GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002666-TA|BGIBMGA002666-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
         (127 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106582-4|AAC78219.1|  456|Caenorhabditis elegans Hypothetical ...    32   0.14 
AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical...    27   3.1  
U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical pr...    27   5.4  
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ...    27   5.4  
Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase...    26   7.2  
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase...    26   7.2  
AF068714-7|AAT68905.1|  592|Caenorhabditis elegans Egg laying de...    26   7.2  
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de...    26   7.2  
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de...    26   7.2  
Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>AF106582-4|AAC78219.1|  456|Caenorhabditis elegans Hypothetical
           protein W05F2.6 protein.
          Length = 456

 Score = 31.9 bits (69), Expect = 0.14
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 70  DGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKA 110
           DG +   V + KL PG NK + +S   Q K KT   AA KA
Sbjct: 13  DGRVTRSVTVRKLGPGANKEKQESDNSQ-KKKTVNAAAQKA 52


>AF036705-10|AAB95167.2|  612|Caenorhabditis elegans Hypothetical
           protein F37C4.1 protein.
          Length = 612

 Score = 27.5 bits (58), Expect = 3.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 84  PGVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYKGTKTH 124
           P +N    + + K  +N T   A DKA  IF  Y    K H
Sbjct: 508 PRINAKVVRRITKFMRNHTDPVAIDKAIVIFHEYEMARKRH 548


>U41540-5|AAK39229.2|  666|Caenorhabditis elegans Hypothetical
           protein F35H12.4 protein.
          Length = 666

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 7/67 (10%)

Query: 48  SKDKAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAA 107
           SKDK    F     + S  +NS    N+   L+ + P + KS+++SVL   KNK+   + 
Sbjct: 312 SKDKVPYVFFAEVIRSSPNYNS----NIKT-LSSVEPRIKKSQSESVL--LKNKSYHDST 364

Query: 108 DKAFEIF 114
           D +  +F
Sbjct: 365 DPSIAVF 371


>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
            protein Y32H12A.8 protein.
          Length = 3901

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/40 (27%), Positives = 23/40 (57%)

Query: 10   NVHLAETQKEKAKQYTSECVRESGVSTEAINAAKIGKYSK 49
            N+H + +  +   +  S+     G STE++N++K GK ++
Sbjct: 3721 NMHNSGSDSDSGSEVRSDSSSSLGGSTESLNSSKKGKRAR 3760


>Z68318-1|CAA92691.1|  285|Caenorhabditis elegans Hypothetical
           protein T21B10.1 protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 5   LSYSQNVHLAETQKEKAKQYTSECVRESGVSTEAINAAK 43
           L Y+QN       K +  +  S C+R +GV +E ++  K
Sbjct: 86  LKYTQNYVPGVDVKNQVLEAASSCLRSAGVKSENVDQYK 124


>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
           beta protein.
          Length = 1418

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 20  KAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLC 59
           K ++   +C+ + G+  +    A++   S  K F+NF  C
Sbjct: 174 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKC 213


>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
           beta homolog EGL-8 protein.
          Length = 1431

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 20  KAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLC 59
           K ++   +C+ + G+  +    A++   S  K F+NF  C
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKC 215


>AF068714-7|AAT68905.1|  592|Caenorhabditis elegans Egg laying
           defective protein 8,isoform c protein.
          Length = 592

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 20  KAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLC 59
           K ++   +C+ + G+  +    A++   S  K F+NF  C
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKC 215


>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
           defective protein 8,isoform a protein.
          Length = 1419

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 20  KAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLC 59
           K ++   +C+ + G+  +    A++   S  K F+NF  C
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKC 215


>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
           defective protein 8,isoform b protein.
          Length = 1431

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 10/40 (25%), Positives = 20/40 (50%)

Query: 20  KAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLC 59
           K ++   +C+ + G+  +    A++   S  K F+NF  C
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKC 215


>Z73103-9|CAJ43433.1|  719|Caenorhabditis elegans Hypothetical
           protein C08F8.2b protein.
          Length = 719

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 57  VLCFFKKSAIFNS----DGTLNMDVALAKLPPGVNKSEA 91
           ++CF K+S  FNS    +  +   V    LPPG   ++A
Sbjct: 357 IVCFSKRSIFFNSKKLEENGIKPAVIYGDLPPGTKLAQA 395


>Z73103-8|CAA97429.1|  721|Caenorhabditis elegans Hypothetical
           protein C08F8.2a protein.
          Length = 721

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 4/39 (10%)

Query: 57  VLCFFKKSAIFNS----DGTLNMDVALAKLPPGVNKSEA 91
           ++CF K+S  FNS    +  +   V    LPPG   ++A
Sbjct: 359 IVCFSKRSIFFNSKKLEENGIKPAVIYGDLPPGTKLAQA 397


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.317    0.130    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,900,560
Number of Sequences: 27539
Number of extensions: 100108
Number of successful extensions: 343
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 333
Number of HSP's gapped (non-prelim): 13
length of query: 127
length of database: 12,573,161
effective HSP length: 73
effective length of query: 54
effective length of database: 10,562,814
effective search space: 570391956
effective search space used: 570391956
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 54 (25.8 bits)