GeneModel BLAST Result against celegans

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002659-TA|BGIBMGA002659-PA|IPR001279|Beta-lactamase-like
         (153 letters)

Database: celegans 
           27,539 sequences; 12,573,161 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40953-4|AAB52649.2|  421|Caenorhabditis elegans Hypothetical pr...    98   2e-21
U39744-2|AAK18883.2|  362|Caenorhabditis elegans Hypothetical pr...    89   1e-18
U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical p...    75   3e-14
U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical pr...    75   3e-14
U80836-8|AAL32206.2|  212|Caenorhabditis elegans Hypothetical pr...    74   5e-14
U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical p...    71   4e-13
U80453-12|AAN63454.1|  419|Caenorhabditis elegans Hypothetical p...    70   8e-13
Z81039-5|CAB02776.1|  361|Caenorhabditis elegans Hypothetical pr...    37   0.006
AL132949-33|CAB61094.1|  295|Caenorhabditis elegans Hypothetical...    37   0.006
Z68493-5|CAA92800.1|  237|Caenorhabditis elegans Hypothetical pr...    31   0.27 
U12964-6|AAM29681.1|  329|Caenorhabditis elegans Hypothetical pr...    29   1.5  
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ...    29   1.9  
U37430-6|AAB52672.1|  414|Caenorhabditis elegans Hypothetical pr...    28   3.4  
AF068713-17|AAC17790.1|  155|Caenorhabditis elegans Hypothetical...    27   4.5  
Z75547-10|CAA99905.4|  394|Caenorhabditis elegans Hypothetical p...    27   5.9  
AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical ...    27   5.9  
Z92786-3|CAB63202.1|  488|Caenorhabditis elegans Hypothetical pr...    27   7.8  
U80840-11|AAB37935.3|  392|Caenorhabditis elegans Hypothetical p...    27   7.8  
L07144-7|AAK21444.2|  646|Caenorhabditis elegans Hypothetical pr...    27   7.8  

>U40953-4|AAB52649.2|  421|Caenorhabditis elegans Hypothetical
           protein F53B1.6 protein.
          Length = 421

 Score = 98.3 bits (234), Expect = 2e-21
 Identities = 49/143 (34%), Positives = 83/143 (58%), Gaps = 4/143 (2%)

Query: 12  ALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDKGEAYK 71
           +L+ + + P  ++ VVSTHGH DHVG  + F +A H  G+    R K+ +    + +   
Sbjct: 268 SLEMHGLSPADVDIVVSTHGHPDHVGGVHDFPDALHYHGWYSHQRTKFNLTALFENDTMN 327

Query: 72  INDSVKVIPTPGHTQSDVTVI--ATTRRGEAIAITGDLFERREDIENPSIWLEAGSEDPV 129
           ++++V ++   GHT  D+ V+     RRG+ + ++GDLF R EDI++P +W +  S D +
Sbjct: 328 LSENVMLVKCRGHTSDDIGVVVRGVKRRGD-VLVSGDLFMREEDIDHPMMW-QPLSADVI 385

Query: 130 QQMKNRSKVADSASWIVPGHGAI 152
            Q  +R +      WIVPGHG++
Sbjct: 386 AQRDSRRRYGCIVDWIVPGHGSM 408


>U39744-2|AAK18883.2|  362|Caenorhabditis elegans Hypothetical
           protein C03F11.2 protein.
          Length = 362

 Score = 89.0 bits (211), Expect = 1e-18
 Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 5/143 (3%)

Query: 13  LQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMH-PFDKGEAYK 71
           +    ++P  I YVV+THGH DH G  N F NA+H  G S  + +  F+       +  +
Sbjct: 37  IASRNIVPGEIQYVVTTHGHPDHFGQGNFFPNARHFFG-SYEYSDTNFISTELHTKDIMQ 95

