GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002658-TA|BGIBMGA002658-PA|IPR008516|Protein of unknown
function DUF798
         (426 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p pro...   115   1e-25
AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC...   109   7e-24
AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB...   109   7e-24
AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA...   109   7e-24
AE013599-3975|AAN16123.1|  381|Drosophila melanogaster CG32836-P...    39   0.015
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    36   0.14 

>AY051438-1|AAK92862.1|  452|Drosophila melanogaster GH10774p
           protein.
          Length = 452

 Score =  115 bits (277), Expect = 1e-25
 Identities = 53/126 (42%), Positives = 70/126 (55%), Gaps = 2/126 (1%)

Query: 23  QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMWMVWNIFLICY 82
           +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W+ WN FLIC+
Sbjct: 25  ERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICF 84

Query: 83  YLNLGTLNREXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTHVEGCHFQWYH 140
           YLN+G LNR+          VSW+E+NG+GC+P +     D     RP  VEGC   +  
Sbjct: 85  YLNVGQLNRDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLDYPL 144

Query: 141 VELGQS 146
           VE+  S
Sbjct: 145 VEITHS 150


>AE013599-3974|AAN16122.1|  661|Drosophila melanogaster CG9047-PC,
           isoform C protein.
          Length = 661

 Score =  109 bits (262), Expect = 7e-24
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 5/129 (3%)

Query: 23  QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMWMVWNIFLICY 82
           +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W+ WN FLIC+
Sbjct: 25  ERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICF 84

Query: 83  YLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTHVEGCHFQ 137
           YLN+G LNR   +          VSW+E+NG+GC+P +     D     RP  VEGC   
Sbjct: 85  YLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLD 144

Query: 138 WYHVELGQS 146
           +  VE+  S
Sbjct: 145 YPLVEITHS 153


>AE013599-3973|AAF47286.3|  661|Drosophila melanogaster CG9047-PB,
           isoform B protein.
          Length = 661

 Score =  109 bits (262), Expect = 7e-24
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 5/129 (3%)

Query: 23  QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMWMVWNIFLICY 82
           +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W+ WN FLIC+
Sbjct: 25  ERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICF 84

Query: 83  YLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTHVEGCHFQ 137
           YLN+G LNR   +          VSW+E+NG+GC+P +     D     RP  VEGC   
Sbjct: 85  YLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLD 144

Query: 138 WYHVELGQS 146
           +  VE+  S
Sbjct: 145 YPLVEITHS 153


>AE013599-3972|AAM70797.2|  661|Drosophila melanogaster CG9047-PA,
           isoform A protein.
          Length = 661

 Score =  109 bits (262), Expect = 7e-24
 Identities = 53/129 (41%), Positives = 70/129 (54%), Gaps = 5/129 (3%)

Query: 23  QRQVFDFLGYMWXXXXXXXXXXXXXXXGSFGAVQCITKYLIAYAVWSFMWMVWNIFLICY 82
           +RQVFDFLGYMW               G +GA     KY+I Y +W+F+W+ WN FLIC+
Sbjct: 25  ERQVFDFLGYMWAPILVNFFHILFIIFGFYGAYHFRVKYIITYLIWNFLWIGWNTFLICF 84

Query: 83  YLNLGTLNR---EXXXXXXXXXXVSWWESNGWGCQPEWGEL--DRPGLWRPTHVEGCHFQ 137
           YLN+G LNR   +          VSW+E+NG+GC+P +     D     RP  VEGC   
Sbjct: 85  YLNVGQLNRVSFDSDLLNLGTGSVSWFEANGYGCKPTYNMAADDTFRPQRPERVEGCLLD 144

Query: 138 WYHVELGQS 146
           +  VE+  S
Sbjct: 145 YPLVEITHS 153


>AE013599-3975|AAN16123.1|  381|Drosophila melanogaster CG32836-PA
           protein.
          Length = 381

 Score = 38.7 bits (86), Expect = 0.015
 Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 239 GSLPREP-RSRPTSAHSSYSNFHGTRPVS-YHVPRNEETVSEIVNNAYEPAPQVESVP 294
           G  P E   +RP S  SSYSNFHG+RP+S  +     E V   +N A    PQ    P
Sbjct: 251 GHAPDEVYNNRPPSVRSSYSNFHGSRPLSTAYGNATGENVFAGLNGASASPPQAPCTP 308


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 35.5 bits (78), Expect = 0.14
 Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 6/193 (3%)

Query: 178  TISRRPVYTIELSPAETNVSESSLKPMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
            T +RRP+ +I  +P+ T++  S  +P T                                
Sbjct: 834  TTTRRPLSSI--TPSYTSLRRS--RPTTVAPPAEESHEEAEQQTQTQVKSYATLSRTRGR 889

Query: 238  TGSLPREPRSRPTSAHSSYSNFHGTRPVSYHVPRNEETVSEIVNNAYEPAPQVESVPIVV 297
            T S P    + P+S  + Y  F  TRP       + E  +E     YE   Q + V +  
Sbjct: 890  TTSSPEVTEAAPSSTTNRYKYFERTRPTKSATAEDSEDPTEDEEEEYED-EQKDIVTVQS 948

Query: 298  NRN-NTIGRSSIKSSGYDVAGPYKEPKSVRTYDSKPLSNYDAKYDTNSARNYNTNVPTYD 356
             ++ NT   +SI            E  +  T  +       A   TN+  N N++  + +
Sbjct: 949  KQSTNTRKYASIGRRTTTTTTATPETTTTTTTTTAGTETAKASTTTNNNNNNNSHYNSSN 1008

Query: 357  NIENVYDRGQMNT 369
            N  NV    Q+ T
Sbjct: 1009 NNNNVKLNNQLPT 1021


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.316    0.134    0.435 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,004,780
Number of Sequences: 52641
Number of extensions: 696058
Number of successful extensions: 2099
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2085
Number of HSP's gapped (non-prelim): 8
length of query: 426
length of database: 24,830,863
effective HSP length: 87
effective length of query: 339
effective length of database: 20,251,096
effective search space: 6865121544
effective search space used: 6865121544
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 63 (29.5 bits)