = 7.3
 Identities = 28/103 (27%), Positives = 37/103 (35%), Gaps = 5/103 (4%)

Query: 39  TPSPSTAKVLAKRSSSAAFMEFKNKQQSFXXXXXXXXXXXXXXXXXXXXXNTVSG-INRS 97
           TP+P+ A V A  S+SA F+E     +                       +  S  +   
Sbjct: 587 TPTPTHASVSASASASAPFVEQAPIAEPAPAPAPALASSSSSSSSSSPSSSPASPYVPPV 646

Query: 98  LTPVPIQDFAANVVYTEG----PQATDFLRVKTTEGDCYTDVS 136
            TP P Q FAA +  +E     P   D   V TT  D Y   S
Sbjct: 647 ATPTPFQIFAAQLQASEAHEDEPPFEDNPTVSTTHADHYASPS 689


>UniRef50_UPI00015546BF Cluster: PREDICTED: similar to
           tRNA-nucleotidyltransferase; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to
           tRNA-nucleotidyltransferase - Ornithorhynchus anatinus
          Length = 433

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 7   CQLRRRRSSATSNIQLNLDVGYQVS-EGQPAEDTPSPSTAKVLAKRSSSAAFMEFKNKQQ 65
           C   +RR +        +  G+QV+ E  P E+  SP + ++LAKRS        K+ QQ
Sbjct: 77  CPEDKRRIANLIKELARISEGHQVTQEEMPKENRKSPKSIRMLAKRSKLVVARRKKSSQQ 136


>UniRef50_A7S2M0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 675

 Score = 31.1 bits (67), Expect = 9.7
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 3   EEPECQLRRRRSSATSNIQLNLDVGYQVSEGQPAEDTPSPSTAKV--LAKRSSSA 55
           E   C  R RR    S+I L++D G+ +  GQP E +  PS  +     KR  SA
Sbjct: 602 ENSICYSRMRRGCKLSDI-LDMDNGHVIEGGQPREGSRDPSVPRFCDAIKRDDSA 655


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.307    0.123    0.334 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,373,379
Number of Sequences: 1657284
Number of extensions: 3851598
Number of successful extensions: 8525
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 8524
Number of HSP's gapped (non-prelim): 5
length of query: 145
length of database: 575,637,011
effective HSP length: 93
effective length of query: 52
effective length of database: 421,509,599
effective search space: 21918499148
effective search space used: 21918499148
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 67 (31.1 bits)