Query: 72  INDSVKVIPTPGHTQSDVTV-IATTRRGEAIAITGDLFERREDI-ENPSIWLEAGSEDPV 129
           +  +V++  TPGHT  DVTV +        IA+ GDLF   ED  E   IW +  + +P+
Sbjct: 96  LTKNVQLWNTPGHTAQDVTVMVHNVSCCGIIAVAGDLFYNEEDANEAAGIWFQE-AWNPI 154

Query: 130 QQMKNRSKVADSASWIVPGHGAI 152
               +R+KV   A +++PGHG +
Sbjct: 155 IGKISRNKVICYADYVIPGHGKL 177


>U80453-10|AAN63453.1|  489|Caenorhabditis elegans Hypothetical
           protein C23H3.9b protein.
          Length = 489

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 4/149 (2%)

Query: 5   DADKIKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPF 64
           D +++ ++L +  +  + I+ VV TH    H+GN N F   K I+  S+ +  ++     
Sbjct: 313 DTERLLHSLAKESVTLDQIDSVVITHASPGHMGNMNFFAQ-KPILYHSMEYIGRHVTPTE 371

Query: 65  DKGEAY-KINDSVKVIPTPGHTQSDVTVIATTRRGEA-IAITGDLFERREDI-ENPSIWL 121
            K   Y K++ +V+V  TPGHTQ D++V+     G   +AI GDL      + E   + +
Sbjct: 372 LKERPYRKLSGNVEVWKTPGHTQHDLSVLVHNVAGYGTMAIVGDLIPSEHLLSEKRDVMI 431

Query: 122 EAGSEDPVQQMKNRSKVADSASWIVPGHG 150
           E G  D   + +N + +   A WIVPGHG
Sbjct: 432 EEGVWDNAIKRQNANLIVCMADWIVPGHG 460


>U80453-9|AAT81206.1|  432|Caenorhabditis elegans Hypothetical
           protein C23H3.9d protein.
          Length = 432

 Score = 74.5 bits (175), Expect = 3e-14
 Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 4/149 (2%)

Query: 5   DADKIKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPF 64
           D +++ ++L +  +  + I+ VV TH    H+GN N F   K I+  S+ +  ++     
Sbjct: 256 DTERLLHSLAKESVTLDQIDSVVITHASPGHMGNMNFFAQ-KPILYHSMEYIGRHVTPTE 314

Query: 65  DKGEAY-KINDSVKVIPTPGHTQSDVTVIATTRRGEA-IAITGDLFERREDI-ENPSIWL 121
            K   Y K++ +V+V  TPGHTQ D++V+     G   +AI GDL      + E   + +
Sbjct: 315 LKERPYRKLSGNVEVWKTPGHTQHDLSVLVHNVAGYGTMAIVGDLIPSEHLLSEKRDVMI 374

Query: 122 EAGSEDPVQQMKNRSKVADSASWIVPGHG 150
           E G  D   + +N + +   A WIVPGHG
Sbjct: 375 EEGVWDNAIKRQNANLIVCMADWIVPGHG 403


>U80836-8|AAL32206.2|  212|Caenorhabditis elegans Hypothetical
           protein B0432.9 protein.
          Length = 212

 Score = 73.7 bits (173), Expect = 5e-14
 Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 4   WDADKIKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHI----VGFSISFREKY 59
           W+  +I   LQ+  + P  + +VV THGH DH  N  LF  A  I    VG     + KY
Sbjct: 41  WNGLEIVQKLQELHVAPSTVTHVVVTHGHLDHCANLGLFQEASVIMDWDVGRKCGGKAKY 100

Query: 60  FMHPFDKGEAYKINDSVKVIPTPGHTQSDVTVIATTRRGEA---IAITGDLFERREDIEN 116
            + P   G  Y+I+D++++    GHT SD   I + + G +   +  +GDL E  +D++N
Sbjct: 101 SVIP---GWPYRISDNLELQNLSGHTASDTIAIVSGKIGNSKKIVVYSGDLIEDFQDLKN 157

