Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002664-TA|BGIBMGA002664-PA|IPR000618|Insect cuticle
protein
(197 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 33 0.16
SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40) 32 0.36
SB_56697| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.48
SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) 31 0.63
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 31 0.83
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 30 1.5
SB_30070| Best HMM Match : zf-C2H2 (HMM E-Value=4.79945e-42) 30 1.5
SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17) 29 1.9
SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7) 29 2.5
SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_49176| Best HMM Match : Suf (HMM E-Value=0.6) 29 3.4
SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.4
SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 5.9
SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.9
SB_12552| Best HMM Match : Peptidase_S9_N (HMM E-Value=1.3e-09) 28 5.9
SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.8
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 27 7.8
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 3 GPYVAM-EGPYVAMEGPYVAMEGPYVAMGGPYVAMEGPYV 41
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 17 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPYVAMGGPYV 55
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 204 GPYVAM-EGPYVAMGGPYVAMEGPYVAMEGPYVAMGGPYV 242
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVG 76
G Y+ EG Y+ + PY+ ++ PY GPY PY G
Sbjct: 225 GPYVAM-EGPYVAMGGPYVAMEGPYVAMEGPYVAMEGPYGG 264
Score = 32.3 bits (70), Expect = 0.27
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 43 EGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 305 EGPYVAMEGPYVAMEGPYVAMGGPYVAMEGPYV 337
Score = 32.3 bits (70), Expect = 0.27
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 313 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPYVAMGGPYV 351
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 43 EGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
EG Y+ + PY+ ++ PY GPY PYV
Sbjct: 2 EGPYVAMEGPYVAMEGPYVAMEGPYVAMGGPYV 34
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 197 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMEGPYV 235
Score = 31.9 bits (69), Expect = 0.36
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 218 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMEGPYV 256
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 10 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 48
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 31 GPYVAM-EGPYVAMGGPYVAMGGPYVAMGGPYVAMEGPYV 69
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ + PY GPY PYV
Sbjct: 306 GPYVAM-EGPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 344
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ G Y+ + PY+ + PY GPY PYV
Sbjct: 38 GPYVAMG-GPYVAMGGPYVAMGGPYVAMEGPYVAMEGPYV 76
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPY 67
G Y+ EG Y+ + PY+ ++ PY GPY
Sbjct: 264 GPYVAM-EGPYVAMGGPYVAMEGPYVAMGGPY 294
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG Y+ + PY+ ++ P GPY PYV
Sbjct: 278 GPYVAM-EGPYVAMGGPYVAMEGPNVAMEGPYVAMEGPYV 316
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ EG + + PY+ ++ PY GPY PYV
Sbjct: 292 GPYVAM-EGPNVAMEGPYVAMEGPYVAMEGPYVAMGGPYV 330
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 36 GKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDY 71
G Y+ G Y+ + PY+ ++ PY GPY Y
Sbjct: 232 GPYVAMG-GPYVAMEGPYVAMEGPYVAMEGPYGGPY 266
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 44 GKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G Y+ + PY+ + PY GPY PYV
Sbjct: 264 GPYVAMEGPYVAMGGPYVAMEGPYVAMGGPYV 295
>SB_47001| Best HMM Match : Asparaginase_2 (HMM E-Value=2.5e-40)
Length = 423
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 103 KNNGIKIIKQKHNYDEDKYDFD----FETENKIRAEEKAVLK 140
K N K+ K+K + +EDK DFD FETE + + E++ +K
Sbjct: 217 KENNEKLQKEKEDKEEDKKDFDCVNSFETELQSKPEKREEVK 258
>SB_56697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 94 IPFYKDGYYKNNGIKIIKQKHNYDEDKYDFDFETENKIRAEEKAV-LKNANSIDEGIASK 152
