GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002666-TA|BGIBMGA002666-PA|IPR006625|Insect
pheromone/odorant binding protein PhBP, IPR006170|Pheromone/general
odorant binding protein, PBP/GOBP
         (127 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               50   8e-09
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              47   7e-08
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              44   7e-07
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              42   2e-06
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              41   5e-06
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              40   9e-06
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   0.60 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   0.60 
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   3.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   3.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   5.6  

>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 50.0 bits (114), Expect = 8e-09
 Identities = 25/92 (27%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 27  ECVRESGVSTEAINAAKIGKYSKD-KAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPPG 85
           +C +ES VS  A+   K G   +D +  K ++ CF  K  I + +  +++  AL  LP  
Sbjct: 28  DCRKESKVSWAALKKMKAGDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRS 87

Query: 86  VNKSEAQSVLKQCKNKTGQGAADKAFEIFRCY 117
           +  S  + +  +CK+   +   +KA+++ +CY
Sbjct: 88  MQDS-TKKLFNKCKSIQNEDPCEKAYQLVKCY 118


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 46.8 bits (106), Expect = 7e-08
 Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 18  KEKAKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLCFFKKSAIFNS-DGTLNMD 76
           +E   +Y  +C+ E+  + E + A + G++ +D+  K +  C  +K  + +  +G +  +
Sbjct: 33  REMTSKYRKKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNCVLEKFNVMDKKNGKIRYN 92

Query: 77  VALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYK 119
           + L K+ P   K     ++  C N       +K+F   +C Y+
Sbjct: 93  L-LKKVIPEAFKEIGVEMIDSCSNVDSSDKCEKSFMFMKCMYE 134


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 43.6 bits (98), Expect = 7e-07
 Identities = 23/106 (21%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 13  LAETQKEKAKQYTSECVRESGVSTEAINAAKIGKYSK-DKAFKNFVLCFFKKSAIFNSDG 71
           ++E    K ++  S C  E+G+  +  +  K G + K D+    +V C  KK    N+D 
Sbjct: 18  VSEESINKLRKIESVCAEENGIDLKKADDVKKGIFDKNDEKLACYVDCMLKKVGFVNADT 77

Query: 72  TLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCY 117
           T N +    +    ++  +   ++  CK+ T   +  K+ ++ +C+
Sbjct: 78  TFN-EEKFRERTTKLDSEQVNRLVNNCKDITESNSCKKSSKLLQCF 122


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 41.9 bits (94), Expect = 2e-06
 Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 1/95 (1%)

Query: 26  SECVRESGVSTEAINAAKIGKYS-KDKAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPP 84
           S C+ ++G++ + IN    GK + +D+  + ++ C  KK +  + DG  N  V+      
Sbjct: 31  SICMAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAKI 90

Query: 85  GVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYK 119
            +N++E   ++ +C   +      K  +IF+C  K
Sbjct: 91  FLNENEINQLITECSAISDTNVHLKITKIFQCITK 125


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 40.7 bits (91), Expect = 5e-06
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 1/95 (1%)

Query: 26  SECVRESGVSTEAINAAKIGKYSKD-KAFKNFVLCFFKKSAIFNSDGTLNMDVALAKLPP 84
           S C++E G + + I+    GK + D +    F+ C  KK  + + +   N  ++   +  
Sbjct: 31  SVCMKEIGTAQQIIDDINEGKINMDDENVLLFIECTMKKFNVVDENANFNEKISSDIVRA 90

Query: 85  GVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYK 119
            +N +EA  +L +C   +   A  K  +I  C++K
Sbjct: 91  VLNDNEADQLLAECSPISDPNALIKISKILECFFK 125


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 39.9 bits (89), Expect = 9e-06
 Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 21  AKQYTSECVRESGVSTEAINAAKIGKYSKDKAFKNFVLCFFKKSAIFNSDGTLNMDVALA 80
           A    + C  ++GV+T  I A + G++ + +  K ++ C +++  + +    L+++  L 
Sbjct: 37  AASVVNACQTQTGVATVDIEAVRNGQWPETRQLKCYMYCLWEQFGLVDDKRELSLNGMLT 96

Query: 81  ---KLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIFRCYYK-GTKTHILF 127
              ++P    ++E Q  + +CK        + A+   +CY +   +T+ LF
Sbjct: 97  FFQRIP--AYRAEVQKAISECKGIAKGDNCEYAYRFNKCYAELSPRTYYLF 145


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 18  KEKAKQYTSECVRESGVSTEAINAAKIGKY 47
           KE   +YT+E +   GVS E++   K+  Y
Sbjct: 432 KENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 0.60
 Identities = 11/30 (36%), Positives = 17/30 (56%)

Query: 18 KEKAKQYTSECVRESGVSTEAINAAKIGKY 47
          KE   +YT+E +   GVS E++   K+  Y
Sbjct: 58 KENLPKYTTEELNFPGVSIESVTVDKLITY 87


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/64 (18%), Positives = 27/64 (42%)

Query: 56  FVLCFFKKSAIFNSDGTLNMDVALAKLPPGVNKSEAQSVLKQCKNKTGQGAADKAFEIFR 115
           F  C  KK   ++  G  N  V        ++++E   ++ +C   +      K+ ++ +
Sbjct: 62  FSECLIKKFNAYDDGGNFNEVVVREIAEIYLDENEVNKLITECSAISDADIHLKSSKLIK 121

Query: 116 CYYK 119
           C+ K
Sbjct: 122 CFAK 125


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 46  KYSKDKAFKNFVLCFFKKSAIFNSDGTL 73
           + S D   +NF  C    +A F S GTL
Sbjct: 107 RMSADGGCRNFSTCSSHPTAAFISYGTL 134


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 46  KYSKDKAFKNFVLCFFKKSAIFNSDGTL 73
           + S D   +NF  C    +A F S GTL
Sbjct: 106 RMSADGGCRNFSTCSSHPTAAFISYGTL 133


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 70  DGTLNMDVALAKLPPG 85
           DG   +DVA+  L PG
Sbjct: 657 DGRTEIDVAIKTLKPG 672


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.317    0.130    0.366 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,715
Number of Sequences: 429
Number of extensions: 1212
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 127
length of database: 140,377
effective HSP length: 51
effective length of query: 76
effective length of database: 118,498
effective search space:  9005848
effective search space used:  9005848
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
S2: 39 (19.8 bits)