Query: 117 PSIWLEAGSEDPVQQMKNRSKVADSASWIVPGHGA 151
               LE   E+P   + +   +  +   I+PGHGA
Sbjct: 158 FDP-LEL-LENPSDLLISHEYIFGAGDVIIPGHGA 190


>U80453-11|AAN63452.2|  503|Caenorhabditis elegans Hypothetical
           protein C23H3.9a protein.
          Length = 503

 Score = 70.9 bits (166), Expect = 4e-13
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 5/146 (3%)

Query: 9   IKNA-LQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDKG 67
           +KN  L +  +  + I+ VV TH    H+GN N F   K I+  S+ +  ++      K 
Sbjct: 330 VKNTCLAKESVTLDQIDSVVITHASPGHMGNMNFFAQ-KPILYHSMEYIGRHVTPTELKE 388

Query: 68  EAY-KINDSVKVIPTPGHTQSDVTVIATTRRGEA-IAITGDLFERREDI-ENPSIWLEAG 124
             Y K++ +V+V  TPGHTQ D++V+     G   +AI GDL      + E   + +E G
Sbjct: 389 RPYRKLSGNVEVWKTPGHTQHDLSVLVHNVAGYGTMAIVGDLIPSEHLLSEKRDVMIEEG 448

Query: 125 SEDPVQQMKNRSKVADSASWIVPGHG 150
             D   + +N + +   A WIVPGHG
Sbjct: 449 VWDNAIKRQNANLIVCMADWIVPGHG 474


>U80453-12|AAN63454.1|  419|Caenorhabditis elegans Hypothetical
           protein C23H3.9c protein.
          Length = 419

 Score = 69.7 bits (163), Expect = 8e-13
 Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 4/141 (2%)

Query: 13  LQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDKGEAY-K 71
           L +  +  + I+ VV TH    H+GN N F   K I+  S+ +  ++      K   Y K
Sbjct: 251 LAKESVTLDQIDSVVITHASPGHMGNMNFFAQ-KPILYHSMEYIGRHVTPTELKERPYRK 309

Query: 72  INDSVKVIPTPGHTQSDVTVIATTRRGEA-IAITGDLFERREDI-ENPSIWLEAGSEDPV 129
           ++ +V+V  TPGHTQ D++V+     G   +AI GDL      + E   + +E G  D  
Sbjct: 310 LSGNVEVWKTPGHTQHDLSVLVHNVAGYGTMAIVGDLIPSEHLLSEKRDVMIEEGVWDNA 369

Query: 130 QQMKNRSKVADSASWIVPGHG 150
            + +N + +   A WIVPGHG
Sbjct: 370 IKRQNANLIVCMADWIVPGHG 390


>Z81039-5|CAB02776.1|  361|Caenorhabditis elegans Hypothetical
           protein C25D7.5 protein.
          Length = 361

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 3/95 (3%)

Query: 23  INYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREK-YFMHPFDKGEAYKINDSVKVI-P 80
           I +VV T       GN NLF  ++ I+  +  +++   FM  F+K    ++     +I  
Sbjct: 157 IKFVVVTSSQPQFSGNLNLFPFSQFIMADATMYKDNIVFMKRFEKHSILELCSPNSLIQS 216

Query: 81  TPGHTQSDVTV-IATTRRGEAIAITGDLFERREDI 114
           TPG T + +TV I        IAI G LF    D+
Sbjct: 217 TPGPTPNSITVIIRNVDLMGTIAIAGALFPNGNDL 251


>AL132949-33|CAB61094.1|  295|Caenorhabditis elegans Hypothetical
           protein Y53F4B.39 protein.
          Length = 295

 Score = 37.1 bits (82), Expect = 0.006
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 23/141 (16%)

Query: 23  INYVVSTHGHSDHVGN-NNL---FLNAKHIVGFSISFREK----YFMHPFDKGEAYKIND 74
           I Y+V TH H DHVG  +N+    L+ K I  + +  R+K       H  D G    ++ 
Sbjct: 72  IEYIVITHWHGDHVGGIDNITDEILDKKKIPIYKMK-RDKDEGVERFHYVDDGFEVAVDG 130