I FY DGYYK +G +I+ N +++ K+ V +KN+ ++ EG K
Sbjct: 437 IRFYIDGYYKESGHALIRDLWNNKWHTVCLAWQSSGKMWGYIDGVEVKNSQTLAEGSTVK 496
Query: 153 G 153
G
Sbjct: 497 G 497
>SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05)
Length = 1200
Score = 31.1 bits (67), Expect = 0.63
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 57 DNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNN 105
DN DGG G H+ P V +A +Q I D+P+ K Y NN
Sbjct: 271 DNAVDGGSGLGEHNVPPVVKDA-IQRHREYIRGQKNDLPYTKLEQYLNN 318
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 30.7 bits (66), Expect = 0.83
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 25 GKWHPYHYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDY 71
G+ Y G S +Y+P EG Y +P PY + GGFG Y
Sbjct: 436 GQPDSYRAG-SKEYVPQPEG-YSAVPGPYQSYGRGWQGGFGQVQPSY 480
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 29.9 bits (64), Expect = 1.5
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 101 YYKNNGIKIIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYE-YIG 159
Y N + K K ++ ++ F + K EK +L N S+D S+G+ + G
Sbjct: 671 YDPNANVSASKYKSPFNY-QWVIPFTYKTKAMPSEKKMLINKTSVDLEWDSQGWMKANFG 729
Query: 160 PDGFMYRVDYTADENGFRPKVKRLETPYS 188
GF YRV+Y D++ + V LE ++
Sbjct: 730 QRGF-YRVNY--DDSNWESLVNELEASHT 755
>SB_30070| Best HMM Match : zf-C2H2 (HMM E-Value=4.79945e-42)
Length = 436
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 103 KNNGIKIIKQKHNYDEDKYDFDFE-TENKIRAEEKAV 138
KN +K +K +Y ED YD +F +N+I A AV
Sbjct: 9 KNKSVKSSGEKRSYPEDDYDPNFNYVDNRIFATSSAV 45
>SB_34294| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 26 KWHPYHYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYR 85
K H Y D Y PY + Y PY H PY+ AT Y+
Sbjct: 41 KNHATPYKDHATPYKDHATPYKDHATPYKDLATSYKDHVTPYKHLATPYIDYAT---PYK 97
Query: 86 LILTPPKDIPF-YKD 99
+ TP KD+ YKD
Sbjct: 98 DLATPYKDLATPYKD 112
>SB_8332| Best HMM Match : PDZ (HMM E-Value=1.3e-17)
Length = 1038
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 46 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYR 85
Y H+ PY H+ Y + YAH Y Y YR
Sbjct: 761 YAHVYRPYAHVYRTYARVYRTYAHLYRTYAHGTEHMHVYR 800
>SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 46 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIPF-YKDGYYKN 104
Y+ + PY+ + PY G PY PYV + TV Y + P D+ Y D K
Sbjct: 216 YVDVTVPYVDVTVPYVDGTVPYVDVTVPYV-DVTV--PYVDVTVPYVDVTVPYIDVTLKP 272
Query: 105 NGIKI 109
GI +
Sbjct: 273 TGIPL 277
>SB_42467| Best HMM Match : Borrelia_orfA (HMM E-Value=1.7)
Length = 810
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 81 QDQYRLILTPPKDIPFYKDGYYKNNGIKIIKQKHNYDEDKYDF-------DFETENKIRA 133
+DQ RL+ + P D+ KD + K K D+D D DF+ + I
Sbjct: 128 EDQVRLLSSTPSDVS-NKDAAKVRKSSRPPKPKRFGDDDGMDTNLSSPKSDFDFQLPIAL 186
Query: 134 EEKAVLKNANSIDEGIASKG 153
E A +ANS+D ++ G
Sbjct: 187 ERAASTSSANSMDNPVSPDG 206
>SB_30758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 424
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 67 YAHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNN 105
Y + EP +GEAT++ R + PP + P Y Y N
Sbjct: 333 YLNRQEPGLGEATLRHLLRPRVDPPHEHPAYDYDYIHEN 371
>SB_22858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1404
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 54 IHIDNPYDGGFGPY-----AHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNNGIK 108
I+ +NP +G Y + +Y P++ + Q + PP+ P + + +
Sbjct: 276 IYDENPSPEAYGEYFLMNPSKEYAPFIHTMREKIQLSKVSVPPEGCPSFTEDSLLRHAQF 335
Query: 109 IIKQKHNYD 117
+++Q NYD
Sbjct: 336 LVEQIENYD 344
>SB_49176| Best HMM Match : Suf (HMM E-Value=0.6)
Length = 594
Score = 28.7 bits (61), Expect = 3.4
Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 8/110 (7%)
Query: 61 DGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIPFYKDGYYKNNGI--KIIKQKHNYDE 118
D GF + Y + + Y L P + + Y N K + N +E
Sbjct: 81 DSGFNNNMYKYGEFGSKDQGARTYTLQEEPMDGDDYTRGKLYGNMSYDRKYERGYENVNE 140
Query: 119 -DKYDFDFETENKIRAEEKAVL--KNANSIDEGI---ASKGFYEYIGPDG 162
D+YD D ET + E+ + +S D+G+ G Y+ GP G
Sbjct: 141 PDRYDADLETRYSVNPEDDVIFIANREDSPDDGVPINEGVGAYKNSGPGG 190
>SB_46762| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 31 HYGDSGKYIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
++ + YI T+ YI+I PYI+I+ PY Y PY+
