GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002662-TA|BGIBMGA002662-PA|undefined
         (214 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   4.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   5.6  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 107 IFDGVPETPKVGTEISNS 124
           +FD  P  P VG+E+  +
Sbjct: 34  VFDDPPREPTVGSEVKRT 51


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query: 107 IFDGVPETPKVGTEISNS 124
           +FD  P  P VG+E+  +
Sbjct: 34  VFDDPPREPTVGSEVKRT 51


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)

Query: 52  YWESDKKELNNNNQQFIDLYLED 74
           +W+ DK      N Q+ID+ L++
Sbjct: 103 FWDVDKWRTLFTNLQYIDINLQN 125


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/22 (40%), Positives = 11/22 (50%)

Query: 191 SKLYPSTVGEEAQEPLNKPNTE 212
           S + P T  E  + P N P TE
Sbjct: 26  SSILPETALEAPKSPENHPETE 47


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.312    0.132    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,650
Number of Sequences: 317
Number of extensions: 1630
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of query: 214
length of database: 114,650
effective HSP length: 54
effective length of query: 160
effective length of database: 97,532
effective search space: 15605120
effective search space used: 15605120
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)
S2: 41 (20.6 bits)