Query: 75  -SVKVIPTPGHTQSDVTVIATTRRGEAIAITGDLFERREDIENPSIWLEAGSEDPVQQMK 133
            ++K+I TPGHT    ++     R      +GD        E  +++     ED    M 
Sbjct: 131 ATLKLIATPGHTADHFSLWLQEERA---LFSGDCILG----EGTTVF-----EDLHDYMT 178

Query: 134 NRSKVAD-SASWIVPGHGAIL 153
           +  K+ D +A+ I PGHG ++
Sbjct: 179 SLQKIKDLNATRIYPGHGPVI 199


>Z68493-5|CAA92800.1|  237|Caenorhabditis elegans Hypothetical
           protein C33A12.7 protein.
          Length = 237

 Score = 31.5 bits (68), Expect = 0.27
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 13/88 (14%)

Query: 25  YVVSTHGHSDHV-GNNNL---FLNAKHIVGF-SISFREKYFMHPFDKGEAYKIND-SVKV 78
           Y ++TH H+DH+ G N+L   F   K ++   S    +KY       GE  +I    ++V
Sbjct: 60  YGLNTHVHADHITGTNSLKTVFPTMKSVLSSKSGGEADKY----VSDGEIIEIGGLKLEV 115

Query: 79  IPTPGHTQSDVTVIATTRRGEAIAITGD 106
             TPGHT   +T +  + R    A TGD
Sbjct: 116 RETPGHTNGCLTYVEHSLRS---AFTGD 140


>U12964-6|AAM29681.1|  329|Caenorhabditis elegans Hypothetical
           protein F26F4.8 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 13/39 (33%), Positives = 19/39 (48%)

Query: 30  HGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDKGE 68
           H ++ H  N  + +  K     S+SFR+  F H F  GE
Sbjct: 126 HANTAHHVNGTVSIKCKDCSEVSVSFRKMLFHHTFKHGE 164


>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
           protein C48E7.6 protein.
          Length = 1764

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 9/23 (39%), Positives = 17/23 (73%)

Query: 111 REDIENPSIWLEAGSEDPVQQMK 133
           ++DIEN S+W    +ED ++++K
Sbjct: 732 QKDIENESVWYSVPNEDSIERLK 754


>U37430-6|AAB52672.1|  414|Caenorhabditis elegans Hypothetical
           protein K09F5.1 protein.
          Length = 414

 Score = 27.9 bits (59), Expect = 3.4
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 1/102 (0%)

Query: 7   DKIKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDK 66
           D+    L     + +A+ +      H D V   NL   A H V  ++    KY M     
Sbjct: 13  DRYIEYLTAGYKLTKALKWFSMQTAHMDLVQKENLLNYANHYVQSNMEEVRKYSMRILIN 72

Query: 67  GEAYKINDSVKVIPTPGHTQSDVTVIATTRRGE-AIAITGDL 107
            +A ++ D +            + ++  +R+ +    ++GDL
Sbjct: 73  HDAQRVEDIINTNAEESQKYDAIELVEDSRKNKLQDFVSGDL 114


>AF068713-17|AAC17790.1|  155|Caenorhabditis elegans Hypothetical
           protein T24A6.2 protein.
          Length = 155

 Score = 27.5 bits (58), Expect = 4.5
 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 37  GNNNLF-LNAKHIVGF---SISFREKYFMHPFDKGEAYKINDSVKVIPTPGHTQSDVTVI 92
           GN N + ++ K+ V F    + F +K++ + F KG+ Y+I D +  I  P  TQ D  + 
Sbjct: 66  GNENGYEMDMKNFVVFFCPGVIFGKKFYQNFFHKGDPYEIFD-ITQITFP--TQRDFCLF 122

