Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002657-TA|BGIBMGA002657-PA|undefined
(256 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex ... 29 0.66
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 28 1.5
SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces pom... 27 2.0
SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase |Schi... 27 2.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 4.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.2
SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr 1||... 26 6.2
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 25 8.2
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 8.2
SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|ch... 25 8.2
>SPAC24H6.06 |sld3|mug175|DNA replication pre-initiation complex
subunit Sld3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 668
Score = 29.1 bits (62), Expect = 0.66
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 125 FIQKATFYTNESKPKSEKDEECTFALGRSKTSALLPGSVNLMDSSIFDNXXXXXXXXXXX 184
F +K T + + + + + T +L RSKT ++L GSV+ D+
Sbjct: 551 FTEKLTMASLQGQSEESVQPKTTSSLSRSKTLSILEGSVSKRSEPSMDSILVQATPRKSS 610
Query: 185 XVRTKL 190
V T+L
Sbjct: 611 SVITEL 616
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 27.9 bits (59), Expect = 1.5
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 187 RTKLSPNSRRAELNYDVKVFAEHGRHLNTTGILDDIPVPPRRKISPKHLVPNDSD-SNRE 245
+ K P+ E Y++ +E + ++ T +LD IP+ + K+S K LV S S+++
Sbjct: 265 KVKYDPHETNKESEYNLIGSSE--KTIDITDLLDSIPMNEQLKVSLKPLVSESSSISSKK 322
Query: 246 L 246
L
Sbjct: 323 L 323
>SPBC36.12c |git7||SGT1-like protein Git7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 91 VNT-SSFSCHLHTNGAFTLERSKSDVQAYKHCRT 123
+NT FSC H N A L + KSD +C++
Sbjct: 50 INTYKPFSCLKHANWALLLAKKKSDTGLIGYCQS 83
>SPAP7G5.04c |lys1||aminoadipate-semialdehyde dehydrogenase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1419
Score = 27.1 bits (57), Expect = 2.7
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 10/115 (8%)
Query: 23 AARAEDNVVKWVISLRECSY---EYLRNRLHTLQSKIFSITGKDPLLLVPRNEGACLWAP 79
A +ED VV + R+ + EYL+ +L + + PL +P N + P
Sbjct: 801 ATESEDIVVNGLKKYRKLIHDIREYLKTKLPSYAIPSVIV----PLHKMPLNPNGKIDKP 856
Query: 80 AVPFSTTPACTVNTSSFSCHLHTNGAFTLERSKSDV--QAYKHCRTEFIQKATFY 132
A+PF T + S S H ER D+ + H T+ +KA+F+
Sbjct: 857 ALPFPDTSQLAAASRSHSKHGVDETLTATERDIRDIWLRIIPHA-TDVNKKASFF 910
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 26.2 bits (55), Expect = 4.7
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 7/49 (14%)
Query: 57 FSITGKDPLLLVPRNEGAC----LWAPAVPFSTTPACTVNTSSFSCHLH 101
F + L+L NE C +W P VPF TT + ++FS LH
Sbjct: 2030 FEVVNASSLVL---NEYGCEHNTVWPPWVPFETTFDFVLTPAAFSRFLH 2075
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.8 bits (54), Expect = 6.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 128 KATFYTNESKPKSEKDEEC 146
K FY NES PK++ EC
Sbjct: 22 KCYFYVNESDPKAKPQWEC 40
>SPAC4F10.13c |mpd2||GYF domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 992
Score = 25.8 bits (54), Expect = 6.2
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 215 TTGILDDIPVP-PRRKISPKHLVPNDSDSNRELQTSSEDLI 254
T+G P P P + + PKHL D +RE+ +S + +
Sbjct: 614 TSGSQTTAPKPSPWKSLPPKHLPSLDETISREMSIASSEAL 654
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.4 bits (53), Expect = 8.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 128 KATFYTNESKPKSEKDEECTFALGRSKTSALLP 160
K + Y+N S K+E D++ L R+ A LP
Sbjct: 343 KRSQYSNPSPEKNENDDQILEHLARNSQKAQLP 375
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 8.2
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 118 YKHCRTEFIQKATFYTNESKPKSEKDEECTFALGRSKTSALLPGSV 163
+ H + F+Q AT+ P S K FA ALL G++
Sbjct: 556 FDHIDSSFVQLATYIDTSMIPSSLKPYLSVFAKYIEAAPALLSGTI 601
>SPAC806.04c |||DUF89 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 440
Score = 25.4 bits (53), Expect = 8.2
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 53 QSKIFSITGKDPLLLVPRNEGACLWAPAVPFSTTPACTVNTSSFSCHLHT 102
+S + GK+ +LL + G CLW PF T N + +C L T
Sbjct: 354 KSDMIFFKGKN-ILLYLKLTGDCLWPRTTPFGKTLGPIANAIN-ACALRT 401
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.130 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,199,423
Number of Sequences: 5004
Number of extensions: 48486
Number of successful extensions: 128
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 120
Number of HSP's gapped (non-prelim): 12
length of query: 256
length of database: 2,362,478
effective HSP length: 71
effective length of query: 185
effective length of database: 2,007,194
effective search space: 371330890
effective search space used: 371330890
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 53 (25.4 bits)
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