GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002663-TA|BGIBMGA002663-PA|IPR004117|Olfactory receptor,
Drosophila
         (252 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               21   8.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 1/26 (3%)

Query: 181 FGI-YNQMVNNLNLDTFNCGMLWMAV 205
           FG+ Y     ++ LDT  C M W  +
Sbjct: 193 FGVVYENKNGSVILDTARCSMKWTLI 218


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)

Query: 228 DLKTRDDMQTERLRKYLTHYEIIL 251
           +L   +D+    ++KYLT+Y   +
Sbjct: 56  ELLQEEDISEGNIKKYLTNYSCFI 79


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/52 (23%), Positives = 24/52 (46%)

Query: 177 IYQSFGIYNQMVNNLNLDTFNCGMLWMAVGQLQILKTKFVNFKLNDIENSLD 228
           I    G+   ++ + ++ T+   +L   VGQLQ+        K+N ++   D
Sbjct: 109 IRMKHGLIRDLIVDRDVPTWEVNILKSIVGQLQVDTQGENAVKVNSVQVPTD 160


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.330    0.142    0.443 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,722
Number of Sequences: 429
Number of extensions: 3535
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 4
Number of HSP's gapped (non-prelim): 3
length of query: 252
length of database: 140,377
effective HSP length: 56
effective length of query: 196
effective length of database: 116,353
effective search space: 22805188
effective search space used: 22805188
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.8 bits)
S2: 43 (21.4 bits)