Query: 93  ATT 95
            TT
Sbjct: 123 FTT 125


>Z75547-10|CAA99905.4|  394|Caenorhabditis elegans Hypothetical
           protein R11D1.10 protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 112 EDIENPSIWLEAGSEDPVQQMKNRSKV 138
           E I NP  WL++ S++P     N S++
Sbjct: 172 EVIRNPQSWLKSSSKEPAMNANNPSEL 198


>AL023828-5|CAA19450.1|  260|Caenorhabditis elegans Hypothetical
           protein Y17G7B.3 protein.
          Length = 260

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 23  INYVVSTHGHSDHVGNN----NLFLNAKHIVGFS-ISFREKYFMHPFDKGEAYKINDSVK 77
           I  V++TH H DH G N      F N   + G S I   +++  H  D  E   +   +K
Sbjct: 49  ITAVLTTHHHYDHCGGNEGFRRQFPNVMILGGDSRIPAMDRHVKHG-DMAEFAGL--QIK 105

Query: 78  VIPTPGHTQS----DVTVIATTRRGEAIAITGD 106
            + TP HT       +T  A       +  TGD
Sbjct: 106 CLSTPCHTSGHICYHITNPAADSTSPGVVFTGD 138


>Z92786-3|CAB63202.1|  488|Caenorhabditis elegans Hypothetical
           protein F47H4.6 protein.
          Length = 488

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 111 REDIENPSIWLEAGSEDPVQQMKNRSKV 138
           +E IE   +WLE    +PV+Q++   KV
Sbjct: 104 KELIEELKVWLEPAEAEPVKQVEINRKV 131


>U80840-11|AAB37935.3|  392|Caenorhabditis elegans Hypothetical
           protein F08D12.12 protein.
          Length = 392

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 24/121 (19%), Positives = 55/121 (45%), Gaps = 1/121 (0%)

Query: 9   IKNALQQNQMIPEAINYVVSTHGHSDHVGNNNLFLNAKHIVGFSISFREKYFMHPFDKGE 68
           +KN  +  Q  P+     V+T   S ++ ++     +   V FS   +++   H F    
Sbjct: 125 MKNIRELLQPPPKLAPLTVATSSSSTNLISSTNSKYSSPPVSFSNGKKQQRKDHQFRSPA 184

Query: 69  AYKINDSVKVIPTPGHTQSDVTVIATT-RRGEAIAITGDLFERREDIENPSIWLEAGSED 127
           A++I          G + S ++  +TT RR ++ A + D+ E+   ++  ++ + + + +
Sbjct: 185 AFQIMAGSSATDESGRSSSQMSNESTTPRRDDSPASSCDIKEQEVTMKLSAVSMSSRTSE 244

Query: 128 P 128
           P
Sbjct: 245 P 245


>L07144-7|AAK21444.2|  646|Caenorhabditis elegans Hypothetical
           protein R05D3.9 protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 7.8
 Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)

Query: 83  GHTQSDVTVIATTRRGEAIAITGDLFERREDIENPSIWLEAGSEDPVQQMKNRSKVADSA 142
           G    D   + + R G+    T    E   D+E    W+E      +Q++ N SK+++  
Sbjct: 320 GLNSEDYHTVVSYRNGQNTGKT----ENIGDVEFYENWVELSLSGAIQRLPNESKLSEFK 375

Query: 143 SWIVPG 148
             IV G
Sbjct: 376 KGIVGG 381


  Database: celegans
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 12,573,161
  Number of sequences in database:  27,539
  
Lambda     K      H
   0.316    0.132    0.393 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,924,829
Number of Sequences: 27539
Number of extensions: 151268
Number of successful extensions: 390
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 361
Number of HSP's gapped (non-prelim): 19
length of query: 153
length of database: 12,573,161
effective HSP length: 75
effective length of query: 78
effective length of database: 10,507,736
effective search space: 819603408
effective search space used: 819603408
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 56 (26.6 bits)