Sbjct: 53 YFDTNWPYINTNR-PYININRPYININRPYINTSRAYFDTNWPYI 96
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 38 YIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
Y+ T+ YI+ PYI+ + PY PY + PY+
Sbjct: 11 YVNTNR-PYINTNRPYINTNRPYINTNRPYININRPYI 47
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 38 YIPTDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
YI T+ YI+I PYI+ Y PY + PY+
Sbjct: 32 YINTNR-PYININRPYINTSRAYFDTNWPYINTNRPYI 68
>SB_50655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2033
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 107 IKIIKQKHNYDEDKYDFDFETENKIRAEEKAVLK 140
++ +KQK N DE DFD E ++ R + A K
Sbjct: 768 VEDVKQKRNLDEGVGDFDVEEDDFFREPDSARAK 801
>SB_15415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1390
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 41 TDEGKYIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLIL--TPPKDIPF 96
T+ KY H N + I N G Y +G+ TV + R+ + +PP+DI F
Sbjct: 750 TNRNKYTHFNNGSLKIMNLEKEDTGKYMCTASNTLGKQTVMRRLRVQIPPSPPQDIAF 807
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Query: 46 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIP 95
Y +P+PY + +PY PY PY V Y+ + P K +P
Sbjct: 672 YKQVPHPYKQVPHPYKQVPAPYKQVPLPY---KQVPPPYKQVPHPYKQVP 718
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Query: 46 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYVGEATVQDQYRLILTPPKDIP 95
Y +P+PY + PY PY PY V Y+ + P K +P
Sbjct: 735 YKQVPHPYKQVPPPYKQVPPPYKQVPHPY---KQVPAPYKQVPAPYKQVP 781
>SB_3989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1283
Score = 27.9 bits (59), Expect = 5.9
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 14/90 (15%)
Query: 19 GVPVEDGKWHPYHYGDSGKYIPTDEGKYIH---IPNPYIHIDNPYDGGFGPYAHDYEPYV 75
G P DG PY D +I T G+ +H +P + NP GPY HD P++
Sbjct: 840 GPPRRDG---PYR--DEPGFIDTPMGRGMHQRDMPPEWHPAGNPRRVDEGPYMHDGPPHI 894
Query: 76 GEATVQDQYRLILTPPKDIPFYKDGYYKNN 105
+++ I P +IP G ++ +
Sbjct: 895 ------NRHPFIEQGPVEIPISHSGPWQGD 918
>SB_12552| Best HMM Match : Peptidase_S9_N (HMM E-Value=1.3e-09)
Length = 216
Score = 27.9 bits (59), Expect = 5.9
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 42 DEGKYIHIPNPYIHIDNPYDG---GFGPYAHDYE-PYVGEATVQDQYRLILTPPKDIPFY 97
DE I PYI +++P F +D PY+ E V+++++ LT D P Y
Sbjct: 20 DEYHGTKIAEPYIWLEDPDSDETKAFVKAQNDITLPYLAECEVREKFKDRLTELWDYPKY 79
Query: 98 ----KDG----YYKNNGIKIIKQKHNYDEDKYDFD---FETENKIRAEEKAVLKNANSID 146
K G Y+ N+G++ Q Y ++ D + F NKI+ + A L+
Sbjct: 80 GCPFKRGSRYFYFYNSGLQ--NQSVLYVQESLDGEAHVFLDPNKIKEDGTAALRGHTFSK 137
Query: 147 EG 148
+G
Sbjct: 138 DG 139
>SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 46 YIHIPNPYIHIDNPYDGGFGPYAHDYEPYV 75
Y+ + PY+ + PY G PY PYV
Sbjct: 216 YVDVTVPYVDVTVPYVDGTVPYVDVTVPYV 245
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 91 PKDIPFYKDGYYKNNGIKIIKQKHN 115
P D+ F YY NNG K KQ+H+
Sbjct: 139 PGDLVFITATYYVNNGKKWKKQRHD 163
>SB_28335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1051
Score = 27.5 bits (58), Expect = 7.8
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 111 KQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGI 149
+QK N +KYDF +NK++ + +++ KN ++ +
Sbjct: 354 EQKLNELMEKYDFTLGDKNKLQEDFESMKKNKEEVEAAL 392
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 27.5 bits (58), Expect = 7.8
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 127 TENKIR--AEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVDYTADENGFRPKVKRLE 184
TEN R A E A+ KNAN D+ K + DG R D +E K + +
Sbjct: 540 TENNARENARENALEKNANGYDKKTEKKKLEKLDRKDGGNERSDSDDEEKDLESKDEEND 599
Query: 185 TPYS 188
Y+
Sbjct: 600 IDYA 603
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.141 0.441
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,217,844
Number of Sequences: 59808
Number of extensions: 412898
Number of successful extensions: 1105
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1006
Number of HSP's gapped (non-prelim): 93
length of query: 197
length of database: 16,821,457
effective HSP length: 79
effective length of query: 118
effective length of database: 12,096,625
effective search space: 1427401750
effective search space used: 1427401750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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