GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002657-TA|BGIBMGA002657-PA|undefined
         (256 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    26   0.93 
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    26   0.93 
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    25   1.6  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   6.5  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   8.6  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   8.6  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   8.6  

>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 61  GKDPLLLVPRNEGACLWAPAVPFSTTPACTVNTSSF 96
           G  P  +V RN G+CL+ P   F +T  C ++ + F
Sbjct: 105 GTYPTNVVVRNNGSCLYVPPGIFKST--CKIDITWF 138


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 0.93
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 61  GKDPLLLVPRNEGACLWAPAVPFSTTPACTVNTSSF 96
           G  P  +V RN G+CL+ P   F +T  C ++ + F
Sbjct: 137 GTYPTNVVVRNNGSCLYVPPGIFKST--CKIDITWF 170


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query: 212 HLNTTGILDDIPVPPRRKISPKHLVP 237
           ++  T I+D   V    K++P+HL+P
Sbjct: 27  NIKKTNIMDATDVAELTKVNPQHLIP 52


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 67  LVPRNEGACLWAPAVPFSTTPACTVNTSSF 96
           +V +N G+CL+ P   F +T  C ++ + F
Sbjct: 128 IVVKNNGSCLYVPPGIFKST--CKIDITWF 155


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 67  LVPRNEGACLWAPAVPFSTTPACTVNTSSF 96
           +V +N G+CL+ P   F +T  C ++ + F
Sbjct: 128 IVVKNNGSCLYVPPGIFKST--CKIDITWF 155


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 92  NTSSFSCHLHTNGAFTLERSKSDVQ 116
           ++S  SC    NG+ T  RS SD++
Sbjct: 651 SSSPASCSPEQNGSMTKTRSYSDIK 675


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)

Query: 92  NTSSFSCHLHTNGAFTLERSKSDVQ 116
           ++S  SC    NG+ T  RS SD++
Sbjct: 651 SSSPASCSPEQNGSMTKTRSYSDIK 675


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/15 (66%), Positives = 11/15 (73%)

Query: 237 PNDSDSNRELQTSSE 251
           PNDS SNR L +S E
Sbjct: 217 PNDSSSNRTLTSSWE 231


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.130    0.387 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,896
Number of Sequences: 2123
Number of extensions: 10001
Number of successful extensions: 71
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 65
Number of HSP's gapped (non-prelim): 8
length of query: 256
length of database: 516,269
effective HSP length: 63
effective length of query: 193
effective length of database: 382,520
effective search space: 73826360
effective search space used: 73826360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 47 (23.0 bits)