GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002664-TA|BGIBMGA002664-PA|IPR000618|Insect cuticle
protein
         (197 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    36   0.001
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    31   0.031
AF043442-1|AAC05667.1|  231|Anopheles gambiae putative pupal-spe...    31   0.031
AF043441-1|AAC05666.1|  231|Anopheles gambiae putative pupal-spe...    31   0.031
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    31   0.031
AF043438-1|AAC05663.1|  231|Anopheles gambiae putative pupal-spe...    31   0.031
AF043437-1|AAC05662.1|  239|Anopheles gambiae putative pupal-spe...    31   0.031
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    31   0.031
AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific cut...    31   0.031
AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    31   0.031
AF043433-3|AAC05658.1|  231|Anopheles gambiae putative pupal-spe...    31   0.031
AF043433-2|AAC05657.1|  239|Anopheles gambiae putative pupal-spe...    31   0.031
AF043433-1|AAC05656.1|  231|Anopheles gambiae putative pupal-spe...    31   0.031
AF043439-1|AAC05664.1|  239|Anopheles gambiae putative pupal-spe...    30   0.054
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.0  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   3.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   8.1  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 140 KNANSIDEGIASKGFYEYIGPDGFMYRVDYTAD-ENGFRPKVKRLETPYSGKWIL 193
           K+     +G   +G Y  + PDG    VDYTAD  NGF   V+R   P + K I+
Sbjct: 38  KSQQESRDGDVVQGSYSVVDPDGTKRTVDYTADPHNGFNAVVRR--EPLAAKTIV 90


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 80  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 135

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 136 YHADHHTGFNAVVRR 150


>AF043442-1|AAC05667.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043441-1|AAC05666.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043438-1|AAC05663.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043437-1|AAC05662.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 80  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 135

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 136 YHADHHTGFNAVVRR 150


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 104 IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 159

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 160 YHADHHTGFNAVVRR 174


>AF043435-1|AAC05660.1|  231|Anopheles gambiae pupal-specific
           cuticular protein CP2b protein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 80  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 135

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 136 YHADHHTGFNAVVRR 150


>AF043433-3|AAC05658.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 128 YHADHHTGFNAVVRR 142


>AF043433-2|AAC05657.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 239

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 80  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHQRIVD 135

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 136 YHADHHTGFNAVVRR 150


>AF043433-1|AAC05656.1|  231|Anopheles gambiae putative
           pupal-specific cuticular proteinprotein.
          Length = 231

 Score = 30.7 bits (66), Expect = 0.031
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +KN +    G    G Y  +  DG    VD
Sbjct: 72  IIKSVEHHAPANYEFSYSVHD----EHTGDIKNQHETRHGDEVHGQYSLLDSDGHQRIVD 127

Query: 169 YTADEN-GFRPKVK 181
           Y AD + GF   V+
Sbjct: 128 YHADHHTGFNAVVR 141


>AF043439-1|AAC05664.1|  239|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2b protein.
          Length = 239

 Score = 29.9 bits (64), Expect = 0.054
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)

Query: 109 IIKQKHNYDEDKYDFDFETENKIRAEEKAVLKNANSIDEGIASKGFYEYIGPDGFMYRVD 168
           IIK   ++    Y+F +   +    E    +K+ +    G    G Y  +  DG    VD
Sbjct: 80  IIKSVEHHAPANYEFSYSVHD----EHTGDIKSQHETRHGDEVHGQYSLLDSDGHHRIVD 135

Query: 169 YTADEN-GFRPKVKR 182
           Y AD + GF   V+R
Sbjct: 136 YHADHHTGFNAVVRR 150


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 149  IASKGFYEYIGP--DGFMYRVDYTADENGFRPKVKRLETPYSGKWILEK 195
            IA+   YEY  P  DG ++++ Y    N +  K+K ++ P +     +K
Sbjct: 953  IANFDTYEYDMPTKDGDVFKLHYKVQNNKYVLKLKSMKGPLNNSLTEQK 1001


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 3.5
 Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 1/36 (2%)

Query: 153 GFYEYIGPDGFMYRVDYTADENGFRPKVKRLETPYS 188
           G + + GP G ++R+  T +  G+R  ++R   PY+
Sbjct: 115 GCFSWHGP-GPLFRIKGTLNLEGYRKILRRKMLPYA 149


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 22.6 bits (46), Expect = 8.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query: 76  GEATVQDQYRLILTPPKDIPFYKDGYYKNNGIKIIKQ 112
           G    +D +RL L   + +P+  DG+ + N  + +++
Sbjct: 195 GYDAAKDGHRLELVAEQSVPYNYDGWVELNATQAMQR 231


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.317    0.141    0.441 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,167
Number of Sequences: 2123
Number of extensions: 12439
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 17
length of query: 197
length of database: 516,269
effective HSP length: 61
effective length of query: 136
effective length of database: 386,766
effective search space: 52600176
effective search space used: 52600176
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 46 (22.6 bits)