Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002666-TA|BGIBMGA002666-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
(127 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0173 - 14910492-14912081 28 2.6
05_05_0044 - 21819193-21819418,21819531-21820759 28 2.6
02_04_0258 + 21339682-21339806,21340635-21340730,21340905-213409... 28 2.6
01_04_0084 - 15845125-15845405,15845752-15845809 27 3.5
07_03_1555 - 27669981-27670148,27670232-27670315,27670349-276703... 27 4.6
01_06_0230 + 27718840-27720188,27720983-27721174,27721488-277215... 27 4.6
07_03_0694 + 20749814-20750047,20750387-20750578,20750690-207508... 27 6.1
>12_02_0173 - 14910492-14912081
Length = 529
Score = 27.9 bits (59), Expect = 2.6
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 29 VRESGVSTEAINAAKIGKYSKDKAFKNFVLCFFKKSAIFNSDG 71
V + V+ E + A G Y K KAF + VL IFN+DG
Sbjct: 94 VTANPVNVEHVLRANFGNYPKGKAFTD-VLGDLLGGGIFNADG 135
>05_05_0044 - 21819193-21819418,21819531-21820759
Length = 484
Score = 27.9 bits (59), Expect = 2.6
Identities = 10/39 (25%), Positives = 23/39 (58%)
Query: 2 IIILSYSQNVHLAETQKEKAKQYTSECVRESGVSTEAIN 40
+I+ +++Q ++L + ++A+QY VR EA++
Sbjct: 392 LILANFAQFLYLVQNDHDRAEQYFERAVRAEPADAEALS 430
>02_04_0258 +
21339682-21339806,21340635-21340730,21340905-21340980,
21341085-21341143,21341280-21341380,21341447-21341773,
21341861-21342021,21342100-21342303,21342735-21342966,
21343629-21344239
Length = 663
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 5 LSY-SQNVHLAETQKEKAKQYTSECVRESGVSTEAINAAKIGKYS 48
+SY S N H +Q KA Q ++ E+ ST A N + G+Y+
Sbjct: 433 VSYGSSNTHKQLSQPAKAGQTSTGTTSEADGSTSAYNGNQAGRYA 477
>01_04_0084 - 15845125-15845405,15845752-15845809
Length = 112
Score = 27.5 bits (58), Expect = 3.5
Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 48 SKDKAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAA 107
S D A KN +L FKK + +S + + D + GV+ E + L+ N
Sbjct: 16 SADAAMKNRILGLFKKGS--SSRSSHHQDESSTHSSTGVSMEEVDATLRLLDNSNLDHIG 73
Query: 108 DKAFEIFRCYYKGTKTH 124
D+ ++ T H
Sbjct: 74 DREMQVCHMIKDRTFAH 90
>07_03_1555 -
27669981-27670148,27670232-27670315,27670349-27670360,
27670683-27670761,27670840-27671078,27671167-27671260,
27671342-27671484,27671688-27671786,27671870-27671998,
27672123-27672197,27672308-27672520,27672581-27672676,
27673282-27673380,27673600-27673839,27674212-27674322,
27674429-27674626,27674720-27674835,27675076-27675193,
27675761-27675866,27675972-27676030,27676259-27676388,
27676730-27676887,27677672-27677887,27677972-27678082,
27678313-27678472,27679364-27679509,27679603-27679695,
27680610-27680706,27681224-27681294,27681407-27681505,
27682037-27682168,27682287-27682729,27683252-27683564,
27684301-27684549
Length = 1631
Score = 27.1 bits (57), Expect = 4.6
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 2 IIILSYSQNVHLAETQKEKAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLCFF 61
++ L +N + E + AK +T E + G T N + +G+Y+K+ N F
Sbjct: 172 MVFLPQDEN-SMEEAKAVVAKVFTDEGLEVLGWRTVPFNVSVVGRYAKE-TMPNIQQIFV 229
Query: 62 KKSAIFNSD 70
K + N+D
Sbjct: 230 KVAKEDNAD 238
>01_06_0230 +
27718840-27720188,27720983-27721174,27721488-27721569,
27721651-27721839,27721964-27722077,27722470-27722560,
27722632-27722789,27723401-27723826,27724355-27724727,
27725075-27725238
Length = 1045
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 55 NFVLCFFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIF 114
N V FF K + GTLN V + L EA +K +++ G+A +++
Sbjct: 651 NLVYEFFNKVEKTSIPGTLNYKVLINALWREGKIDEAVMAVKGMESRGIVGSASLYYDLA 710
Query: 115 RCYYKG 120
RC G
Sbjct: 711 RCLCSG 716
>07_03_0694 +
20749814-20750047,20750387-20750578,20750690-20750870,
20751254-20751666
Length = 339
Score = 26.6 bits (56), Expect = 6.1
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 60 FFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFE 112
F K F S G D+A+ + S S K+ N TG+G AD +
Sbjct: 181 FAKLKEQFGSKGLNVQDLAILSGAHAIGNSHCVSFAKRLYNFTGKGDADPTLD 233
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.130 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,131,979
Number of Sequences: 37544
Number of extensions: 100415
Number of successful extensions: 237
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 233
Number of HSP's gapped (non-prelim): 7
length of query: 127
length of database: 14,793,348
effective HSP length: 74
effective length of query: 53
effective length of database: 12,015,092
effective search space: 636799876
effective search space used: 636799876
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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