GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002661-TA|BGIBMGA002661-PA|IPR000152|Aspartic acid and
asparagine hydroxylation site, IPR013032|EGF-like region,
IPR000742|EGF-like, type 3, IPR001881|EGF-like calcium-binding,
IPR002172|Low density lipoprotein-receptor, class A,
IPR000033|Low-density lipoprotein receptor, YWTD repeat,
IPR002016|Haem peroxidase, plant/fungal/bacterial, IPR008197|Whey
acidic protein, core region, IPR006210|EGF, IPR006209|EGF-like,
IPR013091|EGF calcium-binding, IPR011061|Antihaemostatic protein
         (766 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...   134   3e-33
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...   132   1e-32
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   1.7  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   4.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   5.3  

>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score =  134 bits (324), Expect = 3e-33
 Identities = 56/84 (66%), Positives = 63/84 (75%)

Query: 670 FNGKDVEAITSTHTLQNPMVIHVYHPYRQPDGVNHCAAVNGHCSHLCLPAPRFGPNSPRV 729
           F G+ VEA+ S   L+ PMV+HVYHPYRQPDG+N C AVNGHCSHLCLPAPR    SP +
Sbjct: 1   FTGQSVEAVMSLRALKYPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKSPLL 60

Query: 730 SCACPNGLKLLPDDQMCVEDSKYH 753
           SCACP+GLKLL D  MCVE    H
Sbjct: 61  SCACPDGLKLLSDGLMCVEKDSIH 84



 Score = 28.7 bits (61), Expect = 0.19
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 7/50 (14%)

Query: 352 GENECEKNNGGCSQRCVDTP-IG-----YYCDCEKGYKLI-DNRTCEDID 394
           G N+C+  NG CS  C+  P I        C C  G KL+ D   C + D
Sbjct: 32  GMNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMCVEKD 81


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score =  132 bits (319), Expect = 1e-32
 Identities = 56/87 (64%), Positives = 64/87 (73%)

Query: 670 FNGKDVEAITSTHTLQNPMVIHVYHPYRQPDGVNHCAAVNGHCSHLCLPAPRFGPNSPRV 729
           F G+ VEA+ S   L+ PMV+HVYHPYRQPDG+N C AVNGHCSHLCLPAPR    SP +
Sbjct: 1   FTGQSVEAVMSLRALKYPMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAPRINSKSPLL 60

Query: 730 SCACPNGLKLLPDDQMCVEDSKYHFLP 756
           SCACP+GLKLL D  MCVE      +P
Sbjct: 61  SCACPDGLKLLSDGLMCVEKVSTTIVP 87



 Score = 27.5 bits (58), Expect = 0.43
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 6/42 (14%)

Query: 352 GENECEKNNGGCSQRCVDTP-IG-----YYCDCEKGYKLIDN 387
           G N+C+  NG CS  C+  P I        C C  G KL+ +
Sbjct: 32  GMNQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSD 73


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 205 CDGDVDCADGSDEVGCVST--PKVRSPCISTEFECNDRITC 243
           C+    C    D+  C  T   K+R P  +  +ECN R  C
Sbjct: 440 CNSKTKCCFAQDDGLCPYTLKHKIRVPPGTPIYECNKRCNC 480


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 10/70 (14%)

Query: 376 CDCEKGYKL-IDNRTCED-----IDECADPGSCSQICINEK----GTFKCECHTGYARDP 425
           C C+ GY+  ++ + C +         A   SC     + K    G  +C C  GY R  
Sbjct: 247 CHCKPGYQADVEKQECTECPIGKFKHEAGSHSCEACPAHSKSSDYGFTECRCDPGYFRAE 306

Query: 426 RDRTRCKATE 435
           +D  +   T+
Sbjct: 307 KDPKKMPCTQ 316


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 494 PIDEGTQRTVVIGEQLITSDGL 515
           P+ + T+  +++GEQ    DGL
Sbjct: 414 PLHDATRDVILVGEQARAQDGL 435


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.137    0.473 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,234
Number of Sequences: 429
Number of extensions: 12638
Number of successful extensions: 32
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 27
Number of HSP's gapped (non-prelim): 7
length of query: 766
length of database: 140,377
effective HSP length: 63
effective length of query: 703
effective length of database: 113,350
effective search space: 79685050
effective search space used: 79685050
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)